Crotalus tigris (Tiger rattlesnake): 120299576
Help
Entry
120299576 CDS
T08476
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120299576 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120299576 (POLR1B)
Enzymes [BR:
ctig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120299576 (POLR1B)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120299576 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
120299576
NCBI-ProteinID:
XP_039180453
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MDAAGKWRSLPSGPSLKHLTAPDYGLPREQQRPALQDIARAHIESFNYAISEGLSRAVQD
IPPLEFVFKNDRITLAFSGATISPPMVPKGSICKELKVYPAECRARRSTYRGKLTADISW
SVNGIPKGIIKQTLGNIPIMVKSKFCHLHSLSPKALIQHHEEEEEMGGYFIINGIEKVIR
MMIMPRRNFPLAIIKPKWKSRGPGYTQYGVSVHCVRDEHTAVNMTLHYLDSGSVMVNFIY
QRELFFIPLGFLLKALVDFSDFQIFQELIKGKENDTFYKNCVSQMLRLVTEDGCVTQKQV
LIFLGQRFRVKLNLPDWYSNERVGDFLFNQCICIHLKTKAEKFYLLCLMTRKLFTLAKEG
CMEDNPDSLMNQEVLTPGQLYLMFLKEKMETWLHSVKLALDKKAQKSNITITSENMIKIL
GMGVDLTRMLEYLLATGNLRSKSGLGMLQVSGLCVIADKLNFFRYLSHFRCVHRGAAFMK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAPCEIVTQTFHTVSLLPLLCSLGVT
PVDGVPNQPYAECYPVTLDGALVGWIEKDQAPDLVETFRHFKAMQEKKIPGWTEVVLIPM
TGKPSLYPGLFIFTTACRMMRPVQNLVLGKEEWIGTMEQVFMNIAVSQDEIEPGLTTHQE
LFPYSMLSVVACFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFPYRSDDKLYRLQTPQSP
LVRPSIYDYYNMDSYPIGTNAVVAVISYSGYDMEDAMILSKSSWERGFAHGSIYKTERID
LAEKVKQGEDNLVFGIGHDKPVQNLDLDGLPHIGARLQYGDPYYSYVNLNTGESFVTYHK
NKEICIVDNIKVCGNDTGTGRFKCVCITFRIPRNPTIGDKFASRHGQKGILSRLWPAEDM
PFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSASLHGLCHDATPFTFSEENSAVEYF
GKLLKAAGYNYYGTERMYSGVSGVELEADIFIGLVYYQRLRHMVSDKFQVRTTGARDKVT
NQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVDCGSLLSPLLK
APPSWSTMRARQYVCASCDQSSTIETIAVPYVFRCFVAELAAINVKVKLDVQ
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgcgggtaaatggaggagtttgcccagcggtcccagccttaagcatcttacg
gcgccggactacggcctgcccagagagcaacagcggcctgcccttcaggatattgcacgg
gctcatattgagtcgttcaattatgctataagcgaaggactgagccgtgccgtgcaggat
attcctcctttggagtttgtttttaagaatgatcgaattactttggccttttcaggggcc
acaatcagccctcccatggtaccaaaagggagtatatgtaaagagctgaaagtttatcca
gcagaatgtcgagcacgtagaagtacctaccgtgggaaactgactgctgatatcagctgg
tcagtgaatggaattcctaaaggaattattaaacagacccttgggaatattccaattatg
gtgaaatctaaattctgtcatcttcatagcctttctcccaaagcgcttatccaacatcat
gaagaagaagaggaaatgggtggttatttcataattaatggaatagaaaaggtgataaga
atgatgattatgcctcggcgcaactttcctcttgcaattataaaaccaaaatggaaatct
agaggcccgggctacacacaatatggggtctcagtgcactgtgttagagatgaacataca
gctgttaacatgaccttacactatcttgatagtggctcagtgatggtgaacttcatctat
cagagggagctattctttatcccgctggggtttctccttaaggcattggttgatttctca
gactttcagattttccaagaactgattaaagggaaggaaaatgatactttttataagaac
