Yamadazyma tenuis: CANTEDRAFT_108778
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Entry
CANTEDRAFT_108778 CDS
T03099
Name
(RefSeq) beta and beta-prime subunits of DNA dependent RNA-polymerase
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cten
Yamadazyma tenuis
Pathway
cten03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cten00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CANTEDRAFT_108778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cten03021
]
CANTEDRAFT_108778
Enzymes [BR:
cten01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CANTEDRAFT_108778
Transcription machinery [BR:
cten03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CANTEDRAFT_108778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
18246061
NCBI-ProteinID:
XP_006687927
JGI:
Cante1_108778
UniProt:
G3B8K7
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MGNKRKASHIASDGVSTDEAFQPLLKEVYKGKKLTDKINTAEDKWNLLPAFLKVKGLVKQ
HLDSFNYFVDTDLKKIIKANELVLSDVDPEFYLKYLDIRVGCKSSTSTAKGLSKEVNLVP
HDCRLRDLTYSAPIYVDVEYTRGRKIIVHRDLEIGRMPIMLRSNKCLLDGIDDKKMAKYD
ECPLDPGGYFIVNGTEKVILVQEQLSKNRIIVEADEKKGIVQASVTSSTHERKSKTYVIT
KNDKIYLKHNSISEDVPIVIILKAAGITSDLEILQLVCGNDPNYQDLFAINFEEAAKLEI
FTQQQALHYVGKRVKTIRRAGAPKLSQLQEGIEAIATTIIAHITVSDLQFREKALYIAMM
TRRVLMTMENPKMVDDRDYVGNKRLELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSR
ASEFDALLSINIHSNNITMGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTR
ISSQFEKSRKVSGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTDDEEEPIKRL
CFILGCEDILEVDSASLHAKGNYGIYLNGTLIGTTRFPAKFVGDFRNLRRTGKISAFISI
YTNSHQSAVHIATDGGRICRPLIIVDKNNVSKVKAKHLLKLQRDEWAFDDFLKHGLVEYL
DVNEENDSLIAIYERDLSDSTKSNITHLEVEPFTVLGAVAGLIPYPHHNQSPRNTYQCAM
GKQAIGAIGYNQFRRIDTLLYLMVYPQQPMVKTKTIELIDYDKLPAGQNATVAVMSYSGY
DIEDALVLNKASVDRGFGRCQVLRKNTITLKRYPNHTKDILSGMRVDENNEPIPPHSSLG
PDGLGEVGMKLENGQVYVNKCVPTNAGETVLNGPGANEQPAESHRETPAYYKGPEPSYVD
QVMMSVSDNDQALIKVLLRQTRRPELGDKFSSRHGQKGVCGIIVQQEDLPFNDDGISPDI
IMNPHGFPSRMTVGKMIELISGKAGVLNGTLEYGTCFGGSDLQDMSEILVQNGFNYSGKD
MLYSGITGECLQAYIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRL
GEMERDCVIAYGASQLLLERLMLSSDAFEVDVCNKCGLMGHNNWCTSCNSSEHVIKMTIP
YAAKLLFQELISMNIAPRLRLGDVF
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataagaggaaagcttctcatatagctagtgatggcgtgagtacggacgaggcc
ttccagccattgttgaaagaagtgtacaagggtaaaaaactcaccgataaaatcaatact
gccgaagataaatggaatcttttgccagcgttcttgaaagtcaaaggtttggtcaaacag
catctcgattctttcaattattttgtcgataccgacttgaagaagattatcaaggccaat
gaattggtgttgtcagatgtggatcccgagttttacttgaagtatcttgacatcagagtc
gggtgcaagtcttctacttctaccgctaagggcctttccaaggaagtcaacctcgtgcct
catgattgtagattgagagatttgacctactcggcccccatatacgtcgatgtagagtac
acaagaggaagaaagattattgttcacagagacttggaaattggaagaatgcccatcatg
ttacggtctaacaagtgtttgttagatggcattgacgataagaaaatggctaaatacgac
gagtgcccccttgatcccggtggatactttatcgttaatggtacagagaaggtgatattg
gtgcaagaacagttgtccaagaatagaatcatcgtggaagctgacgagaaaaagggtata
gttcaggcctcagtcacatcttccactcacgaacgtaagtccaaaacctatgtcatcacc
