Crotalus tigris (Tiger rattlesnake): 120319303
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Entry
120319303 CDS
T08476
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ctig01001
]
120319303 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ctig04054
]
120319303 (CIITA)
Enzymes [BR:
ctig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120319303 (CIITA)
Protein kinases [BR:
ctig01001
]
Serine/threonine kinases: Other
TAF1 family
120319303 (CIITA)
Pattern recognition receptors [BR:
ctig04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120319303 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
NB-ARC
AAA_16
LRR_9
AAA_22
SLFN-g3_helicase
AAA_25
Viral_helicase1
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120319303
NCBI-ProteinID:
XP_039223950
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MLRDGIISKEYYQTLLYEKDADDLARKIALTLLGKQAKHSDSTCLSGLQLSGNSRENAKN
GAVSLRTRNLTDDVSPEGIPPETHCLQSETHPALMEEMAEAPAVQASEVTSEDQDNPEVF
YTVERDESGEVVCLCSDMGEAYDKIAALAEYLLKDQQDTPVEEPFDSLFWQVGAAEGPGG
CAEAKIQGPSPDAPEAKRQRLAHPPALCIVSGDPLTIALNPGQDGSDSPPDFHVQILVAT
MGPAGGSPEVFGSSANRELWCIPGHRSNIQMIFAFENAQQPCLPPDTPTSPELARAFCKR
LKDHFGRECHPAPGQPLGHLYLERDLLQHHPDGRSGRSADLRRCHLGEKWEASVERSKLF
QVTRRNDLDSRVIVVLGKAGTGKSLLVQKICLDWANGQMAQFDFVFWFDCRRLSLLHRTY
RDFKSLLSDSLGGSWEGLDEVYESLLQNPERVLLLFDGVGDLRGPGGFPSTSGSLSCRAA
PGLGTILASLFQKKLLNGCTFLLTGRPKERLPQYFPRVDTVLELVGFSMEQASLYVARSL
EGSSHWEQKVNLIKASPFLFGHCCNPGLCRVICQAVFEAGGQELPSTLTGLFVTYLLQRL
ARSTANDTASRYQGIAALAEVSWSLGQRCQKALSSEQFPSAGVKEFALKTGLLVEEGDVY
VFPNFGVQDFLMALHLTLAKEIKGKKLTKYVGLGTKFRKFLSSWGLVPRFLSGLLFLKDG
LGSSLLSGKEGELDTEKMITKKQRSLSRFIRKLSIRDFSPDKLLELLHCVHETEDQYLLN
HLSLELSPDLSFLGFSLTPLDVSALHSLLRRSSKRFSLDLRGSGIHLDGLRKLVDLKNVT
QFRVSLGEAVALWKHLWDSQEREALQAAMGKFLVVPFRAETMADVDSLLGLVQLHREMAE
GREDSAGSSSRLIPAIAGFLQLEFSLGPSCGLEGFQKLVESLVAFSALQHLDLDSPDENE
IGDEGVRSLSRVLPRLASLETLNLSRNKITDLGAQLLAGALPSLRLLKTLSLYENNIGDA
GAERVAEVLPQMRTLRVLDLHCNQISAAGARCLTERLRRCPRIQSLAFLLLKNLSSLWNP
TIPHGVLDHLQQLDSRIRRF
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgctgagggatggaattatatcaaaggaatactatcagacgttactttatgaaaaggac
gctgatgatttagcaaggaagatcgctctgaccttgctcggaaaacaggccaagcattca
gattccacctgtctctctggcttacagctttctggcaattctagagaaaatgctaagaat
ggagctgtctcactgaggactagaaacttgactgatgatgtgagccctgaagggatccca
ccagagacccactgcctgcagagcgaaacccacccggcattgatggaagagatggctgaa
gcacctgcagttcaagcttctgaggtgaccagtgaggatcaagacaaccccgaggtgttt
tacacggtggagagggacgagagcggagaagtcgtctgcctctgctctgatatgggggag
gcctatgacaaaatcgctgccctggctgaatatttgctgaaagaccagcaagacacccca
gtggaggagccttttgacagcctcttttggcaggtgggggctgcggaagggcccgggggc
tgcgcagaggccaaaatccagggcccttccccggacgcgcccgaagccaagcgccagagg
ctggctcacccaccggctctgtgcattgtgagcggggaccccctcaccatcgccctgaac
cccggccaggatggcagcgactctccacctgacttccacgtgcaaattttggtggccacc
