Candida tropicalis: CTRG_05772
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Entry
CTRG_05772 CDS
T01115
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ctp
Candida tropicalis
Pathway
ctp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CTRG_05772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctp03021
]
CTRG_05772
Enzymes [BR:
ctp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CTRG_05772
Transcription machinery [BR:
ctp03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CTRG_05772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
8298539
NCBI-ProteinID:
XP_002546294
UniProt:
C5MI79
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MKEVVVDIAPKCIKGLEFGALSAKDIVAQSEVEIQTRDLYDLEKGRTPKEHGALDTRMGI
SSNAQECSTCHGNLASCHGHFGHIRLALPVFHVGYFKSIISVLQCICKNCAAVLLDEPTK
RRFLNDLRRPNIDNLRRMKILKQVIEQCKKQRRCLKCNHVNGVVKKAASGAGPAALKIVH
DTFRWIGKKDTPEKNAWDDDLEKVFQRNPELSKFVKRIHDDLNPLKTLNLFKQITPSDCE
LFGLDPAKGGRPEMYIWRYLPAPPVCIRPSVMMDAQSNEDDLTVKLTEIVWTSSMIKAGI
LKGISINNLMEQWDYMQLSVAMYINSDSANPALSAGGGGAKASKPIRAFCQRLKGKQGRF
RGNLSGKRVDFSGRTVISPDPNLKIDEVAVPDRVAKVLTYPEKCTRYNRKKLQRLVYNGP
DTYPGANYVAKQNEPGKRNLRFGDRAKLAKNLQIGDVVERHIEDGDVVLFNRQPSLHRLS
ILSHYAKVRPWRTFRLNECVCTPYNADFDGDEMNLHVPQTEEARAEAINLMGVKNNLLTP
KSGEPIIAATQDFITGSYLISHKDSFFDRASLSQLLSMMSDANIQFDIPPPAIFKPVMLW
TGKQVFSLLIKPNKQSKVVINLDAKNKTFHPPAKGLPNEMSPNDGFVVIRGSQILSGLMD
KSTLGDGKKHSVFYTILRDYGPQEAANAMNRMAKMCARYLGNRGFSIGINDVTPADELKQ
KKELMVEQAYLKCDQLIDLYNRGKLETQPGCNEEQTLEAKIGGLLSKVREEVGEVCIREL
DSLNAPLIMATCGSKGSTLNVSQMVAVVGQQIISGHRVPDGFQDRSLPHFTKNSKTPQSK
GFVRNSFFSGLTPPEFLFHAISGREGLVDTAVKTAETGYMSRRLMKSLEDLSTQYDNTVR
NSSNGIVQFTYGGDGLDPYDMEGDARPVNFNRQWDHSFNLTYNVDDKGLLPYQISELVDS
KLSPLETGNNAETEFYKSIKEFIAKKSDRLGRLREDRGLKAFVTAGDMEVDEDPAVVNSV
NQILKISQKTIEKFLEQCLYKYSRAKVEPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVAS
MNVTLGVPRIKEIINASKVISTPIINSVLVNDEDEIAARVAKGRIEKTLLEDVAFYIEDV
YKDNLCYLSIKIDLETIDE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagtggttgtcgatatagcccctaaatgtatcaagggtttagagttcggggcc
ttatctgccaaggatattgttgcccaatctgaagtcgagatccagacccgtgatttgtac
gatctagaaaagggtagaacaccaaaggaacatggtgcattggatacaagaatgggtatt
tcatcaaacgcccaagagtgttcaacatgtcatggtaatttagcttcatgtcatggtcat
tttggtcatattaggttggctttgcctgtattccatgtgggatattttaagagtatcatt
tctgtcttgcagtgtatttgtaaaaactgtgctgccgtattattagacgaaccaacaaag
agacgatttttgaatgatttgagaagaccaaacattgataatttgagacgtatgaagatt
ttgaaacaagttattgaacaatgtaaaaagcaaagaagatgtctcaaatgtaaccatgtt
aacggggtagttaagaaagctgccagtggtgctggtccagctgcgttgaagattgtccat
gacactttcagatggattggtaaaaaagacactccagaaaagaatgcttgggatgatgat
ttagagaaagtttttcaaagaaaccccgagttgtccaagtttgttaagaggattcatgat
gatttgaacccgttgaagacattgaatttattcaaacagattactcccctggattgtgaa
ttgtttgggttggatcctgccaaaggaggtagaccagaaatgtatatttggagatatttg
ccagcaccacctgtttgtatcagaccatctgttatgatggatgctcaatccaacgaagat
