Crotalus tigris (Tiger rattlesnake): 120319206
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Entry
120319206 CDS
T08476
Symbol
PRDM16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16 isoform X1
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig00310
Lysine degradation
ctig01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120319206 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120319206 (PRDM16)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120319206 (PRDM16)
Enzymes [BR:
ctig01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
120319206 (PRDM16)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120319206 (PRDM16)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120319206 (PRDM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_11
SET
zf-C2H2_6
zf-H2C2_5
Zap1_zf1
zf-BED
zf-C2H2_8
Motif
Other DBs
NCBI-GeneID:
120319206
NCBI-ProteinID:
XP_039223745
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MRSKARARKLPKSDHEIVTNMYETEAELLAGESGEEETEDSVMSPIRVGPPSPFPTGEDF
NPKEGSPYEAPVYIPDDIPIPPDFELRESSIPGAGLGIWTKKKLDVGERFGPYLAFPRTM
LKETNFGWEQMLTDSESGLQDGCIKKIGEELDLSKFCMDANPTSSGNWLKYIRVARSSEE
QNLVVCPINDQIYYKVIRETEPGEELLMYAKEGTLSAENLPPNLEEVHTFRCEDCDELFQ
SKMEMRRHKKYSCHAVGSLYESLTEEIKQEGGMEDEPVHECKDCERMFPNKYSLEQHMII
HTEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVG
ARAHACPDCGKTFATSSGLKQHKHIHSTVKPFIYALGEVCHKSYTQFSNLCRHKRMHADC
RTQIKCKDCGQMFSTTSSLNKHRRFCEGKNHYNPGGLFAPGLPLTPSSMMDKSKASPNLN
HAGLGFGEYFPSRPHPGALPFSPAPPAFPALAPGFPGIFPPSLYPRPPLLPPTPLLKSPI
NHTQEAKLPSPLGHSPLPLMSAISNSSHPLPVEERFNSTPLGNSYLEKLKARTSDLSDAS
DFEDVNTTTGTDLETTTGTGSDLESDAESEQDKMKEKSKAGESKPDFGSGSVPTSSANNM
SDLPIFYSQHTFFPPPEDQLLPMMGAANDSIKAIASIAEKYFGPGFMGMQEKKMGTLPYH
SMFPFQFLPNFSHSVYPFTERTLNHSLMVKAEPKSPRDLHKIGGPCLESPFDLTTKPKES
KVAQVLPARHAGEEQPLDLTISSRIRASHNGSRDSRKNHVYGERKLVASDGIPKMTEAQM
LPQPSLHYAKPSPFFMDPIYSRVEKRKVADSVGALKEKYLRPSPLLYHPQMSAIETMTEK
LESFAALKTDAGGAPLPPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSANL
TRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRH
LKKHEHENVPVSQHAGVITNHLGNHASSPASESDHHALLDEKEDAYFSEIRNFIANSEMN
QSSALSEKRTPEIRNADGAPHGLPNDKGEDVDEEEDELEEEDDDSLTGKSQDETVSPAAE
PQGGYEEEEEEEATSLTMSFNRAQRCTEENEAGLLDLEQMSQFGKGLDLHQASEEAFDVK
AVYNSTLDSEALKQTLFRQAKNQAYAMMLTLTENAPFHPSSQNPLDAWLNMAGAASEPGA
FNSVGHL
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccaaggcgcgggctaggaaactgccgaaaagcgaccacgaaattgtgaccaac
atgtatgaaacggaggcagagctcctcgccggcgaaagcggagaggaggagacggaggac
agcgtcatgtcccccatccgcgtcggaccaccctcccctttccccacgggcgaggacttc
aatcccaaagaaggctccccgtacgaagcccccgtctacattccggacgatatcccgatc
ccgcctgactttgagctgagagaatcctccattccaggagccggactgggcatttggacc
aaaaagaagctggacgttggagagagattcgggccgtacctggcttttcccaggacgatg
ttgaaggagaccaactttggatgggagcaaatgctgacggattccgagtcgggcctgcaa
gacggctgcatcaaaaagattggcgaggagctggacctcagcaaattctgcatggatgcc
aacccaacgtccagcgggaactggttgaaatatatccgggtcgctcgttcgagcgaagaa
caaaatttagtggtgtgtcccattaatgaccagatttattataaagttattagagaaaca
gagccgggagaagagctgctgatgtacgcgaaagaaggaaccttgtctgctgaaaacctg
ccgcccaatttggaagaagttcacacattccgttgcgaggactgtgacgagctcttccag
tcgaaaatggagatgaggcggcataagaaatattcctgccatgccgtcggatctctgtac