atgggccctgccgggggatctccagaagtctttgggtcctctgcaaatcgggagctgtgg
tgcatcccaggccacaggagcaacatccagatgatcttcgcctttgaaaatgcccagcaa
ccctgcttgcccccggacaccccaacttccccagagttggccagggctttctgcaaacgc
ctgaaagaccattttggcagagaatgccacccggcacctgggcagcccctgggacatctt
tatctcgagagggacttgttgcagcatcacccggatggcaggagcgggaggagcgcggat
ctgaggcgctgccacctaggagagaagtgggaggcttccgtggagagaagcaagttgttc
caggtgaccaggagaaatgacctggacagcagagttatcgtggtcttggggaaggcgggc
acggggaaaagtctcctggtccagaagatctgcctggactgggccaatggccagatggcc
cagtttgactttgttttttggttcgactgccggaggctgagcctgctccacaggacctat
cgtgacttcaagtccctgctctcggactccctggggggctcctgggagggcctcgatgaa
gtctatgagagcctgttgcagaacccagagagggtcctcctcctctttgatggcgtggga
gacctgaggggtcccgggggcttcccatctacttcagggagcctgtcctgcagggcagcc
cctggcctgggcaccatcctggcctccctcttccaaaagaagctgctcaacggctgcact
ttcttattgacgggacggcccaaagaacggctcccccagtatttccctcgcgtggacacg
gtcctggagctggtgggcttctccatggagcaggcctctctctacgtcgctcgctctttg
gagggctcttcccactgggagcagaaggtgaacctgatcaaggcctctcctttcctgttc
ggccactgttgcaatcctggcctctgcagggtcatttgccaggctgtgtttgaagcagga
ggtcaagagctgccctccacactcaccggcctcttcgtcacctaccttctccagaggttg
gcacgttccacggcaaacgacacggcctcgagataccagggcatcgctgccttggctgag
gtctcttggtctcttgggcagcgttgccaaaaggccctctcgagcgagcagttcccttcc
gcaggcgtaaaggagtttgctctgaaaaccgggctcctggtggaggagggggatgtgtat
gtgttccccaactttggggtccaggatttcctgatggctctgcatctgactctcgctaaa
gagatcaagggcaaaaaactcaccaaatacgttggtttggggaccaagttcaggaaattt
ctctcttcgtggggcctggtgccccgtttcctgtctgggttactgttcttaaaggatggc
cttggcagttccctcctttctggtaaggaaggtgagttagatacagagaagatgatcacc
aagaagcagagaagtctctcgcgattcatcaggaaactttccattagggatttcagtcca
gataaattgttggagctgctccattgtgtccatgaaacagaagatcaataccttttgaac
catctgagcctggagctcagcccagacctctctttcttgggcttttccctcaccccactt
gatgtcagtgccctgcactctctcttgaggagatcctccaagaggttctccttagacctg
agggggagtggcattcacctggatggactcaggaagctggtcgacctgaagaacgtcacc
cagttcagggtgtccctcggtgaagccgtggcgctctggaagcacctgtgggacagccag
gagagggaagccctgcaggcagccatggggaagttcctggtggtgcccttcagggcggag
acgatggcggacgtggactctctcctgggcctggtgcagctgcacagagaaatggcggaa
ggcagggaagactctgccggttccagcagccgtcttattccagccattgctgggttcctg
cagctagaattcagcctcgggcccagctgcggcttggagggtttccaaaagttggtggag
tctttggttgccttttctgctcttcagcacttggacttggattcccctgatgaaaacgaa
atcggagacgaaggggtgagatccctcagccgtgtccttcctcgcttggcgtctctggaa
acgttgaacttgtcccggaacaaaatcactgacctgggtgcacagctgttggccggagcc
ctgccctccctgcgtttgctgaagaccctcagcttgtacgaaaacaacattggagatgct
ggtgcagagcgcgtggcagaggtgctgccccagatgcgcacgttgcgggtgctggacctg
cactgcaaccagatttctgctgccggagcccggtgtctgacggagcgcttgaggagatgc
ccccgcattcagagcttggctttcttgcttttaaaaaacctttccagcttgtggaaccca
acaattcctcacggagttctggatcacctgcagcagctggattctcggatcagaagattt
tag
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integrated database retrieval system
