Crotalus tigris (Tiger rattlesnake): 120317503
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Entry
120317503 CDS
T08476
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120317503 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NODP
NOD
Ank_3
Ank_5
Ank_4
EGF_3
DL-JAG_EGF-like
cEGF
CagA_N
Motif
Other DBs
NCBI-GeneID:
120317503
NCBI-ProteinID:
XP_039220089
LinkDB
All DBs
Position
Unknown
AA seq
2521 aa
AA seq
DB search
MQPLRGGSRRRRRRLPGLLLLLAVLPAFAAGLRCTQPSESCLNGGKCETYQNGTGACLCS
SDFVGHRCQFQNLCLSSPCKNGGTCHPVVDGNTADYVCSCHLGYIDKLCLTMEENACLSS
PCRNGGSCDLVTLTEYKCSCPPGWSGKTCQQADPCASNPCANGGQCVPFESSYVCRCPQG
FHGATCKEDLNECSRTPPICKNGGTCVNEIGSYQCHCRPAYTGSNCEHLYVPCNPSHCQN
GGTCQQTGDVAYECTCLAGFAGQNCEENLDDCPGNSCRNGGTCVDGVNTYNCQCPSEWTG
QYCAEDVDECQLIPNACQNGGTCHNTHGGYNCVCVNGWMGEDCSENIDDCASAACSPGAT
CHDRVASFYCECPHGRTGLLCHLDDACISNPCNEGSNCDTNPVTGRAICTCPSGYTGPAC
NLDVDECLLGANPCEHAGKCLNTEGSFQCQCQAGYSGPRCEIDVNECSSNPCQNDATCLD
QIGVFQCICMPGYEGVYCEINTDECASSPCLHNGNCVDKINEFACLCPVGFNGHLCQHDI
DECASTPCKNGAKCVDAPNAYVCECTEGFSGTHCETDINECDPDPCHYGTCQDGIASFTC
LCQPGYTGHLCDVNINECQSQPCKNGGTCQDRNNAYTCSCLKGTTGPNCEINLDECASNP
CDYGKCVDKINGYECACEPGYTGRMCSINVDECENSPCHNGGTCRDGINGFTCLCPEGFH
DPLCLSEVNECSSNPCVHGRCHDGLNGYKCDCDPGWSGTNCDINNNECESNPCVNGGTCK
DMTSGYLCTCQEGFSGPNCQVNINECASNPCLNQGTCIDDVARYQCNCLPPYTGPTCREV
LAPCAEGPCKNGGQCRESEDYESFLCTCLPGWQGQTCEVDINECVKSPCRNGATCQNTNG
SYRCVCKSGFTGESCETDIDDCQPNPCHNGGSCSDGVTGFVCNCLAGFQGPKCQEDIDEC
ASNPCENGANCTDCVNSYTCTCPSGFSGIHCEHNTPDCTESSCFNGATCVDGINTFTCVC
PPGLTGIYCEHDINECDSQPCLNGGTCQDSYGTYKCVCPQGYTGLNCQNLVRWCDSSPCK
NGGRCWQVNNHYRCECPSGWTGLYCDIPNVSCEVAARRQGLDVIRLCRNSGLCVDRGNTH
LCHCQPGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGRNCSEEIKECLS
HPCQNGGTCIDLLNTYKCSCPRGTQGVHCEINIDDCSPATDPQSLTPKCFNQGKCVDKVG
GYSCICLPGFVGERCEGDVNECLSNPCDPRGTQNCVQRVNDYKCECRPGYTGRCCETLLN
GCQTRPCRNGGTCAVASNTKQGYICRCPPDLNGATCENDVHSCGMLRCLNGGTCVSTAQQ
TRCLCAPGFTGPECQFPSHSPCQSAPCYNEGTCQFTQEPPHYRCLCPINFNGLHCHILDF
EFPGGPGQDITPPPVEEKCEIPGCPSLAGNKICDAKCNNHACGWDGGDCSLNFNDPWKNC
TQALQCWNYFNDGKCDVQCNNSGCLYDGFDCQKVELQCNPLYDQYCKDHFSDGNCDQGCN
SAECEWDGLDCANHVPQKLADGTLVVVVLVSPEILRNYSLNFLRELSRVLHTNVVFKKDT
NGEDMIFPYFGNPEELKKHRIKRSAGDWPDVSEVVVSMKAALHARISGRPKRELDQVEIY
GSIVHLEIDNRQCVQSSSQCFQSATDVAAFLGALASSGNLDIPYKIEAVKSETADSPRSS
QWYPMYVVAPLVFLLFCVGIGVLATRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSV
GLKPLKNASNGTLMDDNQNEWGDEETLNTKKFRLEEQVMLPDDQTDHRQWTQQHLDAADL
RISSMAPTPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETANSEEEEDTPAVVSDF
IYQGANLHSQTDRTGETALHLAARYARSDAAKRLLEASADANIQDHMGKTPLHAAVSADA
QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLISCHADVNAVDDLGKSALH
WAAAVNNVDAALALLKNGANKDMQNNKEETPLFLAAKEGSYETAKVLLDSFANRDITDHM
DRLPRDAAQERMHHDIVRLLDEYNLVRSPPLHNGPLATLSPPLCSPGGYLGHLKPGGQSK
