Yamadazyma tenuis: CANTEDRAFT_108398
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Entry
CANTEDRAFT_108398 CDS
T03099
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CANTEDRAFT_108398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cten03021
]
CANTEDRAFT_108398
Enzymes [BR:
cten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CANTEDRAFT_108398
Transcription machinery [BR:
cten03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CANTEDRAFT_108398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
18246026
NCBI-ProteinID:
XP_006688035
JGI:
Cante1_108398
UniProt:
G3B9E4
LinkDB
All DBs
Position
Unknown
AA seq
1453 aa
AA seq
DB search
MKEVVVDITPKRIQGIEFGALSAKEIIAQSEVEVKTRDLYDLEKGRTVKEFGALDTKMGI
SANSSECSTCHGNLASCHGHFGHIRLALPVFHVGYFKAIIQILQCICKNCGHILLDEQTK
RKYLADLRRPYIDNLRRMKILKSVVDQCKKQRRCFKCTHVNGVVKKAASGAGPAALKIVH
DTFRWVGKKPTPEKEVWDSEIEQVLTRNPELEKFTKRMYEDLNPLKVLHLFKQITPDECE
LFGLDPSRGGRPETYIWRYLPAPPVCIRPSVMMDAQSNEDDLTVKLTEIVWTSSLIKAGI
DKGISINNLMEQWDYLQLSVAMYINSDAANPALMPSAGSGSKSTKPIRGFCQRLKGKQGR
FRGNLSGKRVDFSGRTVISPDPNLKIDEVAVPDRVAKILTYPEKCTRYNRIKLQKLILSG
PDVHPGANYVLKQNENTKRNLRFGDRVKIAKNLHIGDVVERHIEDGDVVLFNRQPSLHRL
SILSHYAKIRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNNLLT
PKSGEPIIAATQDFITGSYLITHKDSFFERASVNQLLCMMSDANLQFDLPPPAIIKPVSL
WTGKQVFSLLIKPNKASNVVINLDAKAKTYIPPERHFANEMSPNDGYVIIRGSQILSGVM
DKSTLGDGKKHSVFYTILRDYGPTEAAEAMNRMSKLCARYLGNRGFSIGINDVTPGSDLK
NKKELMVEQAYLKCDELIDLYNRGKLETQPGCNEEQTLEAKIGGLLSKVREEVGEVCIKE
LDSLNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGNRVPDGFQDRSLPHFTKNSKTPQS
KGFVRNSFFSGLTPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSSQYDNTV
RNSSNGIVQFTYGGDGLDPFDMEGDARPVNFVRQWDHSFNITFSNREMGLLPYQVMEEVE
KVLQPLEDRLIRYDNLGHQIISNREEYIDQNDAEREFYHSIRSFVDKKATHLAKTRQSKH
LKPNYTPPTDGEVFVEDNQDSLNAVDQILKISAKSVDTFLKQCLYKYSRAKVEPGTAVGA
IGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINASKAISTPIINSVLVNDDDE
IAARVVKGRIEKTLLKDVAFHIQDVYKNNMAYLSVKIDLKTIEKLQLELNIDSIAQAIVN
APKLKIQPAHVSITGSDRINILVTLNDSKVESLAKSMNVDYKLSDASNVLFFRMQHLKRM
LPEICIKGLPNISRAVINIRDDSKKELLVEGYGLKEVMSTDGVVGTKTTTNHVLEVFEVL
GIEAARSSIIGEIDYTMSKHGMSVDPRHIQLLGDVMTYKGEVLGITRFGLSKMRDSVLQL
ASFEKTTDHLFDAAFYMKNDKVEGVSECIILGQTMSIGTGAFKLVKTSNVEPQALHQKPT
LFEDLCQTAIAAA
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagtggtagtggatatcacgcccaagaggatccagggtatcgagttcggagcg
ctctcggcaaaggagatcattgcgcagtccgaggttgaggtcaaaaccagagacctctat
gacttggaaaagggcagaaccgtcaaggaatttggtgccctagacaccaaaatgggaatc
agtgccaattctagtgagtgctctacttgccacggtaacctcgccctgtgccacggacat
ttcggccacattcgcctcgcgttgccggtgtttcacgtgggttattttaaggccatcatc
cagatcctccagtgcatctgtaagaattgtgggcacattttactcgacgaacagaccaaa
agaaagtacttggccgacttgcggcgcccatacattgacaatttgcggcgaatgaagatc
ttgaaaagcgtggtggatcagtgtaagaaacagagacgatgctttaaatgtacccacgtc
aacggagtcgtgaaaaaggctgctagcggtgctgggcccgccgccttgaagatcgtccac
gatactttccggtgggtgggcaagaaacccacccccgagaaggaggtgtgggacctggag
attgagcaagtgttgaccagaaaccccgagcttgaaaaattcacaaagagaatgtacgaa
gatttgaacccgttaaaggtgttacatctcttcaagcagatcacccccgacgaatgcgag
ttgtttggtcttgatccgtccagaggtggtcgacctgaaacgtatatctggagatactta
ccagcacctccagtgtgtatcagaccgtcggtgatgatggatgcacagtccaacgaagac
gacttgacggttaagttgacggaaatagtatggacgtcatcgttgatcaaggcaggtatc
gataagggtatctccatcaataacttgatggagcagtgggactacttgcaattgctggtt
gcaatgtatatcaactcagatgcagcgaacccagcgttgatgccgtctgctgggtcgggg
tccaagtcgaccaagcccatacgaggcttctgccagcggttaaaggggaaacaggggaga
tttagaggaaatctttcggggaaaagagtggatttttcaggtagaaccgtcatttcacct
