Crotalus tigris (Tiger rattlesnake): 120319258
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Entry
120319258 CDS
T08476
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04010
MAPK signaling pathway
ctig04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120319258 (CACNA1H)
04020 Calcium signaling pathway
120319258 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120319258 (CACNA1H)
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120319258 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
120319258
NCBI-ProteinID:
XP_039223858
LinkDB
All DBs
Position
Unknown
AA seq
2425 aa
AA seq
DB search
MTDGERRASFQPLSRDEVRVPIASGQAPSQVPQSGEEKDEDTFSACKSIQDSLASADSST
RDPTHEGDNQVPYPALASTVFFCFSQTTRPRSWCLKLVCSPWFEHVSMLVILLNCVTLGM
FQPCQDIKCQTERCTILEAFDHFIFAFFAVEMVIKMVALGIFGHKCYLGDTWNRLDFFIV
IAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFF
VFFIFGIVGVQLWAGLLRNRCFLDSHIQRTHNLTFLHKYYRPEEGEENPFICSSLRDNGM
QKCSSIPNRKEYKMDCTLTADAYNPHLDSLDLGSRNACINWNQYYNACRTGDLNPHNGAI
NFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIA
TQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTLRLY
NNWQSKRRKKVNPNSGGDNGQGQQSGKRRITSIHHLIHHHHHHHHHHYHIGNGSPQGPRS
NPGICDLELDVIKPGGQLMLPPPSPSHPGGRAADTESIHSIYHADCHVEGTSVKCKSSSI
AAGSKAANRGSMNYPTILPSPANKASVPPLTKGKKNEGSEVTSPMPMVSSPAHLNADCYG
KLHHLVGERGLCRTSSILSGLNVPCPLPGPQANTLSCELQNCPFCASILEDPEFEFSEAD
SYESGEDNNGIYEFTQDVKHGDFRDQIQQQRNKKKKKRKPAKERNKLTKVWKAFGNKLKR
IVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFG
IWGYIKNPYNIFDGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVL
MKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGLRTETGDTLPDRKNFDSLLWAIVTVF
QILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSD
TDEDKTSTNFEEEFEKLKELRASEMKMYSLAVTPNGHLEGKGSMPPPIIMHTAATPMPTP
KGSPHMDSAYPLGDSRRGCNVSVDPLSFDQKSLSSLRSSPCANWGSRRSSWNSLGRAPSL
KKKSQCGERESLLSGEGKGSTDDEAEETKLSTLSRRPLHHRAESLDCRGGLDLPELLQVP
RVHPPVAMLPLEYQDCNGKMLQVPSELYLHLDSRKEDPFDYDENMEDSFCYRIRKSLEPY
KPKWCKNHEDWSLYLFSPHNRLRANCQKVITHKMFDHVVLVFIFLNCITIALERPDIDPN
STERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGEHTYLQSSWNVLDGILVFVSIIDIIV
SMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFF
IIFGILGVQLFKGKFYHCEGADIRNISTKSDCRKAHYKWVRRKYNFDNLGQALMSLFVLS
SKDGWVNIMYDGLDAVGIDQQPSRNHNLWMLLYFISFLLIVSFFVLNMFVGVVVENFHKC
RQHQEAEEARRREEKRLRRLEKKRRSKAIYMSEAQRRPYYADYSPARKYIHSLCTSHYLD
LFITFIIGVNVITMSMEHFDQPKSLEEALKYCNYLFTFVFVVEAILKLVAFGFRRFFKDR
WNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLD
TVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFNNFGMAFLT
LFRVSTGDNWNGIMKDTLRECHKDDKHCLSYLPLISPIYFVTFVLIAQFVLVNVVVAVLM
KHLEESNKEAKEDAEMDAEIELEMSRGVGTPERTMDGRQTSSKGGSPVLVKHKAMGASAA
AVGIREPQNLLTLRKISVARMHSLPNDSYMFRPVMPAKLPFPLHEGELEAFSYKSPRGSI
