Caldimicrobium thiodismutans: THC_0583
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Entry
THC_0583 CDS
T04224
Name
(GenBank) hypothetical protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cthi
Caldimicrobium thiodismutans
Pathway
cthi00900
Terpenoid backbone biosynthesis
cthi01100
Metabolic pathways
cthi01110
Biosynthesis of secondary metabolites
Module
cthi_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
THC_0583
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cthi01006
]
THC_0583
Enzymes [BR:
cthi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
THC_0583
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
THC_0583
2.5.1.29 geranylgeranyl diphosphate synthase
THC_0583
Prenyltransferases [BR:
cthi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
THC_0583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
GUN4_N
Motif
Other DBs
NCBI-ProteinID:
BAU22977
UniProt:
A0A0U5AQ53
LinkDB
All DBs
Position
complement(580831..581733)
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AA seq
300 aa
AA seq
DB search
MDNFDKLKTYLEEKRFLIEKTLEELFPKERSYGERVISASYYSLSAGGKRLRPILCLMGY
ELGDKKSEEILPFACGIECIHTYSLIHDDLPCMDNDDLRRGKPSCHKAFDEATAILAGDG
LQALAYEWFTHPEVVKKINPKVLLKAINYIAKASGLQGMVGGQMADLLSEGKKGNLKLLR
WIHEHKTVALIEASLVSGAILAGIPAKTLKILSRFGKKFGLLFQITDDLLDLIGDEKQMG
KPAKSDLKKGKLTYPSLFGLEKTKRLAEKTTQEAIDSLAPLGEKGELLEILTHYLLQRIS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggataattttgacaaacttaagacctatttagaggagaagcgtttcctcattgaaaaa
actttagaggaattatttcctaaggagagatcctatggagaaagagtaatctctgcctcc
tattatagtctctctgccggagggaaaagactgcgtcccattctttgtcttatgggatat
gaacttggggacaaaaaatctgaggagatcttgccctttgcctgtggtatagaatgtatt
cacacctattcccttattcatgatgacctgccctgtatggataatgatgaccttaggaga
gggaaaccatcctgtcataaggcttttgatgaagcaaccgctatcttagctggtgacggc
cttcaggccttagcctatgagtggtttactcatccagaggtagtaaaaaagattaatccc
aaggtccttttgaaggcgattaattatattgctaaggcctcaggacttcagggcatggtt
ggtggacagatggcagaccttctctccgaaggcaaaaaaggtaatttaaaattgttgaga
tggattcatgaacataaaacggtagccctgattgaggcctctcttgtcagcggggctatc
cttgctgggatccctgcaaagacccttaaaattctatccagatttggaaaaaaatttggc
cttctctttcagataactgatgaccttctggatcttattggcgatgaaaagcagatggga
aaacccgctaaatctgaccttaaaaaagggaaactcacctacccttctctctttggtctt
gagaaaacaaaaaggcttgctgaaaaaactactcaagaggctatagatagtttagctccc
ctgggggaaaagggggaactcttagagatcttaactcattatctcttacagaggataagt
taa
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