KARKPSTKGLSCNGKEPKGLKAPRKKSQEGKGCLLDGSGILSPVDSLESPHGYLSDVASP
PLMTSPFQASPSVPLNHLTGMADPHLSISQLNLVGKSDLGLGAGPMQPFESGASRLSHLP
VSGASTILGGASLNFALSGSQCEWLNRLQSSLVPGQYHPLRSALPQGTHPASQALPHGLL
APLHGGGPPLPPMMTYQTVPGGHLPTHSQPHLLQPQQPQQQPPPPQAHSGATNTAPQVGA
SFLGNELGQVELQQPMSGGALAVHAILPQDTQVLATSLPQGLSTTQFLTPPSQHSYPSPM
DHTPSHQLQVPDHPFLTPSPESPDQWSSSSPHSNVSDWSEGISSPPTSVQPQVGRIPEAF
K
NT seq
7566 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccctccggggagggagccgacgccgacgccgacgcctcccggggctgctgttg
ctgctggccgtgctgcccgccttcgctgcaggtttgcgatgtacccagccttccgaatcc
tgcttgaacggagggaagtgtgagacctatcaaaatggaacaggagcgtgtctatgctcc
agtgactttgtcggccatcggtgccagttccaaaatttgtgcctcagctccccctgtaag
aatggcggcacctgccaccccgtggtggacggcaacacggctgattacgtctgttcctgc
cacctgggctacatcgacaagctgtgcctgaccatggaggagaacgcctgcctgagcagc
ccctgccgcaacggagggagctgtgaccttgtcaccctgaccgagtacaaatgcagctgc
cctccaggctggtcaggcaagacgtgtcagcaggcggatccctgtgcctctaacccatgt
gccaacggcggccagtgcgtgccctttgagtccagctatgtgtgcaggtgcccgcagggc
ttccacggggccacctgcaaggaagacctgaacgagtgcagccggacaccccccatctgc
aagaacggcgggacctgcgtcaacgagatcggctcctaccagtgtcactgccggccggcc
tacacgggctccaattgcgagcacctctacgtgccctgcaacccctcgcattgccagaac
gggggcacctgccagcagacgggagatgtggcctacgagtgcacctgccttgcaggcttc
gcgggccagaactgtgaagagaatcttgacgactgtcccggaaacagctgcaggaacgga
gggacctgtgtggacggggtgaacacctacaactgccagtgcccatctgagtggacaggc
cagtattgtgctgaagatgtggatgagtgtcagttaatccccaatgcttgccagaacggc
ggcacctgccacaacacccacgggggctacaactgtgtctgtgtcaacggctggatgggc
gaggactgcagcgagaacattgacgactgcgccagtgccgcttgctccccaggggccacg
tgccatgaccgggtggcctctttctattgcgagtgcccacatgggcggacaggtttgctg
tgccacctggacgacgcctgcatcagcaacccttgcaacgaaggttcgaactgcgatacc
aacccggtcaccgggagggccatctgcacctgcccctcggggtacacggggcccgcctgc
aacctggacgtggacgaatgcttgctgggtgccaacccctgcgagcacgctgggaaatgc
ctcaacacggagggctccttccagtgtcaatgccaggcgggctactcgggcccacgctgc
gagatcgacgtcaacgagtgctcctccaacccttgccagaacgatgccacctgcttggac
caaatcggggtcttccagtgcatttgcatgccaggctacgagggtgtgtactgtgaaatc
aacacggacgagtgtgccagcagcccctgtctgcacaacgggaactgcgtggacaagatc
aacgagtttgcttgcctgtgccctgtgggatttaatggtcacctgtgtcaacacgacatt
gatgaatgtgccagcacaccctgcaaaaacggagccaaatgtgtggatgcgccaaacgct
tacgtgtgtgaatgcacagaaggcttttccggtacccactgtgagacggacatcaacgaa
tgtgaccctgatccctgccactacggcacctgccaggatggtattgcctcctttacctgc
ctctgccagcctgggtacactgggcacctctgtgacgtcaacatcaacgagtgccaaagc
cagccctgcaagaatgggggcacctgtcaggacaggaacaatgcctacacctgctcctgc
ctcaaaggcactacaggacccaactgtgaaatcaacctggacgagtgtgccagcaacccg
tgtgattatggcaaatgtgtggacaagatcaacggttacgaatgcgcctgtgagccagga
tacacagggaggatgtgcagcatcaacgtggacgagtgcgaaaacagcccttgccacaac
gggggcacctgccgggatggcatcaacggtttcacctgcctgtgcccggaaggcttccat
gaccccttgtgcctctcggaagtgaacgaatgcagcagtaacccttgcgtccacgggaga
tgccacgatgggctgaacggctacaagtgtgactgcgacccaggctggagtgggacaaac