TSIRSQPLVTSSSLRIPQLAFRPTTPPPSHNMGAPWKLLPPHPAPRTPSFNRLLCRQEAV
RKDSLDSSAVESKQCVQAEMRENPPLKKLSHSILGAPQPPPAPTSLPGSPPLPHPSPSHP
SSIHTHKDTFSQHNISNRRSTHGSLLDTSLFESSDLADEEVRHINSSARDWRAQLESQDC
SDSPFASPAPSPVPFRNCSTTSLTMGKGKEKDLKKFYSVDTRGFLAKPLWADDQRRHSIE
ICPSVDHRAHGFTDTSERRRLPLQVQLESEYLHGLRRKKKMSPPCISIDPPMEEESSTTT
TRTKASENSLLRRRTPSCESTAYRDTLELAEGQPGEPACKADRWAPPACRGEHLTIPSFS
YEPMDPGSMGEPCKRLLESSQASDRSVDSTPEGPELQPTDPLETHSNPSETNQEELGGAR
KCPLPQYGQVPGTPTTTEEVVDEPV
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagaggagagcttccttccagccactgtccagggatgaagtgcgggtc
cccatagcgtctggccaagcccccagccaggtcccccaatctggagaggagaaagatgag
gataccttcagtgcttgcaagtccatccaggacagtttggcctcggcagattcgtccacc
cgggatccaacccatgagggagacaaccaggtcccctaccctgcgctggcctccaccgtc
ttcttctgcttcagccagactacgcgaccacgcagctggtgcctcaaactggtctgtagt
ccttggttcgagcacgtcagcatgctggtcatcctcttgaactgcgtcaccctcgggatg
ttccagccatgtcaggacatcaagtgccagacagaaaggtgcacaatcttggaggcattt
gatcacttcatcttcgccttctttgctgtggagatggttatcaagatggtcgccctgggg
atctttggccacaaatgttacctaggagacacctggaaccgcctcgacttcttcattgtc
attgctggcatgatggaatattctctggatggacataatgtcagcctttcagccatccgg
actgtgcgggttctcaggccgttacgagccattaacagggtgccaagtatgcgcattctt
gtcaccctgctcctagacactctgcctatgttaggcaacgttctcctcttgtgttttttt
gtctttttcatcttcggcatcgtgggtgtccagctctgggctgggctgctgaggaacagg
tgtttcctagattcccacattcaaaggacacacaacctgactttcctgcataaatactac
aggccggaagagggggaggagaacccgttcatctgttcctccctcagggataacggcatg
cagaagtgctccagcatcccaaaccggaaggagtacaagatggactgtactttaaccgcg
gacgcttacaatccgcatttggactcactagacttgggcagtcgcaacgcctgcataaac
tggaaccaatattacaatgcttgcaggacgggggacttaaacccgcacaatggagctatt
aattttgataatattggctatgcttggatagctatttttcaggttataaccctggaagga
tgggttgacatcatgtattatgttatggacgcacattctttttacaattttatatatttt
atactacttataatagttggttctttcttcatgattaacctgtgcctggttgtgatagca
acacagttttctgaaaccaaacagcgggagaaccagctgatgcaagagcagcgagcccgc
tacctctctaatgacagcacaattgccagcttctccgagccgggaagctgctatgaagag
ctcctcaaatacatttgccacattttcaggaaagtcaaacggcggaccttgcgcctgtac
aacaactggcagagcaagcgtcggaaaaaagtcaaccccaacagtggtggagacaatggt
cagggccagcagagcggcaagcgacgcatcacgtccatccatcacttgatccaccaccac
catcaccaccaccatcaccactaccacattggcaacgggagcccccaagggccaaggtcc
aacccagggatttgtgacctggagctggacgtcataaagcctggaggccaactgatgctt
cctccaccttcacccagccatccaggtggtagagctgcagatacggagtccatccacagt
atttaccatgcagactgccacgtggaaggaacctcagtgaaatgcaagtcttccagcatt
gctgcaggtagcaaagctgccaatcgtggcagcatgaactaccccaccatcttgccttct
ccggcaaacaaagccagtgtccctcccttgaccaaagggaagaaaaacgagggcagtgag
gtgacctctcccatgcccatggtcagcagcccagcccatctaaatgcagattgttatggg
aagctccatcatctggtgggagaacgtggcctctgccggacctccagcattctgtctggc
ctgaacgtgccatgtcccttgcctgggcctcaagccaacactttgagctgtgagctgcaa
