Thermochaetoides thermophila: CTHT_0035610
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Entry
CTHT_0035610 CDS
T03100
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cthr
Thermochaetoides thermophila
Pathway
cthr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cthr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CTHT_0035610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cthr03019
]
CTHT_0035610
Enzymes [BR:
cthr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
CTHT_0035610
Messenger RNA biogenesis [BR:
cthr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CTHT_0035610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
AAA_16
Clp1
ATP_bind_1
Dynamin_N
SRP54
CbiA
RecA
AAA_28
AAA_33
ATP-synt_ab
ABC_tran
AAA_22
nSTAND3
T2SSE
Septin
AAA_24
Motif
Other DBs
NCBI-GeneID:
18257599
NCBI-ProteinID:
XP_006693991
UniProt:
G0S6Z7
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MSIPGLGQYTTQPTASTSRTITLRPFWEWRFDLPHNNSSVSVRLVNGTAERDGTELALNH
TYTFSRTKSKILTYSGCTLEISGQCNDHVAQYATPEESPALAHLNLHFALQTQRTAATSQ
LKNGGNAINNDTSLGRGPRVMVCGPASSGKTTLVRTLAALATRTGAQPLVANVDPREGLL
SLPGTMSAAVFGTIMDIEEPACGFGVSSTPSTGPSLVPVKLPMVYYFGREKADEDLPLWK
DLAAKLASSVRAKFATDDAVRSAGLLLDTPGVETGKDDLEMLQHAIAEFAINVVVVIGSA
ELHTQLQRELGNQKAPHGEPITVLFLEKSQGVVTRDKDFMRSSQNAAIKEYFFGDSKRTL
SPATQSISFNDVAIFRATEDADFYDGQQTLEPAEISAEMSHWTLAVMNASVNDPPETIRQ
APVMGQWKTW
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattccgggtctgggtcagtatacgacacagcccaccgcatctacctcgcgcact
attaccttgcgcccgttctgggaatggcgcttcgatctccctcataacaacagcagcgtc
tctgtacgcctagtcaatggaactgccgagcgcgatggaaccgagcttgccctcaaccat
acctacaccttctcacgtaccaagtctaagattcttacatattcgggttgtactctggaa
atcagcggtcaatgcaatgatcatgttgctcaatatgcgacaccggaagaatccccagcg
ttggcgcatctaaacctacatttcgcgttacagacacagaggactgctgctacaagtcag
ctcaagaacggcggaaatgccataaacaatgatactagtctgggacggggccctcgagta
atggtgtgcggcccggccagcagcggcaaaacgaccctagtgcggacccttgcggcattg
gctacgcgtaccggggcacaaccgctcgtcgcaaatgttgacccgagggagggcttgctc
tctctgcctggaacgatgagcgcagctgtgtttggcacgatcatggacattgaagagcca
gcctgcggatttggcgtttcaagcacccccagcacaggtccaagcttggttccggtgaaa
ctacccatggtttattatttcggaagagaaaaggccgatgaggacctgccattatggaag
gatcttgcagcaaagctggcgagctcggtgagggccaagttcgcgacagatgacgctgtc
agatcggcaggtctgctgttagacactccgggcgtcgaaacggggaaagatgacttggaa
atgctgcagcatgccattgccgagtttgcaatcaacgttgtggtggttattggatctgcg
gaactccacacgcagctacaacgcgagcttggaaatcagaaggcgccgcatggcgagcca
attactgttcttttcctagaaaagtcgcagggagtggtaactagagataaggactttatg
agatctagtcagaacgcggccataaaggagtacttctttggtgattcgaagaggacttta
agcccagcgacacaatccattagttttaatgacgtggccatctttcgggccacggaagat
gctgatttctatgatggtcaacaaactcttgaacccgccgagatctccgcagagatgtca
cactggacgcttgcggtcatgaatgcatccgttaacgatccgccggagacgattcggcag
gccccagtaatgggtcagtggaagacttggtaa
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integrated database retrieval system
