Carlito syrichta (Philippine tarsier): 103250843
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Entry
103250843 CDS
T07836
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
csyr
Carlito syrichta (Philippine tarsier)
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csyr04040
]
103250843 (SCN11A)
Ion channels [BR:
csyr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103250843 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Motif
Other DBs
NCBI-GeneID:
103250843
NCBI-ProteinID:
XP_008047620
Ensembl:
ENSTSYG00000002653
UniProt:
A0A1U7SQ14
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MDDRCYPVIFPDARNFRPFTADSLAAIEKRISIQKEKKKSKEQTVEEPQPRPQLDLKASR
KLPKLYGDIPCELIAKPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFIFGPFNSVRS
LAIRISVHSLFSMFIICTVIINCVYIARGRGKDNPSTDTDSSEYVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIGTAIVSYLPKVNINLLSLRTFRVFRALKAISVVSGLK
VIVGALLRSVKKLVNVMILTLFCLSIFALIGQQLFMGSLNQKCIRKDCENISNIEAHDSC
FEKKGNSTEFKMCGPWMGIRACSSEFKCNHTTINPDYGYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLLTAGLYSVFFFILVIFLGSFYLINLTLAVVTMAYEEQNKNVAAETEAKEKM
FQEAQQLLKEEKEALVAMGIDRSSLTSLEASSFSPKKRKLFGNKKRTSFFLRESGKDQAP
GSDSEEDSKKKPHLLEQTKRLSQNLSMDHFDEHRDPFQRQRALSAVSILTITMQEQEKSQ
EPCLPCGEKLLSKYLVWDCSPQWLCIKKVLRTVMTDPFIELAITICIIINTIFLAMEHHR
MQPFFETMLNTGNLVFTGIFIAEMCLKIIALDPYHYFRRGWNIFDSIVALLSFADVLYSI
FEKKSWPFLRSFRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVVGM
QLFGAQFSSQKSNKSCDPTSSCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEANAP
LCVIVFVLIMVIGKLVVLNLFIALLLNSFSNEERDGNLEGEARKTKVQLALNRFHRAFCF
VMHTVEHFFRKRCRRQTLPKQKEVTGGPTAESKDMIPLVTEMKRGPEIQEEFGGLTSAPK
TLGIGHDRTWLAPLAEEEDDVEFPGEDNVQPITKSEAKIQACELHQETKKSTSPGVQSVE
IDMFSEDDAYLTVQNSRKKSDATSMLSECSTIDLQDTCGQLPEMLPKKEPERCLPKGLGC
CFPCCSMDKRKSPWVIWWNLRKTCHKIVKHSWFESFIIFVILLSSGALVFEDIYLHQQPK
IQALLNCTDIIFTYIFILEMGLKWVAFGFGKYFTSAWCWLDFIIVIVSVTSLIDLKSLKS
FRTLRALRPLRALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFG
RCINGTDLVINYSIIANRNQCESNNLYWDNPKVNFDNVGKAYLALLQVATFKGWMDIMYA
AVDSRGKEQQPAFENNSIMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQQKKI
NT seq
3940 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtgatcttcccagacgcacggaatttccgccccttcact
gctgattctctggctgcaattgagaagcggatctccatccaaaaggagaaaaagaagtct
aaagagcagacagtggaagaaccccagcctcggcctcagcttgacctgaaggcctccagg
aagttgcccaagctctatggagacattccctgtgagctgatagcaaagcccctggaagac
ttggacccattctacagaaatcataagacatttatggtgttgaataaaaagagaacaatc
taccgcttcagtgccaagcgtgccttgtttatttttgggcccttcaattcagtcagaagt
ttggccattagaatctcagttcattccttgttcagcatgttcatcatctgcaccgttatc
atcaactgtgtgtacattgctagagggcgtggtaaggacaaccccagcacagatactgac
agttccgagtatgtcttcactgggatttatatttttgaagctttgataaaaatattggca
agaggttttatcctggatgagttttctttccttcgagatccatggaactggctggactct
attgtcattggaacagcgattgtgtcctatcttccaaaagtcaacatcaatctgctgtcc
ttgagaaccttccgagtgttcagagctttgaaagcaatctcagtagtttcaggtctgaag
gtcattgtcggagccctgctgcgctctgtgaagaagcttgtcaacgtgatgatcctgacc
ctcttttgcctcagcatctttgccctgataggtcagcaactcttcatggggagtctgaac
cagaaatgtatcaggaaagactgtgaaaatatcagcaatattgaagctcatgacagttgc
tttgaaaagaaaggaaattccactgaattcaaaatgtgtggcccctggatgggtatcaga
