KEGG   Yamadazyma tenuis: CANTEDRAFT_114816
Entry
CANTEDRAFT_114816 CDS       T03099                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cten  Yamadazyma tenuis
Pathway
cten03020  RNA polymerase
cten03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cten00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CANTEDRAFT_114816
  09124 Replication and repair
   03420 Nucleotide excision repair
    CANTEDRAFT_114816
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cten03021]
    CANTEDRAFT_114816
   03400 DNA repair and recombination proteins [BR:cten03400]
    CANTEDRAFT_114816
Transcription machinery [BR:cten03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CANTEDRAFT_114816
  RNA polymerase III system
   RNA polymerase III
     CANTEDRAFT_114816
  RNA polymerase I system
   RNA polymerase I
     CANTEDRAFT_114816
DNA repair and recombination proteins [BR:cten03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CANTEDRAFT_114816
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N Sof1 SH3_2
Other DBs
NCBI-GeneID: 18247595
NCBI-ProteinID: XP_006688659
JGI: Cante1_114816
UniProt: G3B9Y0
LinkDB
Position
Unknown
AA seq 214 aa
MDEADRSMSRLWRTFKTVKEMVRDRGYYISQEELDMSLDEFRQKICDSMNMPQRKLMCFQ
ANPTAESLEKFPELGTLWVEFCDEDSVGIKTMRNFCIHISERNFSTGIFIYQSSITPSAN
KLIPTVAPASIETFQESDLVVNITHHELVPKHIKLSKGEKKELLDRYRLKESQLPRIQRE
DPVARYLGLKRGEVVKIIRRSETSGRYASYRICL
NT seq 645 nt   +upstreamnt  +downstreamnt
atggatgaagcagacagaagcatgtcccgtttgtggagaacgttcaagaccgtgaaggag
atggtcagagataggggctattacatctctcaagaggagctcgatatgagcttggatgaa
ttcagacaaaaaatatgtgacagtatgaacatgccacaaagaaaattgatgtgttttcaa
gccaacccaacggcagaatccttggaaaaattccctgagcttgggaccttatgggttgag
ttctgtgacgaagattcagtaggaattaaaacaatgagaaacttctgtattcatatcagt
gaaaggaacttttccactggtattttcatttaccagtcctccataaccccaagtgcaaat
aaattaattccaacagttgcaccagccctgattgaaaccttccaggaaagtgacttggta
gttaacatcacccaccatgagttggttccaaaacacatcaagttgtcgaaaggagaaaag
aaggaattgttggatagatacagattaaaggaatcgcagttaccaagaatccaaagagaa
gacccagtggccagatatttgggtttgaaaaggggtgaagttgttaagattatcagaaga
tctgaaacctcaggtcggtatgcttcttacagaatttgcttataa

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