tgtgacatcaacaacaacgaatgtgagtccaacccttgtgtgaacggtggaacctgcaag
gacatgaccagtggctacctttgcacctgtcaggagggattcagtggacccaactgccag
gtcaacatcaacgaatgtgcctccaatccttgcctgaaccaggggacgtgcatcgatgac
gttgctcgctaccagtgcaactgcctcccgccctacactggtcccacctgccgagaagtg
ctggcgccctgcgcggagggtccctgcaagaatggcggccaatgcagagagtcggaggac
tacgagagcttcttgtgcacctgccttccgggatggcaagggcaaacttgtgaggttgac
atcaacgagtgtgtcaagagcccctgtcggaatggtgccacgtgccaaaacaccaacggg
agctaccgctgcgtgtgcaaatccggcttcaccggggagagctgtgaaactgacatcgat
gactgtcaacccaatccctgccacaatgggggctcctgttctgacggcgtcaccggcttc
gtctgcaactgcctggcgggcttccagggccccaaatgccaggaagacattgacgagtgc
gccagcaacccctgtgagaacggggccaactgcaccgactgcgtgaacagctacacctgc
acgtgtccgtccggcttcagcgggatccactgtgagcacaacacacccgactgcacggag
agctcctgcttcaatggggccacctgtgtggacggcatcaacaccttcacctgtgtctgc
ccacctggcctcaccggcatttattgtgagcacgacatcaatgagtgtgactcccagccc
tgcttgaatggcgggacgtgccaggacagctacgggacttacaaatgcgtctgcccgcag
ggctacaccggactcaattgccagaatctggtccgttggtgcgactcctctccctgtaag
aacggaggcaggtgctggcaggtcaacaatcactaccgctgcgagtgcccgagtggctgg
accggcctgtactgcgacatacccaacgtctcttgtgaggtggccgcccgacggcaaggg
ctggacgttatccgcctgtgcagaaactccgggctctgtgtggaccggggcaacacccac
ctgtgccattgccagcctggctacacgggtagctactgtgaagagcaagtggacgagtgc
tccccgaacccttgccagaacggggcgacctgtacggactacctgggcggctattcgtgc
gagtgcgtggccggctaccatggccggaactgctcggaggaaatcaaggagtgcctttcc
catccctgccaaaatggcgggacctgcattgacctgctcaacacctacaagtgctcttgt
cctcgtggaactcaaggcgtccactgcgagatcaacattgacgactgcagccctgccaca
gacccccagagcctgaccccaaagtgtttcaaccaagggaagtgcgtcgacaaggtgggg
ggctacagctgcatctgcctgccaggctttgttggggagcgctgcgagggggacgtcaac
gagtgcctctccaacccctgcgacccgcgggggacccagaactgcgtgcagcgcgtcaat
gattacaagtgtgaatgccgcccaggctacacgggacggtgctgcgaaacgctgctgaat
ggctgccagaccagaccctgtcggaacgggggaacttgtgccgtcgccagcaacacaaaa
cagggttacatctgcaggtgtcccccggacttgaacggcgccacttgtgaaaacgacgtg
cacagctgtgggatgctgcggtgcctgaacggcgggacctgcgtttccaccgcccagcag
accaggtgcctgtgcgcgccgggtttcaccggtcccgagtgccagttcccctcccacagc
ccctgccagtccgccccctgctacaatgagggcacctgccagttcacccaagagccgccc
cactaccgctgcctctgccccatcaacttcaacggcctccactgccacatcctggacttt
gaattcccggggggtcccggtcaggacatcacccctcccccggtggaggagaagtgcgag
atcccgggctgccccagcctggccggcaacaagatctgcgacgccaagtgcaacaaccac
gcctgcggctgggacggcggggactgttcgctcaacttcaacgacccctggaagaactgc
acccaggccctgcagtgctggaactacttcaacgacggcaagtgtgacgtccagtgcaac
aacagtggctgcctgtacgacggctttgactgccagaaggtcgagctgcagtgcaaccct
ctctacgaccagtactgcaaggatcacttttctgacggcaactgcgatcagggctgcaac
agcgccgagtgcgaatgggatggcctcgactgtgccaaccacgtgccccagaagctggcc
gacgggaccctggtggtggtggtgctggtcagccctgaaatcctgaggaactactccttg
aacttcctgcgggagctcagccgggtcctgcacaccaacgtggtcttcaagaaggacacc
aatggcgaggacatgatcttcccttattttgggaacccagaagaactaaaaaaacaccgc
atcaagaggtcggcgggcgactggccagatgtgtcggaagtggtggtcagcatgaaggca