aactgcccattctgtgccagcatccttgaggatcctgagtttgagttcagcgaggcagac
agctatgagtcaggagaggacaacaatgggatctacgagttcacccaggatgtaaagcat
ggggacttccgagaccagatccagcagcagaggaacaagaaaaagaagaaaaggaaacca
gccaaggagaggaacaagctaaccaaggtctggaaggcctttggcaacaagctaaaacgg
atcgtggagagcaagtatttcaaccgtggcatcatgatcgccatcctcatcaacacgctg
agcatgggcattgagtatcatgaacagccggatgagctcaccaatgccctggagattagt
aacattgtcttcaccagcatgtttgctctggagatgctgctcaagcttttggcttttggc
atctggggatacatcaagaacccctacaacatttttgatggcatcattgttgtcatcagt
gtctgggagatcattggccaggccgacgggggtctttcggtgctgaggaccttccgtctc
ctccgggtcctcaagctggtgcggttcatgccggctctccgccggcagttggtggttctc
atgaagaccatggacaacgtggccaccttctgcatgctgctcatgctttttatcttcatc
ttcagcatcctgggtatgcatctttttgggtgcaagttcggcttaaggacagagacagga
gacaccctgccagaccgaaagaactttgattccttgctgtgggcaattgtcaccgtgttt
cagatcctgacccaggaagactggaatgtggtcctctacaacggaatggcctccacctcc
tcctgggctgctctctactttgtggctctgatgacctttggcaactatgtcctcttcaac
ctcttggtcgccatcctggtggaaggtttccaagctgagggcgatgccaacagatctgac
acagatgaagacaaaacatcaacgaactttgaggaagagtttgagaagctgaaggaactc
cgtgcttctgagatgaagatgtattcgctggccgtcacgcccaacggacacctggagggc
aagggcagcatgcccccgcccatcatcatgcacaccgcagccactcccatgcccacccca
aaggggtctccacacatggactcggcctaccctttgggggactccaggaggggctgcaac
gtttcagtggacccgctcagctttgaccagaaatctttgtccagcctccgcagctccccc
tgtgccaactggggcagccgccgctcaagctggaacagcctgggccgggcccccagcctc
aagaagaagagccagtgtggcgagcgggagtccttgctctcaggggagggcaaaggcagc
acagacgatgaagccgaggagaccaagcttagcaccctcagccgccgccccctgcaccac
cgggcagagtccctggactgccggggtggcttggacctgccagaactcctccaggtgccc
agagtgcaccctccggtagccatgctgcccctcgagtaccaggactgcaatggcaagatg
ctgcaggtgcccagcgagctctacctgcacctggacagccgcaaagaggatcccttcgac
tacgatgagaacatggaagatagcttctgctacagaatccgcaagagcttggagccctac
aagcccaaatggtgcaagaatcatgaggactggtccctctacttgttttccccccacaat
cgcctccgggccaactgccagaaagtcatcacacacaagatgtttgaccacgtggtcctg
gttttcatcttcctcaactgcatcaccatcgccttggaacgcccagacatcgatcccaac
agcacggaacggatattcttgagtgtctccaactacatctttacggccatttttgttgct
gagatgatggttaaggttgtggctctcggcttcttctccggggaacacacctacctccag
agcagctggaacgtcctggatggaatcctggtctttgtgtccatcattgacatcatcgtt
tccatggcatcagcaggcggagccaagattttaggggtcctacgagtacttcggctgcta
cgcaccctaagacctttacgggtcatcagcagagctccaggtctgaaactcgtagttgag
acgctgatctcttctctccggcctatcggcaacatcgtcctgatctgttgtgctttcttt
atcatctttggcattttaggagtgcagctttttaagggcaagttctaccactgtgaggga
gctgatatccgaaacatctccactaagtccgactgcagaaaagcccactacaaatgggtc
cggcggaagtataacttcgacaatttgggacaggccctgatgtccttgttcgtcctctct
tccaaagatggctgggtgaacatcatgtatgatggattggatgcagtggggattgaccag
cagcccagccggaaccataacctctggatgcttctctacttcatttccttcctcctcatc
gtcagcttctttgtgctcaacatgttcgtcggggtggtggtggagaacttccacaagtgt
cggcagcaccaggaagccgaggaggcccggcgacgcgaagagaaacggctgcggcgtctg
