Cyprinodon tularosa (White Sands pupfish): 119771743
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Entry
119771743 CDS
T07496
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04020
Calcium signaling pathway
ctul04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119771743
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119771743
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119771743
Ion channels [BR:
ctul04040
]
Ligand-gated channels
Glutamate (ionotropic)
119771743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
119771743
NCBI-ProteinID:
XP_038123793
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MGIPPRRPWPPVFLLILLAASLHARPLLVHSSINVAVVFSGSSYQSEVRGRLSGENFVDL
PVVVSPVTVLVNDTNPRDLLTHLCDTMATEKLHGVVFEDDVGSGSDAQVAEVAQILDFLS
TQTALPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQVICMFKILEEYDWAEFAVITSLL
PGYDTFVEIVQSYTDTSYFLWNLQDIMSLEMSVGANDLKTKRMLQQLDSQVLLAYCSHEE
AQYLFGLAGELGLLGPGYIWILPSLAVGNPNSPPPASFPVGVIGVITDQWRKSLRQRVRE
GVAIVAKGAESFKKVHGFIPEGHGDCSKPAKPSDNTTLFRHMLNVTWERKELSFNNQGFL
SNPSMVIIALDREKLWDKVGTFARGILQVRYPIWPRYGSFLEHISDDRHLTVATLEEHPF
VMVENVDPGTGTCVRNTVPCRRQANHSDSTVHSESYTKLCCKGFCIDILKKLSKTIKFSF
DLYLVTNGKHGKLVHGIWNGMIGEVFYRRADMAIGSLTINEERSEIIDFSVPFVETGISV
MVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVSAKAPG
GPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQ
EQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMMKYNQKGVEE
ALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALEKNSRWKRPI
DLALLQFLGDGDTERLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVF
AWEHLLYWKLRHSLHKSHKLDFLLAISRGIYSCFKGVEDPGRSSGLAKPDLTSNYAQANM
LKMLRTAKDLVSTANVESSLDNATKTIEQLTRHGGSMPVRVPQVTTESVPGGFAYVAENH
CPIPQGSLTPPLTCVTSLKQHRGVTRPTPLRYTLPTRSTSCLYERPLPVSSLSTPHLALG
ESLPHQHPHHYQTTGRVYVDSHCHSPFIAYSDLQLPDIYTSHPLASSQNQHVQMGFSQPK
RRARSFQCDNEDVERRTHGDQGKIDKSTISLTELKANHLQENHISNPSVDNVYSGEGICP
RVENYSSWPPEDLAQRGRRRHRRPSFLKATWGNDQIRQFDESQSSLSSQSPSTLPDLFPY
NVTPTSAKPYNPVHVRNNLCLPRNQAYLHIREDQRRPNGRKGQRLRYSQSTHLPTYGEAV
RNGNGLGRGMVRRATSLLSRQYSHYLNSYPGLPIYHSPLDLQHHSHSSSPVCQLLACGGG
RCGGQRSLLHQDNVYGAYGVYQATQAGSEGQVGQGGAGQPVGSPCVLRPWRRVSSLESEV
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgggcattcctcctcgccgtccttggcctccagttttcctgctcatcctgctcgccgcc
tcgctgcatgctaggcctctgctcgtccactcctccattaacgtggcggtggtgttcagt
ggctccagctaccagagcgaggtcaggggtcggcttagcggggagaacttcgtggacctg
ccggtggtagtcagcccggtgaccgtgctggtcaacgacaccaacccccgggacctgctg
acgcacctgtgtgacaccatggcaaccgagaagctgcatggggtggtgtttgaggatgat
gtgggctcaggctcagatgctcaggtggcagaagtggcacaaatcttggacttcctctcc
acacagacggctctgccaatcgtgggcattagcggcggctctgcagttgttattccatac
aaggctgaggggtcctccttcctacagatgggagcttctctggagcagcaggtcatttgc
atgttcaagatcttggaggaatacgactgggccgagtttgcagtgatcaccagcttgctg
ccgggctacgacaccttcgtggagatagtccagtcgtacacagacacgtcctactttcta
tggaatctgcaggatatcatgtctctggaaatgtctgttggtgccaatgatttgaagacc
aaacggatgctgcagcagttggactcccaggtcctgctggcgtactgctcccatgaggag
gcgcagtacctgtttggtctagcaggcgagttgggtctgctggggcccggctacatctgg
atactccccagccttgctgtaggcaaccccaatagccccccacctgccagcttccctgtg