gccctccacgcgaggatcagtgggaggccgaagagagagctggaccaggtggaaatctac
gggtccattgttcacctggaaatcgacaaccgccagtgtgtccagtcttcttctcagtgc
ttccaaagtgccaccgacgtagcggcgttcctgggtgccttggcctcaagcggcaacttg
gacattccctacaagatcgaggctgtgaaaagcgagacggccgattccccccggagcagc
cagtggtatcctatgtatgtggtggccccgttggtcttcctcctcttctgcgtgggcatc
ggcgttttggcaactcgcaagcggcggagggaacatgggcagctgtggttccccgaaggc
ttcaaagtgacggagtccagtaagaagaaacggcgggagccactgggggaggattccgtg
gggctgaaacccttgaaaaatgcttcgaacggcaccctgatggacgacaaccagaacgag
tggggagacgaggagacgctcaacaccaagaaattccgactagaggaacaggtcatgttg
cccgatgatcagactgaccaccggcagtggacgcagcagcacctggatgcggccgacctg
cgcatttcctccatggcccccaccccaccgcagggggagattgacgccgactgcatggac
gtcaacgttcgagggccagacggattcacgcccctgatgatcgcttcctgcagcggagga
ggcctggagaccgccaacagcgaggaggaggaggacacccccgccgttgtttcggatttc
atctaccagggggccaacctgcacagccagacggatcgcacgggggagacggcccttcac
ctggcggcgcgttacgcccgttcggatgcggccaaacggctgctggaagccagcgctgac
gccaacatccaggaccacatgggcaagacgccgcttcacgcagccgtgtcggcagatgcc
cagggcgtctttcagatcctgatccggaacagggccaccgacttggatgcccgcatgcat
gacggcaccacgcccctgattttggcggctcgcttggcggttgaaggcatgctggaagat
ctcatcagctgtcacgccgatgtcaacgccgttgacgatctaggcaaatctgccctccac
tgggctgcggctgtgaacaacgtggatgccgccctggcgctgctgaaaaacggcgctaac
aaggacatgcaaaataacaaggaagagacccccttgttcttggcagccaaagaagggagc
tacgagacggccaaagtcctcctggacagctttgccaaccgggacatcacggatcacatg
gaccgcctgccccgggacgcggcccaggagcgcatgcaccacgacatcgtgcgcctgctg
gacgagtacaacctggtgcggagcccgcccctgcacaacgggcctctggccaccctctcc
ccgcccctctgctcacccggcggctacctgggccacctgaagccaggcgggcagagcaag
aaggcccgcaagccgagcacaaaagggctgagctgcaacgggaaggagccgaaggggctg
aaggccccccggaagaagtcgcaggagggcaaggggtgcctgctggacggctccggcatc
ctctccccggtcgactccctggagtctccgcacggctacctctcggacgtggcctccccg
cctctgatgacctcccccttccaggcctctccttccgtgcccctcaaccacctgaccggc
atggcggacccccacctcagcatcagccaactcaacctggtgggaaagtcggatctgggc
ctgggggccggaccgatgcagcccttcgagtcgggggcctcccgcctgtcccacctgccc
gtctccggcgccagcaccatcctgggcggggcctcgctcaacttcgccctcagcgggagt
cagtgcgagtggctgaaccgcctgcagagcagcctggtgcccggccagtaccaccccctg
aggagcgcccttccgcagggcacgcaccctgccagccaggccctgccccacgggctgctg
gcgcccctgcacggcggcggcccccctctgcctcccatgatgacctaccagaccgtcccc
ggtggccacctgcccacccactcccagccacacctgctgcaaccccagcagccgcagcag
cagccgcccccaccgcaagcccacagtggggccacgaacactgccccccaagtgggggcc
agcttcctcgggaacgagctgggtcaggtggagctgcagcagccaatgagtggcggcgcc
ctggctgtccacgccatcctgccgcaggacacccaggtgctggccacctccctcccccag
ggcctgagcaccacccagttcctgactccgccttcccagcacagctacccctcccccatg
gaccacacacccagccaccagctccaggtgcccgaccaccccttcctcacgccttcgccc
gagtcgccggaccagtggtcaagctcctccccccattccaacgtctctgattggtcggaa
gggatctcgagcccgcccaccagcgtgcagccccaggtggggcgcatcccggaagctttc
aagtaa
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integrated database retrieval system