gagaaaaagcgcaggagtaaggcgatatacatgtctgaagctcaacgacggccctactat
gccgattattcacctgctcgaaaatacatccactcgctctgcaccagccattacctggac
cttttcatcacgtttatcattggcgtcaatgtcatcacaatgtccatggaacactttgac
caacccaagtctctagaagaagccctgaaatattgcaactacttgttcaccttcgtcttt
gtggtcgaagccatcttgaaactggtggcctttggcttccggaggttcttcaaggacagg
tggaaccagctggatctggccatcgtcctgctgtccatcatggggattactctggaggag
atagaaatgaacgccgcgctccccatcaaccccaccattatccgcatcatgagggtgctc
aggattgctagagtgctgaagctactgaaaatggccacggggatgcgggccttgctggac
acggtggttcaagcccttccccaggtggggaacctcggcctgctatttatgcttcttttt
ttcatctacgctgctctgggggtagaattatttgggaagttagactgcagtgaggagaat
ccttgtgaaggcctaagtcggcatgctaccttcaacaactttggaatggccttcctcacg
ctctttagggtatcaacaggggacaactggaatgggatcatgaaggacactctccgggaa
tgtcacaaggatgacaagcactgcctcagctatctgcctctcatctcccctatttacttc
gtcaccttcgtcctcatcgcccagttcgtcctggtcaacgtggtggtggccgtcctgatg
aagcacttagaggaaagcaacaaggaggcgaaggaagatgctgagatggatgccgaaatt
gagctggagatgtccagaggggtcggcacgccagaaaggaccatggatgggagacagacc
tcttccaaggggggttcacccgtgctggtgaagcataaagccatgggagcttctgctgct
gccgtcggcattcgggagccccagaaccttctgactcttcgcaagatctcagtggcaagg
atgcattcgctgcccaacgacagttacatgttccgtcctgtgatgcccgccaagcttcct
ttcccgctccatgaaggggagctagaagccttctcctacaagtcacctcgagggtccatc
acgtccatccgttctcagccactggtcacttcttcatctctgaggatcccacagttggcc
ttccgccccacaacaccccctcctagccacaacatgggagctccatggaagcttctaccc
cctcaccctgcccctcgcacccccagtttcaacagactgctgtgtagacaggaggccgtc
cggaaagactcgttggatagctcagctgtggagtcaaagcagtgtgtccaggctgagatg
cgtgaaaacccacccctgaaaaagttgtcccacagtattttgggggcccctcagcctccc
ccggcccccacatccctcccaggcagtcctccccttccccacccctccccttctcaccct
tcaagcatccacacccacaaggacaccttcagccagcacaacatctcaaataggaggtcc
acccacggtagcctcctagacacctccctctttgagtcctccgatctggcagacgaagag
gtccgccacatcaacagctctgcacgggattggagggcacagctggagagccaggactgc
tctgactccccttttgcctctccggcgccatcccctgtccccttcaggaactgcagcaca
accagcttgacgatggggaagggcaaggagaaggacctgaagaagttctacagcgtggac
acccgggggttcttggccaagccgctgtgggccgatgaccagcgacggcactccattgag
atctgcccctcggtcgaccacagggctcatggcttcacagacacttctgaaaggaggagg
ctgcctctccaggtccagttggagtccgagtacctgcacggcctccggaggaagaagaaa
atgagccccccctgcatttctattgaccctcccatggaggaagaaagcagcaccaccaca
acacgcaccaaggcctctgagaacagcctgctgaggcggagaacgccctcttgcgaatcc
acagcctacagggacaccttggagctggctgagggtcagcctggagaaccagcctgcaag
gcagaccgctgggcacccccagcctgccgaggggagcacttaaccatcccaagcttctcc
tatgaaccgatggaccccggttccatgggtgagccctgcaaacgcctcttggagagtagc
caagcttcagaccgttctgtggattccaccccggagggtccagagctgcagccaacagac
cctttggagactcacagcaacccctctgagacaaaccaagaagaacttgggggggcgagg
aagtgtcccctcccacagtacggacaggttccagggaccccaaccaccacagaagaggtt
gtggacgagccggtatag
DBGET
integrated database retrieval system