aaaaacgataagatctacttgaagcataactccattagtgaagatgttcccatagtaatc
atcttaaaggctgcgggtattacctctgacttagaaatcttacaattggtctgtgggaat
gatcctaactaccaggatttgtttgcaatcaactttgaagaagctgccaagttggaaatc
ttcactcagcaacaagcacttcactatgtgggaaaaagagtgaagaccatcagacgagct
ggtgcccccaaattgtctcagcttcaagaaggtatagaggccattgcaactaccattatt
gctcacatcaccgtctcagaccttcaattcagagaaaaggccctttacattgccatgatg
actagaagagtgttaatgacgatggaaaaccctaaaatggtcgatgatcgtgattatgtg
ggtaacaaaagattagagttagctggccagttgatgtcgttgttgtttgaagatttattc
aagaagttcaactcagacttcaaggcaaatattgataagattttaaagaagcccagcaga
gcttctgagtttgatgcgttattgtccatcaacatccactctaataatattaccatgggt
atgaacagagccatttccaccgggaactggtcattaaagcggtttaaaatggaaagggca
ggtgtcactcatgtattatccagattgtcatatatttcagcattgggaatgatgaccaga
atctcctcccagtttgaaaaatctcgtaaagtctcgggaccaagagcattgcaaccttca
cagttcgggatgttgtgtacttctgatactcctgagggtgaagcctgtgggttggtgaag
aacttggctttaatgacgcacatcaccactgatgatgaagaagaacccattaagaggtta
tgttttattttgggatgtgaggatattcttgaagtcgactctgcaagcttacacgccaaa
ggcaactatgggatatatctcaacggtactttgataggtaccactcggttccctgccaag
tttgttggtgacttccgtaacttgagaagaactggcaaaatatctgcatttatttccatc
tacacaaacagtcatcaaagtgctgtgcatattgctactgacgggggaagaatctgtcgt
ccgttgattattgtcgacaaaaacaatgtgtccaaggtcaaagctaaacacttgttgaaa
ttgcaaagagatgagtgggccttcgatgatttcttgaaacatggtttggtagagtaccta
gacgtcaacgaagaaaacgactctttgattgccatctacgaaagagatttatcggattct
accaaactgaacattactcatttggaggttgaaccttttactgtgttgggagcagttgca
ggtttaattccatatcctcaccataaccaatctccaagaaatacctatcaatgtgctatg
ggtaaacaagctattggagctattggatacaaccagttcagacgaatcgacactttgttg
tatttaatggtatatcctcaacaaccaatggtgaagactaaaacaatcgaattaattgat
tacgataagcttccagccggtcagaacgcaactgttgcagtgatgtcgtattcgggttat
gatatcgaagatgccttggtattgaacaaggcttctgttgatagaggattcggaagatgt
caagttttaagaaagaacaccatcacgttgaaaagataccctaaccacacgaaggatatt
ttaagtggtatgagagtcgacgagaataacgagcccatccctccacactcatcactagga
ccagatggtttgggggaagtgggtatgaaactcgagaatggacaagtttatgtgaataaa
tgtgttcccacaaatgctggagaaactgttttgaacggaccaggtgccaatgaacaacct
gctgaaagtcaccgagaaacacctgcctattacaaaggacccgaaccttcttatgtggat
caagtgatgatgtctgttagtgacaacgaccaggccttgataaaggtgcttttgagacaa
acaagaagacccgaattgggtgacaagttttcttcaagacacggccaaaaaggtgtatgt
ggtatcattgtgcaacaagaagacttaccgttcaacgacgatggtatttctcctgatatc
atcatgaacccacatgggttcccttcgagaatgacggtggggaaaatgatcgagttgatc
agtgggaaagctggtgtgttgaatggaacattggagtatggaacctgttttggtggatct
gatttgcaggatatgtctgaaatattggtgcaaaatgggttcaattacagcgggaaagat
atgctctactcaggtataacaggagaatgtctccaggcttatattttctttggacccata
tactaccagaagttgaagcatatggttctagacaagatgcatgccagagccagaggtcca
agagctgttttaactagacaacctaccgaaggtagatcgagagacggtggattgagatta
ggagaaatggaaagagattgtgtgattgcttacggtgcatctcaattgttattggagaga
ttgatgttatcatccgatgcgtttgaggtggatgtctgtaataagtgcgggttaatgggc
cacaacaactggtgtacatcgtgtaacagttctgagcacgtgatcaagatgaccattccc
tatgccgccaagttattgttccaggagttgatatcaatgaacattgcacctaggttgaga
ttgggagacgttttctag
DBGET
integrated database retrieval system
