Caldimicrobium thiodismutans: THC_0928
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Entry
THC_0928 CDS
T04224
Name
(GenBank) hypothetical protein
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cthi
Caldimicrobium thiodismutans
Brite
KEGG Orthology (KO) [BR:
cthi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cthi03009
]
THC_0928
Enzymes [BR:
cthi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
THC_0928
Ribosome biogenesis [BR:
cthi03009
]
Prokaryotic type
ribosomal protein modification factors
THC_0928
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Ortholog
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Fer4_12
TRAM
Motif
Other DBs
NCBI-ProteinID:
BAU23313
UniProt:
A0A0U5AQY8
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Position
complement(931691..932995)
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AA seq
434 aa
AA seq
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MKRMKLVRSKTSKKVYPVSLGCPKNKSDFEKLLFLLNQKGYEFTLDPGEADLFWVNTCAF
IQPAVNEALEHIFELGELKTPHQKLIVSGCLPARYAIEDLKKLLPEVDEFYGIEPFRYFA
KEEPSDKVLSESPFYSYLKISEGCSHRCSYCTIPKIRGPFRSKPLELVLKEAENLLKKGV
RELIIVGQDITLYGRDLKESNLLIKLLKKISSLPFHFRIRLLYLHLLHLSDELIEAIFEI
PKVVPYFEIPIQHADSEILKKMHRGYTPERILKIIEKVRSFNSMATLRTSIIVGFPGEKE
KHFLNLITFLKEAQFDYLGVFPFYPEEGTPAEALPEQVPSKEKKRRVKEVLKVQKEITKK
RLNLRVGQRDEVLILGEDIKGRLFGLSTLQAPEIDGLTFLKRGINNLLPGNLVKVKILKS
GAYDLWAEPLDLRG
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgaagttagtcagatcaaaaacctctaaaaaggtttatcctgtaagtctt
ggttgcccgaaaaataagagtgattttgaaaaactgctttttcttttaaaccagaagggt
tatgagtttacccttgatcccggggaggcagatcttttctgggtgaatacctgtgccttt
atccagccagctgtaaatgaagcccttgaacatatctttgaattgggagagcttaaaacc
ccccaccaaaaactcattgtttcaggatgccttcctgccagatatgctattgaggacctg
aaaaaacttttacctgaggttgatgaattctatggtatcgagccctttcgctattttgct
aaagaagagccttctgataaagtgctttcagaaagccccttttatagctacttaaagatc
tcagagggatgtagtcatcgttgtagttattgcactattcccaaaataagaggccccttt
agaagtaaacccttggagttggttctcaaagaggcagaaaatctcctgaaaaaaggggta
agggagcttatcattgtgggtcaggatataaccttatatggtagggatcttaaggaatct
aatcttcttatcaagctccttaaaaaaatctcttctcttccttttcattttcgaataaga
cttctctatcttcatcttcttcatctgagtgatgagcttattgaggctatttttgaaatc
ccaaaggttgtgccctattttgagattcctattcagcatgctgattccgagattttgaaa
aagatgcatcgggggtatacccctgaaagaatcttgaaaataatagaaaaggtgcgctct
ttcaattctatggcaacccttcggacaagcattatagttggcttcccgggagagaaagaa
aagcacttcctcaatcttatcacctttcttaaagaggcccaatttgattacttaggggtt
tttcccttttatcctgaagaagggacacctgctgaggctcttcctgaacaggttccttca
aaagagaaaaaaagacgggtaaaagaggtcttaaaggttcagaaagaaataacaaaaaag
cgtttaaacttaagggttggtcaaagagatgaggttttaattcttggagaggatattaaa
ggtcggctttttggcctttctacactacaggccccagaaattgacggccttacctttctt
aaaaggggcatcaataatcttttacctggaaatttggtaaaggtaaaaattctaaaaagt
ggggcctatgacctctgggctgaacccttggatttaaggggatga
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