Clostridium taeniosporum: BGI42_05820
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Entry
BGI42_05820 CDS
T04957
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ctae
Clostridium taeniosporum
Pathway
ctae03030
DNA replication
ctae03430
Mismatch repair
ctae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BGI42_05820 (polC)
03430 Mismatch repair
BGI42_05820 (polC)
03440 Homologous recombination
BGI42_05820 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctae03032
]
BGI42_05820 (polC)
03400 DNA repair and recombination proteins [BR:
ctae03400
]
BGI42_05820 (polC)
Enzymes [BR:
ctae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BGI42_05820 (polC)
DNA replication proteins [BR:
ctae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BGI42_05820 (polC)
DNA repair and recombination proteins [BR:
ctae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BGI42_05820 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
HHH_3
DEDDh_C
Zn-ribbon_8
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AOR24914
UniProt:
A0A1D7XNM4
LinkDB
All DBs
Position
1220753..1225111
Genome browser
AA seq
1452 aa
AA seq
DB search
MVLISQDLIKQLTKEINKNENLENKEIRLLRFQFYKKSQILKVVLKSLESLTSQEEEYLK
KLIIDNLGFHINIEFLCYLDVSNTSLEEINSKYWVNVAEEIAKKYPLCRSILYSKNRKVK
EKVINIYSGNETLINHALNKKIDKLLQNNIKDMFSFSATVNFSFDSSLLVTEEYEASKKE
ENLKIIKEVMNGRTVTSESSGLKANKTQRSNNNGYRKNDNKSNYASYKREPKDENTILGR
GIRTESTPIKDIDETTGYVAIIGEVFKTDIIETKTGKTILTFYITDYTSSITVKCFLKSQ
EKEEVLDNVKKGLYCKVRGEAVYDTYAREVVIMGRDIARMKKIDRMDGAEEKRIELHLHT
NMSSMDGITSASKIIETAAKWGHEAISITDHGVVQAYPEAQIAAKKNNIKVLYGVEGYLV
NNGIPLVINEKDNTLDDTFVVFDLETTGFSPVNDKIIEFGAVKIRNGEIIDRFSCFVNPE
REIPYKITELTSINSSMVRDAETIDSVLPKFIKFCENSVIVAHNASFDTGFIKKNCRDLN
IEFDFPILDTVTLSRFLYPELKKVKLNIVAKFLGISLENHHRAVDDAKATADILLKSFEK
IKEEFEINDLKSLNDLFLSKVDIKKQPTYHIIILAKTQIGLKNLYKLVSKAHIENFFRRP
RTPKTLLSEFRDGLIIGSACEAGEVYKAVLEGKSDEEIKEIIEFYDYVEIQPIANNQFLI
EKGSVKDEEELRDINKRIYRLGKECNKPTVATGDVHFLNPTDEAFRRIIMAGQGFSDADN
QPPLYLKTTEEMLKEFSYLGREIAKEVVIYNPKKIADSIDVLKPIPDETYPPKIEGAEEE
IKNMTLNKAHSIYGEILPEVVQKRLDKELNSIINNGYAVLYLIAQKLVAKSTEDGYLVGS
RGSVGSSFVATMSDITEVNGLPPHYVCPNCKKSEFFLDGSISSGADLPNKNCPDCGTPYK
RDGHDIPFETFLGFEGDKEPDIDLNFSGEYQGVVHRYTEVLFGKGHTFKAGTIGTVAEKT
AYGYVKKYLDEREIITSSAEIERLTIGCTGIKRTTGQHPGGIMVVPADNEIYNFCPIQHP
ADDNDTDVITTHFDYHSISGRLLKLDILGHDDPTVLRMLQDLTGLDPKTIPLNDEKVLSL
FTSPDALGVTKEELECEVGSYGLPEFGTKFVRAMLLDTQPKTFADLVRISGLSHGTDVWL
NNAQYYIKEGFTTLRDCIATRDDIMVYLMYKGLPPKSAFTIMEKVRKGKGLSEDDEKLMR
EHEVPDWYIGSCKKIKYMFPKGHAVAYVMMAVRIAYYKVYYPEAYYATYFTVRADDFDAN
LVCLGEGAINAKLQELYELGNNATVKDKGLITVLELCFEAYKRGVKFLRVDLYKSEAVKF
KIEDGALRPPLNSLPGVADNAGKNIVEARKKGEFISKEDLRIRAGVSKTVIEGLNNHGCL
EGLSETNQLSLF
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
gtggttcttattagtcaagatcttataaaacaattaacaaaagaaattaataaaaatgaa
aatttagaaaataaagaaataagactattaagatttcagttttataaaaaaagccaaata
ttaaaagttgtactgaaatcattggaatcacttacaagccaggaagaagaatatttaaaa
aaattaattatagacaatctaggatttcatataaatatagagtttttatgttatttagac
gtaagtaatacatcgttagaagagattaattcaaagtattgggttaatgtggcagaagaa
atagcaaaaaaatatccgttatgtcgttctatattgtattcaaaaaatagaaaagttaaa
gaaaaagttataaatatatattctggaaatgaaacattaataaatcatgctttaaataaa
aaaatagataagctacttcaaaataacataaaggatatgtttagtttttcagcaacagtt
aattttagttttgattctagtttattagttacagaggaatatgaagctagtaaaaaggaa
gaaaatcttaaaataataaaagaagttatgaatggtagaacagtaacatcggaaagttct
ggtttaaaggcaaataaaacacaaagatccaataataatggatataggaaaaatgataat
aaatctaattatgcctcatataaaagagagcctaaagatgaaaataccatcttaggaaga
ggtataagaacggagtctacacctataaaagatatagacgaaacaacaggatatgtagca
ataataggtgaagtttttaaaacagatattatagaaactaagactggaaaaactatactt
acattttatattacagattatacaagttctataactgttaagtgctttttaaaatctcaa
