Chlorobaculum tepidum: CT1258
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Entry
CT1258 CDS
T00088
Symbol
rfaD
Name
(RefSeq) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cte
Chlorobaculum tepidum
Pathway
cte00540
Lipopolysaccharide biosynthesis
cte01100
Metabolic pathways
cte01250
Biosynthesis of nucleotide sugars
Module
cte_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cte00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
CT1258 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cte01005
]
CT1258 (rfaD)
Enzymes [BR:
cte01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CT1258 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cte01005
]
Core region
CT1258 (rfaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Sacchrp_dh_NADP
Polysacc_synt_2
Ldh_1_N
Motif
Other DBs
NCBI-GeneID:
1006615
NCBI-ProteinID:
NP_662146
CyanoBase:
CT1258
UniProt:
Q8KCZ9
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All DBs
Position
1181941..1182939
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AA seq
332 aa
AA seq
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MIIITGGAGFIGSAMLWELNRNGTDEVLIVDDLGRASEGRWLNLRGLRYTDFIHKDDLPD
LLEHDRLPKIDAVIHMGAISSTTEQDANLLLRNNYEYSKMLASWCAKKGVRFIYASSAAT
FGDGSEGYSDGIEVLDRLRPLNMYGYSKHLFDCWALRNGILEKAAGLKFFNVYGPNEYHK
EDMTSVVFKAFHQIGDNGKVRLFRSHNPQYADGEQLRDFVYVKDCTKIMQWLLETPSATG
LFNIGTGQARSFRDLVIATFTAMDRPVSIEFIDMPETIRDKYQYYTCADSAHLRQAGYTG
QMTPLEEGVRDYVQNYLSKPSPHLDTLAFERQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgattatcatcaccggcggcgcggggttcatcggcagcgccatgctctgggaactcaac
cgcaacggcaccgatgaggtactcatcgtcgatgacctcggaagagcgtccgaggggaga
tggctcaacctccggggcctacgctacaccgatttcattcacaaggacgacctgcccgac
ctgctcgaacacgaccgcctgcccaaaatcgacgccgtgattcacatgggagccatcagc
tccaccaccgaacaggacgccaaccttctgctgcgcaacaactacgaatactcgaagatg
ctcgcctcgtggtgcgcaaaaaagggcgtgcgttttatctatgcgtcaagcgcggcaacc
ttcggcgacggctccgaaggatacagtgacggcatcgaggtgctcgaccggctaagacca
ctgaacatgtacggctactcgaagcatctgttcgactgctgggcgctgcgcaacggcatc
cttgaaaaagcggcggggctcaagttcttcaacgtctacgggcccaacgaataccacaag
gaggacatgaccagcgtcgtcttcaaggcgttccaccagatcggcgacaatggcaaggta
aggcttttcagatcgcacaatccacagtacgccgatggcgagcagctgcgcgacttcgtc
tatgtgaaggattgcacgaaaatcatgcaatggctgctcgaaacgccctcggcgacggga
ctgttcaacatcggcaccgggcaggcgcgcagcttcagggatttggtcatagcaaccttc
acggcgatggatcgccccgtcagcatcgagtttatcgatatgcccgaaacgattcgggac
aaataccagtattatacctgtgcggactctgcccatctcaggcaggctggctacaccggc
cagatgacgccgctcgaagagggagtgcgagattatgtgcagaactatctgagcaaaccc
tcgccgcatcttgatacattggcttttgaacggcaataa
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