Comamonas terrigena: CT3_27900
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Entry
CT3_27900 CDS
T09012
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ctez
Comamonas terrigena
Brite
KEGG Orthology (KO) [BR:
ctez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ctez03009
]
CT3_27900 (rimO)
Enzymes [BR:
ctez01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CT3_27900 (rimO)
Ribosome biogenesis [BR:
ctez03009
]
Prokaryotic type
ribosomal protein modification factors
CT3_27900 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
BBL25335
LinkDB
All DBs
Position
complement(3128810..3130207)
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AA seq
465 aa
AA seq
DB search
MTETISQQDRLPRIGMVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIVNTCGFI
DDAVKESLDTIGEALAANGKVIVTGCLGAKAGKEGGATMVAEIHPSVLAVTGPHATQEVM
DAVHTHLPKPHDPFVDLVPGSFGDAGIKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLV
SRPIGDVLKEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELTEELG
KLAAQHGAWVRLHYVYPYPTVDNILPLMAEGKILPYLDVPLQHSHPDVLKRMKRPASGEK
NLDRIREWRAICPELVIRSTFIAGFPGETEEEFEHLLDFIREAEIDRAGCFAYSPVEGAT
ANELPGMLPESVREARRARFMEVAEEVSAKRLQRRVGQVMKVVVDKAVSLGKKGGVGRTY
ADAPEIDGVVHIQPPEKASKTYKVGDMISVRILGAQGHDLVGIPV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaccatctcccaacaggaccgcctgccgcgtataggtatggtatcactcggg
tgccccaaggccctgaccgactccgagctgatccttacccagctcagcgccgagggctac
cagacctccaagaccttcgaaggcgcggatctggtcatcgtcaacacctgcggcttcatc
gacgatgccgtcaaggaaagcctggacaccatcggtgaagccctggccgccaacggcaag
gtgatcgtcaccggttgcctgggcgccaaggccggcaaagagggcggcgccaccatggtg
gccgaaatccaccccagcgtgctggccgtgaccggcccccacgccacgcaggaggtgatg
gatgcggtgcacacccacctgcccaagccccacgatccctttgtcgatctggtgcccggc
agctttggcgatgcaggcatcaagctcacgcccaagcactacgcctacctgaagatttcc
gaaggctgcaaccaccgctgcaccttctgcatcatccccagcatgcgcggggacctggtg
tcgcgtccgattggtgacgtgctcaaggaagccaaggcgctgttcgaaggcggcgtcaag
gaactgctggtcatcagccaggacacctcggcctatggcgtggacgtgaagtaccgcacc
ggcttctgggacggcaagccggtcaagacccgcatgctggagctgaccgaagagctgggc
aagctggccgcacagcacggcgcctgggtgcgcctgcactatgtctacccctatcccacg
gtggacaacatcctgccgctgatggctgaaggcaagatcctgccttacctggatgtgccg
ctgcagcacagccaccccgatgtgctcaagcgcatgaagcgccccgcatcgggcgagaag
aacctggaccgcatccgcgaatggcgcgccatctgccccgagctggtcatccgcagcacc
ttcatcgccggtttccccggcgagaccgaagaagagttcgagcacctgctggacttcatc
cgtgaagccgaaatcgaccgcgccggctgctttgcctacagcccggtcgaaggcgccacc
gccaacgaactgcccggcatgctgcccgagtccgtgcgcgaagcacgccgcgcccgcttc
atggaagtggccgaggaagtgtccgccaagcgcctgcagcgccgcgtgggccaggtcatg
aaggtggttgtggacaaggctgtgagcctgggcaagaagggcggcgtgggccgcacctat
gccgatgcgcccgaaatcgacggcgtggtccacatccagccgcccgaaaaggccagcaag
acctacaaggtgggcgacatgatcagcgtgcgcatcctgggcgcgcaaggccacgatctg
gtcggtattccggtctga
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