gaaaaagaagaagtccttgataatgttaagaaaggcctttattgcaaagtaagaggtgaa
gctgtatatgatacctatgctagagaagtggttattatgggtagagatatagctagaatg
aagaaaattgatagaatggatggtgctgaagaaaaaaggatagaacttcatctacatact
aatatgagtagtatggatggaataacctcagcatctaaaataatagaaactgctgcaaag
tgggggcatgaagcaatctctataacagatcatggagtggttcaagcttatccagaagct
caaattgctgctaaaaaaaataatataaaagtactatatggtgttgaaggttatttagtt
aataatggaattcctcttgtaataaatgaaaaggataatacattagatgatacatttgtt
gtttttgatttagaaacaacaggcttttctccagttaatgataaaataatagaatttggt
gcggttaaaattagaaatggtgaaataatagacagatttagttgttttgttaatcctgaa
agggagattccatataagattacagagctaacaagcatcaatagtagtatggttagagat
gcagaaacaatagatagtgtacttccaaaatttataaaattttgtgagaacagtgtaata
gtagctcataatgcatcttttgatactggttttataaaaaagaattgtagagatttgaac
atagaatttgattttccaatattggatacagttacattgtccaggtttttatatcctgaa
ttaaaaaaggttaaactaaatatagttgctaaattcttaggaatttctcttgaaaatcac
catagggctgtagatgatgctaaagctacagcagatatacttttgaagtcatttgaaaag
ataaaagaagaatttgaaattaatgatttaaaatcattaaatgatttatttttatccaaa
gtagatataaagaagcaaccaacttatcatataataattttggcaaaaacccaaatagga
ttaaagaatctatataaactagtttctaaagctcatatagaaaatttttttagaagacca
agaacaccaaaaactcttctttctgaatttagggatggcttaattataggatcagcctgt
gaagcaggagaagtatataaagctgttttagaaggaaaaagtgatgaggaaataaaagaa
attatagagttttatgattatgttgaaattcaacccatagctaataaccagtttctaatc
gaaaaaggttctgttaaagatgaagaagagcttagagacattaataaaagaatatatagg
ttaggcaaagaatgcaataaacctactgtagctacaggagatgtacattttttaaatcct
actgatgaagcttttagaagaataattatggcaggacaaggattttcagatgctgataat
caaccgccactttatttaaaaacaacagaagaaatgttaaaagaattttcttatttaggt
agagaaatagctaaagaagtggttatttataatcctaaaaaaatagctgatagtattgat
gtgttaaaaccaatacctgatgaaacatatccacctaaaattgaaggggctgaagaagaa
ataaaaaatatgacattaaacaaagcccactcaatatatggtgaaattcttccagaagtt
gttcaaaaaagattggataaagaacttaattctataattaacaatggatacgcagtatta
tatttaattgcacaaaagctagttgcaaaatctacagaagatgggtatctagttgggtca
agaggatctgttggatcttcttttgtagcaacaatgtcagatatcactgaagttaatggg
ctaccaccacattatgtgtgtccaaattgtaaaaaatcagaattctttttagatggttcg
ataagttcaggagcagatttaccaaataaaaattgtcctgattgtggtactccctataaa
agagatggtcatgatataccatttgaaactttcttgggatttgagggggataaagaacca
gatattgaccttaatttctcaggtgaatatcaaggtgtagtacatagatatacagaagta
ctatttggtaaaggtcatacatttaaagcaggaacaataggaacagtagcagagaaaaca
gcttatggatatgtaaagaaatatttagatgaaagagaaattataacatcctcagctgaa
atagagagacttactattgggtgtacaggaataaaaagaactacaggacaacatccagga
ggaataatggttgtgcctgctgataatgaaatttataatttttgtccaatacagcatccg
gctgatgataatgatactgatgttataacaacacattttgattatcattcaataagtggt
agattattaaaattagatatactagggcacgatgatcctactgtacttagaatgttacaa
gatttaacaggacttgaccctaaaacaataccattaaatgatgaaaaagttcttagtttg
tttacttcacctgatgcattaggtgttacaaaagaagaactggagtgtgaggtgggaagt
tatggactccctgagtttggtacaaaatttgttagggcaatgcttttagatactcaacct
aagacttttgcagatttggttagaatatctgggctttctcatggtactgatgtttggctt
aataatgctcaatattatataaaagaaggatttactacattaagagattgtatagcaaca
agagatgatataatggtctatttaatgtataaaggattacctcctaagagcgcttttaca
ataatggaaaaagtaagaaaaggaaaaggtctttcagaggatgatgaaaaacttatgaga
gaacatgaggtgcctgactggtatataggatcatgtaaaaagataaaatatatgttccct
aaaggtcatgctgttgcatatgttatgatggctgttagaatagcatattataaggtatat
tatccagaagcttattatgcaacctattttacagtaagggctgatgactttgatgcaaat
ttagtatgtcttggtgaaggagcaataaatgcaaaacttcaagaactatacgaacttgga
aataatgcaactgtgaaagataaagggcttattactgttttagaattatgctttgaagct
tataaaagaggcgtaaaatttttaagagtagatttatataaatcagaagcagtaaaattt
aaaatagaagatggagcacttagaccaccattaaattccttacctggagttgcggacaat
gcaggaaaaaatatagtagaggcaagaaaaaaaggtgaatttatatcaaaggaagattta
agaataagagcaggggtttcaaaaactgtaattgaaggtttaaataatcatggatgctta
gaaggattatctgaaacaaatcaattatcattattttag
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