gatttgactgtgaagttaactgaaattgtctggacctcctctatgatcaaggcggggatt
ttaaagggtatttccatcaacaacttaatggaacaatgggattacatgcaattatctgtt
gccatgtatatcaactccgattctgccaaccctgcattgctggcaggtggtggtggtgct
aaggcctccaaacctatccgtgcattttgtcaaagattaaagggtaaacaaggtcgtttt
agaggtaacttgtctggtaagagagttgatttttccggtagaactgtcatttcccccgat
ccgaacttgaagattgacgaagttgctgttcccgatagagtggcaaaagtgttgacatat
cctgaaaagtgtactcgatacaacagaaagaaattacaacgtttggtgtacaatggtcca
gatacttatcctggtgcaaactatgtcgctaaacaaaacgaaccaggtaagagaaacttg
cgtttcggtgaccgtgctaaacttgcaaagaatttgcaaataggtgatgttgttgaacgt
catattgaagatggtgatgttgttttgttcaatagacagccttcgttgcatagattgtcg
atcttgtcccattatgccaaagttcgtccttggagaaccttccgtttgaacgaatgtgtt
tgtactccatataatgccgattttgatggtgatgaaatgaacttgcatgttccacaaact
gaagaagctagagccgaagcaattaatttgatgggggttaaaaacaatttgttgacacct
aaatctggtgaaccaattattgctgccacacaagatttcatcactggttcctatttgatt
tcgcacaaggactcgttctttgatcgtgcatcgttgctgcagttgttgagtatgatgtct
gatgccaatatccagtttgatattcctccaccggccatctttaagccagtcatgttgtgg
actggtaagcaagttttctctttgttgattaaaccaaacaaacagtccaaagttgttatc
aatcttgatgccaagaacaaaaccttccatccaccagccaaaggtttacctaatgagatg
tctcctaacgatgggtttgttgttattagaggttctcaaatcttgagtgggttgatggac
aagtctacattgggtgatggtaaaaagcattctgttttctatactattcttcgagattat
ggtccacaagaagccgccaatgccatgaacagaatggccaaaatgtgtgccagatatttg
ggtaacagagggttctctattggtatcaatgatgttactcctgctgatgagttgaaacaa
aagaaagaattgatggttgaacaagcatatctcaagtgtgatcaattgattgacttgtat
aaccgtggtaaattggaaacccaaccaggttgtaacgaagaacagactttggaagccaag
attggtggtttgttgtcaaaggttagagaagaagttggggaagtttgtattagagaattg
gactcattgaatgctccgttgatcatggcaacctgtggttctaaaggttctactttgaat
gtgtcacaaatggtggcggttgtcggtcaacaaattatttccggtcatcgtgtcccagat
gggttccaggatagatcgttacctcattttaccaaaaattccaaaactccacaatccaag
gggtttgttagaaactcgttctttagtggattgacaccaccagagttccttttccatgct
atttctggtagagaagggttggttgatactgctgtcaagacagctgaaaccggttacatg
tcaagaagattgatgaagagtttggaagatttgtctacccaatatgataacacagtgcgt
aattcatctaatggtattgttcaattcacctatggtggtgatggtttggatccttatgat
atggaaggtgatgccagaccggtcaatttcaacagacaatgggatcattccttcaacttg
acctataatgttgatgataaaggattgttgccataccaaatcagtgagttggttgactcg
aaattgtctccacttgagacgggtaataatgcggaaactgagttttacaagtctataaaa
gaatttattgccaaaaagtcggacagattaggtagacttagagaggatagaggtttgaag
gcgtttgtaactgctggagatatggaggtggatgaagatccagctgttgttaactcggtt
aatcaaatacttaagatttctcaaaagactattgaaaaattccttgaacagtgtctttac
aagtactcccgtgccaaggtcgaaccaggtacagctgtgggagctattggtgcacaatct
attggtgagccaggtacacaaatgacattaaagactttccattttgctggtgtggcgtcg
atgaatgtcacattgggggttcctcgtattaaagaaattattaatgcttctaaagttatt
tctactcctattattaactctgtgttggtgaatgacgaagatgagattgctgcacgtgtt
gccaaaggacgtatcgagaagactcttttggaagatgttgcattttacatcgaagatgtg
tataaagataacctttgttatttgtcgatcaagattgatttggaaactattgacgaa
DBGET
integrated database retrieval system