gcctgttccagcgaatttaaatgcaaccacaccacaattaatcctgactatggttacacg
aattttgacaactttggctggtcttttcttgccatgttccggcttatgacccaagattcc
tgggagaaactttatcaacagaccctgctcactgctgggctctactcagtcttcttcttc
atactggtcatcttcctgggctctttctatctgattaacttaaccctggctgtcgtcacc
atggcttatgaggaacagaacaagaatgtagctgcagaaacagaggccaaggaaaagatg
tttcaggaagcccagcagctattaaaggaggagaaagaggctctggttgccatgggaatt
gacagaagttcacttacttctcttgaagcatcatctttttccccaaaaaagagaaagctc
tttggaaataagaaaagaacatctttctttttgagagagtctgggaaagaccaggctcca
ggatcagattctgaagaagattcaaaaaaaaagccacatctccttgagcaaactaaacga
ctgtcccagaatctgtcaatggatcactttgatgagcacagagatcccttccaaaggcag
agggcactgagtgctgtcagcatcctcaccatcaccatgcaggaacaagaaaaatcacag
gagccttgtctcccttgtggggaaaagctgttatccaagtatctcgtgtgggactgtagc
ccccagtggctatgcattaagaaggtcctgagaaccgtgatgaccgacccctttattgag
ctggccatcaccatctgcatcataatcaacactatcttcttggccatggagcatcacaga
atgcaacccttttttgaaactatgttgaatacagggaatttggttttcactggcattttt
atagcagagatgtgcctaaaaatcattgcacttgatccctaccactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagctttgcagatgtactgtacagtata
tttgaaaaaaaaagctggccattcttgcgttccttcagagtgctgagggtcttcaagtta
gccaaatcctggccaactttaaacacgctaattaagataatcggccattccgttggagcc
cttggaaacttgactgtggtcctggccattgtggtctttatattctcagtagtcggcatg
cagctttttggtgctcaattcagttcccaaaagagtaacaaatcctgtgaccctacatcc
tcatgtttacgacgctggcacatgggggatttctatcactccttcctagtggtatttcgc
atcctctgtggagaatggatcgaaaacatgtgggaatgtatgcaggaagcaaatgcacca
ttgtgtgttattgtctttgtgttgatcatggtgataggaaaacttgtggtgctcaacctc
ttcattgctttactgctcaattcctttagtaacgaggagagagatggaaacttagaagga
gaggccaggaaaactaaagtccagttagccctgaataggttccaccgggctttctgtttt
gtgatgcatactgttgagcatttctttcgcaagcggtgcaggagacaaacattaccaaag
caaaaagaggtaacaggaggacctactgcagaaagtaaagacatgattcccctggtcaca
gagatgaaaaggggcccagagatccaggaagagtttggtggattaacctctgcaccaaag
acactgggcattgggcacgatcgaacttggttggccccacttgcagaggaagaagatgat
gtggaatttcctggtgaagataatgtacaaccaatcacaaaatctgaggctaaaatacag
gcctgtgaacttcatcaggagaccaaaaaatccaccagcccaggagttcaaagtgtggaa
attgatatgttctctgaagatgatgcttatctgactgtacagaattcccgaaagaagtct
gatgctaccagtatgctatcagaatgtagcaccattgatcttcaggatacctgtggacag
ttacctgagatgcttcccaaaaaggaaccagagagatgtttacccaaaggcctgggatgc
tgcttcccatgctgcagcatggacaagagaaagtccccctgggtcatttggtggaacctg
cggaaaacctgccacaaaatagtgaaacacagctggtttgagagctttattatctttgtg
attctgctgagcagtggggcactggtatttgaagatatttaccttcatcaacaacccaaa
atccaagcattactaaattgtactgacattattttcacatatattttcatcctggagatg
ggtctgaaatgggtggcctttggatttggaaagtatttcaccagtgcctggtgctggctc
gatttcatcattgtgattgtctctgtgaccagcctcattgacttaaagagcttgaagtcc
ttccggaccctacgagcactgaggcctcttcgtgcgctgtctcagtttgaaggaatgaag
gtggtggtcaatgctctcataggtgccattcctgccattctgaatgttttgcttgtctgc
ctcattttctggctcatattttgtatcctgggagtaaacttcttttctggaaaatttgga
agatgcattaatggaacagacttagttataaattacagcattattgcaaaccgaaaccaa
tgtgaaagtaacaatttatactgggacaatccgaaagtcaactttgacaatgtggggaag
gcttacctcgctctactccaagtggcaacatttaagggctggatggatattatgtatgca
gctgttgattccagagggaaagaacaacagccagcgtttgagaataattctatcatgtac
ctttacttcgtagtttttatcatctttggctcattctttactctgaatctctttattggt
gttattattgacaacttcaaccagcagcagaaaaagataa
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