gagtccctgacggaggagatcaagcaggaaggagggatggaggacgaaccggtccacgaa
tgcaaagactgtgaaaggatgtttccgaacaagtacagcttggaacagcacatgatcatc
cacacggaagaaagggaatacaagtgtgaccagtgtcccaaggccttcaactggaagtcc
aacttgatccgtcaccagatgtcacatgacagtggcaaaagatttgagtgtgaaaattgc
gtgaaggttttcacggaccccagcaatctccaaaggcacattcgctctcagcacgtcggc
gcgcgggcgcacgcttgcccagactgcgggaagaccttcgccacctcttccggcctcaaa
caacacaagcacatccacagcactgtgaagcctttcatatatgctttaggcgaggtctgc
cacaaatcctacacgcagttctccaacctctgccgacacaagcgcatgcacgccgactgc
cggactcagatcaaatgcaaggactgtgggcagatgttcagcaccacctcctcgctcaac
aaacaccggcggttctgcgaaggcaagaaccactacaaccccggaggcctttttgcacca
ggtttgcctctgacgcccagctccatgatggacaagtctaaggcatcgcccaacctcaat
catgccggactcggcttcggcgagtacttcccctcccggccacacccgggagcactcccg
ttctcgcctgctccccctgcgttcccggctctcgcccctgggtttccaggtatcttccct
ccctcgctgtacccgaggccgcctctcttgccccccacacccctgctcaagagccccatc
aaccacacccaagaggccaaactccccagccctctcggccactctccgctcccgctgatg
tccgccatcagcaacagcagccacccgctacctgtggaggagaggttcaacagcacccct
ttggggaactcctacttggagaagctcaaagccaggactagtgacttgtcagacgccagt
gactttgaggacgtcaacactacgacgggcaccgatctggagaccaccaccggcacaggc
tcggacttagagagcgacgcggagagtgagcaggataaaatgaaggagaaaagcaaagct
ggggagagcaagccggattttgggagcggttcggtccccaccagttctgccaacaacatg
agcgatctccccatcttctactcccagcacacattcttccctccgcccgaggatcagctg
ctcccgatgatgggggccgcgaacgattccatcaaggccatcgcttcgattgccgagaaa
tactttgggcccggatttatgggtatgcaagagaaaaaaatggggactcttccctatcat
tccatgtttcccttccagttccttcccaacttctcccactcggtctaccctttcacggag
cgaaccctcaaccacagtttgatggtcaaagccgaaccaaagtcgccccgggacctgcac
aaaatcggcgggccctgcttggagtcgcccttcgaccttaccaccaagccgaaagagagc
aaagtggcccaagtcctgcccgcccgccacgccggcgaggaacagcctctagatctcacc
atcagcagccgcatccgggccagtcataacgggagtcgggattcccgaaagaaccacgtc
tacggtgagaggaagctggtggccagcgacgggatcccgaagatgactgaagctcagatg
cttcctcaaccttccctgcattacgctaagccctcccctttcttcatggaccccatctac
agcagggtggagaagcggaaggtggctgactcagttggagcactcaaggagaaatatctg
agaccttcaccgctgctttaccaccctcagatgtcagccatcgaaaccatgacggagaaa
ttggagagttttgctgccctgaagacagacgccgggggggctcccttgccgcccctccct
caccaccccttcaacttccggtcgccccctcccactttatccgaccccattttgcgcaag
ggcaaagaacgttatacctgcagatactgtggtaaaatctttccgcgttcggccaacctc
accagacatctccgaacacacacaggagaacagccttaccggtgtaaatattgcgaccgg
tcattcagcatttcgtccaaccttcagcgccatgtccggaacatccacaataaggagaaa
cccttcaaatgtcatctctgcaatcgctgcttcggccagcagacaaacctggaccggcac
ttgaaaaaacacgagcacgaaaatgttccagtaagccagcatgccggagtcattacaaac
cacttggggaaccacgcatcttcaccagcctccgaatcggaccaccatgcacttttagac
gaaaaagaagacgcctatttttccgaaatcagaaactttattgcaaacagcgagatgaac
cagtcgtcggctttatcagagaaaaggacgcctgaaatccggaacgccgacggcgccccc
cacggtcttccgaacgacaaaggagaagacgttgacgaggaagaggacgaactggaagag
gaagacgacgacagcctgacggggaagtctcaagacgagacggtgtcgcccgccgccgag
ccacaaggagggtatgaggaagaggaggaagaagaagccacctccctcaccatgagcttt
aaccgtgcccagaggtgtactgaggagaacgaagccggcttgttagatttggaacagatg
tcgcagtttgggaaggggctggacctccaccaggcctccgaggaagcttttgacgttaaa
gctgtctataattccaccttagattcggaggcactaaaacaaactctgttcaggcaggca
aaaaaccaggcttacgcaatgatgttgacccttaccgagaacgcccccttccatccttcc
tcccagaatcccctggatgcctggttgaacatggctggagctgcctccgagccaggagcc
ttcaactccgtcggccatctctga
DBGET
integrated database retrieval system
