Candida tropicalis: CTRG_06217
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Entry
CTRG_06217 CDS
T01115
Name
(RefSeq) conserved hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ctp
Candida tropicalis
Pathway
ctp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CTRG_06217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctp03019
]
CTRG_06217
Enzymes [BR:
ctp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
CTRG_06217
Messenger RNA biogenesis [BR:
ctp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CTRG_06217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
AAA_35
MTS_N
GST_C
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
8301556
NCBI-ProteinID:
XP_002546739
UniProt:
C5MJH4
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MSIPGFGNIDQVNDEILDISITIPEGNEWRIEIPFNKILKFKVVSGLVEINGTELSNNID
IQLSGCKTFLYSPVSDSTIEYSLIDNKDDLSLVSSSDDGFIEYLSDESNMNSILNLHMYL
ESKRQFVKDYNFSSSIDQQQNGPRVLIIGSKSSGKTSISKTLVSYANKMNNTPILINLQP
RDGVFALPGSLTATPISDFFDIESCNGYGFTTTSGTLSHNPKQPIVKNFGMVDFKDNLEL
YKLMIEKLGITVLSRLEQDLNIKNSGIVIDTPALNSKNFDVIESIVSNFLIDNIVVVGNE
RLAIELTKKFAHKLNQLNIIKLNKSSGCVEVDEKFIRFQQEQTIKEYFNGNFKTRLSPFK
TDIEFQGLKIYKNILTQDLISQMAFLPAGDDFERDENSKEEDEDDKELAKYYKIFDEPNS
SNLDNSIIAITHLSNNDKKIGRDLLNTSVMGYVHVSKFDDDKKRLKILLPFPGAFPKNVL
ISTNIGYSE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataccgggatttggaaatattgatcaagttaatgatgagattttagatataagt
ataaccattcctgaaggaaatgaatggcgtattgaaatcccatttaataaaattcttaaa
ttcaaagttgtttcaggacttgttgaaatcaatggtactgaactttcaaataatatagat
attcaattatctggttgcaaaacattcttatactcaccagtttctgattctactattgaa
tattcattaatcgataataaagatgacttatcattggtgtcttcatctgatgatggattt
attgaatacctaagtgatgaatcaaatatgaattcaattttaaatttacatatgtatctt
gaaagtaaaagacaatttgttaaagattataatttttcaagttcaatagatcaacaacaa
aatggtccaagagtattaataattggttcaaaatcatctggtaaaacatcaatactgaaa
actttagtttcttatgccaataaaatgaataatactccaatattaattaatttacaacct
cgtgatggtgtatttgcattacctggatcattaacagctactccaataagtgattttttt
gatattgaaagttgtaatggttatggttttactactacaagtggtactttatcacataat
ccaaaacaaccgatagtaaaaaattttggaatggttgattttaaagataatttggaattg
tataaattaatgattgagaaattaggtatcactgtattatcaagattagagcaagatttg
aatattaaaaatagtgggattgttattgatacaccagctttaaatctgaagaattttgat
gtaattgaaagtatagtttcaaattttttaattgataatatcgttgttgttggtaatgaa
agattagcaattgaattaactaagaaatttgctcataaattaaatcagttgaatattatt
aaattgaataagctgtcaggttgtgttgaagttgatgaaaaatttatacgtttccaacaa
gaacaaacaattaaagaatattttaatggtaattttaaaaccaggttatcaccttttaaa
acagatatagaattccaaggattgaagatttataagaatattctaactcaagatttaatc
tcgcaaatggctttccttccagctggggatgattttgaaagagatgaaaatagtaaagaa
gaagatgaagatgataaagaattggctaaatattataaaatatttgatgaaccaaatagt
tctaacttggataattcaattattgccattacacatttatcaaataatgataagaaaatt
ggaagagatttattaaacaccagtgttatgggttatgttcatgtaagtaaatttgatgat
gataaaaaacgattgaaaattttattgcctttccctggtgcattccctaaaaatgtatta
atatctacaaatataggatatagcgagtag
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integrated database retrieval system