gatcccaacttgaaaatcgacgaggtggctgtacctgatcgggtggctaagatcttgacg
tacccagagaagtgcacccggtataatcggattaagttgcaaaagttgattctcagtggt
ccagatgtgcacccgggtgcaaactatgtgttgaagcagaatgaaaacacaaagagaaac
ttgcggtttggtgaccgagttaaaatcgccaaaaatttgcatatcggagatgtggtcgag
agacacattgaagacggagatgtggtgttgttcaatcgacaaccctctttacataggcta
tcgattttgtcgcactacgccaaaatcagaccttggagaaccttccggttgaacgaatgt
gtatgtactccctacaacgccgatttcgatggagacgaaatgaacttgcatgtacctcag
actgaagaagcccgggcggaggccatcaacttgatgggcgtgaaaaacaatttattgacg
ccaaaatccggtgagcctattattgcagccactcaggatttcattaccggctcgtacttg
ataactcataaggactcattttttgaaagagcttcggtcaaccagcttttgtgtatgatg
tcggatgccaatctccagtttgatttgcctcctcctgccatcatcaaaccggttctgttg
tggacgggaaaacaagttttttcgttgctcatcaaaccaaataaagcctccaacgtggtg
atcaatttggatgcaaaagcaaaaacatatatccctccagaaaggcatttcgccaacgaa
atgtctccgaacgacgggtatgtgatcatcagaggctctcagatcttgtctggtgtcatg
gacaaatccactcttggagacgggaagaaacactcggttttttacactattctcagagac
tacggccctactgaagctgcagaagcgatgaacagaatgtccaagttgtgtgcaaggtac
ttgggaaacagaggattttccattggtatcaacgacgtgactcctgggtccgacttgaaa
aataagaaggaattgatggtggagcaggcgtacttgaagtgtgacgagttgattgatttg
tacaacagaggcaagttggaaacccagccgggttgtaatgaagaacagacgttggaagcc
aagatcggagggttgttatccaaggtgagagaagaagtaggggaagtgtgtatcaaggag
ttggactctcttaatgctcctttgatcatggccacctgtgggtccaagggatccacctta
aatgtctcccaaatggtggctgttgtaggacaacagattatttctggtaatcgtgttcct
gacgggttccaagacagatcgttaccacatttcaccaaaaactccaagactccccagtcc
aaagggtttgtgagaaactcgtttttcagtggattaactcctcctgagttcttgttccat
gccatttccggtagagaagggttggttgacacggctgtcaagaccgctgaaaccgggtac
atgtcgagaagattaatgaagtcgttggaagatttgtcttcacagtacgacaacacggtt
cggaactcctccaacggaattgtacagttcacctatggtggtgacgggttggatcctttc
gacatggaaggagacgccagacccgtcaactttgtacgtcaatgggatcacagtttcaac
atcaccttcagcaaccgtgaaatgggtttactcccttatcaggttatggaggaggtggaa
aaggttttgcagccattggaagaccgtttgatcagatacgataacttgggccaccaaatc
atcctgaaccgtgaagagtatatcgaccagaatgatgccgagagagagttctaccattcg
atcagaagctttgtcgacaaaaaggccacccatttggccaaaaccagacaactgaagcac
ttgaaacccaattacacgcctcccaccgatggagaagtgtttgtggaggataaccaagac
agcttgaatgcggtggaccagatcttgaagatctctgccaaatccgttgacactttctta
aagcagtgcttgtacaaatactccagagcaaaagtcgaacctggaaccgctgtgggtgcc
attggtgcccagtccattggtgaacctggtacgcagatgactttgaagacgtttcatttt
gctggggtggctagtatgaatgtgacgttgggagttcctcgtatcaaggaaatcatcaac
gcttccaaggcgatttccacccccatcatcaactcggttctcgtcaatgatgacgatgaa
atcgccgcccgtgttgtcaagggaagaatcgaaaagactttgttgaaagacgtggcgttc
catatccaagacgtctacaaaaacaatatggcgtacttgtcggtgaagatcgacttgaaa
accatcgagaagttgcaattggaattgaacattgactccattgcccaggccattgtcaat
gctcccaagctcaagattcagccggcgcatgtgtctatcactggtagtgaccgaatcaat
attcttgtcactttgaatgatagtaaggtggaaagtttggccaagtccatgaatgtggac
tataagctcagcgacgcttccaacgtgctcttcttccgcatgcaacacttgaagagaatg
ttgccagaaatctgtatcaagggtttgcccaacatttcccgtgccgtcatcaatatcaga
gacgacagtaagaaagagttgttggttgaaggatacggtttgaaagaagtcatgtccacc
gatggggttgttggcaccaagaccaccaccaaccatgttcttgaagtgtttgaggtgttg
ggtattgaagcggccagatcctctatcataggtgaaattgactacaccatgagtaaacac
ggcatgagtgtggaccctcgtcacatccaacttttgggagatgtaatgacttataaggga
gaagtattgggaatcacccggttcgggttgagtaagatgagagactcggtgttacagttg
gcatctttcgaaaagaccactgaccatttgttcgacgctgctttctacatgaaaaatgac
aaggttgaaggtgtgagtgagtgtattattttggggcaaaccatgagcattggaaccggg
gcatttaagttggttaaaacctccaatgtcgaaccccaggccttacaccagaaacccact
ctttttgaagatctctgccaaacggccattgcagctgcctaa
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integrated database retrieval system
