KEGG   Yamadazyma tenuis: CANTEDRAFT_115112
Entry
CANTEDRAFT_115112 CDS       T03099                                 
Name
(RefSeq) hypothetical protein
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
cten  Yamadazyma tenuis
Pathway
cten03020  RNA polymerase
cten03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cten00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CANTEDRAFT_115112
  09124 Replication and repair
   03420 Nucleotide excision repair
    CANTEDRAFT_115112
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cten03021]
    CANTEDRAFT_115112
   03400 DNA repair and recombination proteins [BR:cten03400]
    CANTEDRAFT_115112
Transcription machinery [BR:cten03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     CANTEDRAFT_115112
  RNA polymerase III system
   RNA polymerase III
     CANTEDRAFT_115112
  RNA polymerase I system
   RNA polymerase I
     CANTEDRAFT_115112
DNA repair and recombination proteins [BR:cten03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      CANTEDRAFT_115112
SSDB
Motif
Pfam: DNA_RNApol_7kD HypA zinc-ribbon_6 C1_1 FYDLN_acid DZR DUF5816 DUF1451 zf_UBZ YjdM_Zn_Ribbon FYVE_2 TackOD1 zf-C3HC zinc_ribbon_15 Zn-ribbon_8 zinc_ribbon_5 zf-ribbon_3 zinc_ribbon_13 Zn_Tnp_IS1595
Other DBs
NCBI-GeneID: 18247723
NCBI-ProteinID: XP_006688769
JGI: Cante1_115112
UniProt: G3B7M9
LinkDB
Position
Unknown
AA seq 73 aa
MSSPQREGFTAPSSISHAAQGYVASKSLGVKYYCAQCGSSFSLNKSDAIRCKDCGHRVIY
KARTRKMVQFEAR
NT seq 222 nt   +upstreamnt  +downstreamnt
atgtcatcaccacagagagaaggcttcaccgccccctcgtccatatcacacgctgcccaa
gggtatgttgcctccaagtccttgggggttaagtactactgtgcccagtgtgggtcctca
ttttccttgaacaagagtgatgccatcagatgtaaagactgtgggcacagagttatttat
aaggccagaaccagaaaaatggtacaatttgaggcgagatga

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