tgtgtctctcaaatgctgaggctggtcacagaagatggctgtgtgacacagaagcaagtg
ctgatcttcttggggcagcgcttcagagtaaaattgaaccttcctgattggtactctaat
gaacgtgttggagacttccttttcaaccagtgcatctgcatacatttgaaaacgaaagct
gagaaattctacttgctttgtctcatgacgcgaaagctttttactttagccaaagagggt
tgcatggaggacaatcctgacagcttaatgaatcaagaagtgttgaccccaggacaactt
tacctcatgtttttaaaggagaagatggaaacttggctacactcagttaaactagcatta
gataagaaagctcagaagtcaaatataacaattacttcagaaaacatgataaagattctt
ggcatgggagtagatctcacccggatgcttgaatatctcctggcaactggtaacctgcgc
tcaaagtcaggtttgggcatgctgcaagtgtcaggtctatgtgtgatagcagacaagctg
aacttcttccgctacctctcccacttccgctgcgtgcacagaggagctgctttcatgaag
atgagaaccacaacagtgcgcaagctgttgccagagtcctggggcttcctttgtcctgtc
cacacgccagatggcgagccttgtggcttgatgaaccacatgacagccccctgtgagatc
gtaacccagacattccacactgtatctctgctaccgttgctttgctctttaggtgttacc
ccagttgatggtgtaccaaaccaaccttatgctgaatgttatccagttacattggatgga
gctctggtgggctggatagagaaggatcaggctcctgatcttgtggagactttcaggcac
ttcaaagcaatgcaagaaaagaaaattccaggttggacagaagtggttcttattccgatg
acagggaaacccagtctctacccaggactttttattttcactaccgcttgtaggatgatg
cgtcctgtacaaaacctggtgttggggaaagaagaatggattggtacaatggaacaggta
ttcatgaacattgcagtgtcccaggatgaaattgaacctgggttgaccactcatcaggag
ctttttccctatagcatgctaagtgtggtggcatgtttcattcctttttctgatcacaac
caaagtccaagaaacatgtaccagtgtcagatgggtaagcagacaatgggttttccactt
ctgaccttcccgtatcgatctgatgacaaactatatcggcttcagactcctcaaagcccg
ttagttcgtccatccatatatgattattacaatatggattcgtatcccatcggaacaaat
gcagttgttgctgtgatctcctatagtggttatgatatggaagatgcaatgatcctgagc
aagtcttcttgggagagaggatttgcacacggcagcatctacaagacagaacgcattgac
cttgcagaaaaagtaaagcaaggagaagacaatctagtgtttgggattgggcatgataaa
cctgtgcagaatttggacctggatggcctgccccacattggagctagacttcaatatggt
gatccttactatagctatgtgaatctcaacacaggggaaagctttgtgacctaccataag
aataaggaaatttgtattgtggataacatcaaggtgtgcggcaatgatactggaactgga
agattcaagtgtgtatgcatcactttcagaataccccggaatccaacaattggggacaaa
tttgccagccgtcacggacagaaaggcatcttaagccgattgtggccagctgaagacatg
ccctttaccgaaagtggaatggtgccggacatcctcttcaaccctcatggttttccatcc
agaatgaccattggcatgctgattgagagcatggcaggaaaatctgcctcgcttcatgga
ctctgtcatgacgcaaccccgtttacattttctgaagagaattccgctgttgaatacttt
ggcaagctgctgaaggctgctggctataattactatgggacagagagaatgtacagtggg
gtatctggagtagagcttgaagcagacattttcattggtcttgtgtattatcagcgcctg
aggcacatggtttctgacaaatttcaggtgaggactacaggagcccgagataaagtcacc
aaccagcccattggaggaaggaacgttcagggtggcatccgctttggggagatggagcgg
gatgctctgttggctcacggcacgtcctttttgctgcatgaccgtctcttcaattgctca
gatcgttcagtggcccatgtttgtgttgactgcggtagtctcctctcacctctcttgaaa
gctccaccatcctggtccaccatgcgtgcccgacaatacgtttgcgcctcttgtgaccaa
agtagcaccattgaaacaattgctgtcccttatgtcttccgctgctttgtggcagaattg
gctgccattaatgtaaaagtgaagcttgatgtacagtaa
DBGET
integrated database retrieval system
