Cucumis sativus (cucumber): 116405167
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Entry
116405167 CDS
T02486
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
116405167
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
116405167
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Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
116405167
NCBI-ProteinID:
XP_031744817
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Position
7:2116946..2118607
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AA seq
397 aa
AA seq
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MGLALLPFFLLLASTIEAQSLFDVTRYGAKPNTDITQALANAWKEACMSTTPSKLLIPKG
VYQLSQSYLKGPCKSVPIQVQVDGTLKAPLHPNGDGLVLFAYIDQLMLSGTGVFDGQGKA
GWDKNDCHKKKICTKLPMNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISA
PENSPNTDGIHISSSEQINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLG
KYTKEKDVVGVSVKACKLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQ
EYCPWNQCNRKVPSKIKISKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG
IRGPILSECANVQPLITGKQSPQICAKPAPAGAPSTD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgggattggcattactacctttctttttattgttggcatctactattgaagcccaatcc
ctttttgatgttacaagatatggtgccaaacctaatacagatattactcaggccttagca
aatgcatggaaggaagcatgtatgtccacaactcctagtaaattgttgattccaaaagga
gtataccaattaagtcaatcttatcttaaaggaccttgcaagagtgttcctattcaagtc
caagtcgacggaacactaaaagctcctctccatccaaatggagatgggttggttcttttt
gcatacattgatcaactaatgttatcaggcacgggagtttttgatggtcaaggaaaagca
ggttgggataagaatgattgccacaaaaagaagatatgtaccaaacttcccatgaatttg
aagttcagtttcatcaccaattcaattgtgaaggacataacttccttggacagtaaaaat
ttccacatcaatcttttgggttgcaagaatgttacttttcaacacgtgacaatcagtgca
ccagagaatagtcccaacacggatggaattcacataagtagctctgaacagataaacatt
ctcgattcaaaaatctcaactggagatgattgtgtgtctgttggagatagcaacaagcaa
gtaactattactaatgtaacttgcggaccaggacatggcattagcgtaggaagcttgggc
aagtacaccaaggaaaaggacgtggtaggagttagtgtgaaagcatgcaaattaatcaat
actaccaacggtgttagaatcaaaacatggccagattctgccggtgcattcatagcctct
gacatgcactttgaagatattgagatgcaaaacgtgagcaaccctgtcattatagaccaa
gaatactgtccgtggaatcaatgcaacagaaaggttccatccaagattaagatcagcaaa
gtgagtttcaaaaatattagaggcacttctgctactcctatcgcagtgaagcttgtttgc
agcaaaagtataccatgtgaaggtgtagaagtcgctgatattaacctcacttatagtgga
atacgaggaccgattttgtctgaatgtgcaaacgtgcagcctctcattactggaaagcaa
agccctcaaatatgtgctaagcctgctcctgctggtgctccatcaacagactaa
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