ggtgtgattggtgtgatcacggaccagtggaggaagagcttgaggcagcgggtgagggag
ggggttgccattgtagctaaaggggcagaaagtttcaagaaggttcatggtttcattcct
gaaggacatggagactgcagtaaaccagcgaaaccatcagataacaccacgctgttcagg
cacatgctgaatgtaacatgggaaagaaaagagctgtcgttcaacaatcaagggtttctt
tccaacccctctatggtcatcatcgcattggaccgggagaaactgtgggacaaggtaggc
acatttgctcgcggcatccttcaggttcgctaccccatctggccgcgctatggcagcttc
ctggagcacatatctgatgaccgccatttgacggtggccaccctggaggagcatcccttc
gtcatggtcgagaacgtggacccaggaactggcacgtgcgtccgcaacactgtgccctgc
aggcgccaggccaatcattcagacagcactgtccactcggagtcctacaccaaactgtgc
tgcaaaggcttctgcatagacatcctgaagaagttgtccaaaaccattaagttctccttt
gacctctatctggtcaccaacggaaaacacggcaaactggtgcacgggatttggaacggg
atgattggggaggtgttttacaggcgcgctgacatggccatcggctccctcaccatcaac
gaggaacgctccgaaatcattgacttctctgtgccatttgtggagacgggcatcagcgtc
atggtagctcgtagcaacggcaccgtatcaccgtctgcctttcttgagccgtacagtcca
gcagtttgggtcatgatgtttgtgatgtgcctgaccgtcgtggctgtgactgtgtttgtc
tttgaatacttcagcccagtgggctacaaccgcagcctggtgagcgccaaagctccaggt
gggccgacgttcacgattgggaaatcagtgtggctgctgtgggggatcgtcttcaacaac
tcggtccccattgaaaaccccaaaggaaccaccagtaaaattatggtcctagtctgggcc
ttctttgctgtcatcttcctggcttcttacacggccaatctagctgctttcatgatacag
gaacaatatatcgacaccgtgtctggcctttccgacaagaagtttcagaaaccgcaggag
cattatcctccttttcgcttcgggacggttccaaacgggagcactgagaggaacatccgc
agcaactatcctgacatgcacacacacatgatgaaatacaaccagaagggagtagaagaa
gctctggagagtctcaaaaccgggaagcttgatgccttcatctacgatgctgctgttttg
aattacatggccggaaaagacgagggctgcaagttggttaccatcggcagtgggaaagtg
tttgccaccacaggatatggcatcgctctggagaaaaactcccgctggaaacggccaatt
gacttggctttgcttcagtttctaggagacggagatacggaacgtctggagacggtctgg
ctttctggaatttgccaaaacgagaaaaacgaagtgatgagcagcaagttggacattgat
aacatggcaggtgtcttctacatgcttctggttgctatgggcctcagcctgctcgtgttt
gcctgggaacatctgctctattggaaactacgccactctctccacaagtctcataaactg
gacttcctgttggctatcagcaggggtatttacagttgttttaaaggagtagaagatcct
gggcgttcatctggattggccaaacctgacctgacctccaactatgctcaagcaaacatg
ctaaagatgcttcgcaccgccaaagacctggtctccaccgctaatgttgagagctccctg
gacaacgctaccaagacaatagagcagttgacccgtcatggaggaagtatgcctgttcgc
gttccacaagtcaccactgagtctgtgccgggaggctttgcttatgttgctgaaaatcac
tgtcccattcctcaagggtcccttactccacctctaacttgcgttacctctctgaaacaa
cacaggggtgtaactaggccaacaccactgcgctacacacttccaactcgttcaacatca
tgtctatatgagagaccgcttcctgtgtcaagcttgagtacgccccatcttgccctaggg
gagtcgctccctcatcagcacccacaccactaccagactacagggagggtctatgtagac
tctcattgtcactcccctttcattgcctactctgatctccagctgcctgacatttacaca
tctcacccacttgcctcatctcaaaaccaacatgtccaaatgggcttctcccaaccgaaa
aggagggccaggagttttcaatgtgacaatgaggatgtagaaagaagaacccatggggat
cagggaaagattgacaaaagtactatcagtctgactgaacttaaagccaatcacctccag
gagaaccatatctctaacccaagcgttgacaatgtttactcaggagaggggatatgtccc
cgggtggagaattacagctcttggcctccagaagaccttgcgcagagagggaggcggaga
caccggcgcccctcatttcttaaagcaacttggggcaatgaccaaattcgtcagtttgac
gaatcgcagtcttctctatccagccaatcaccttcaaccttgcccgacctgtttccttac
aatgttactcctacatctgccaagccttataatcccgtccatgttcgaaacaacctgtgc
ctcccaaggaaccaggcctacctccacataagggaggaccagaggaggccgaatggacgc
aagggccagagactgcgctattcccaatccacccacctccccacatatggagaagcagtg
cggaatggtaatggattagggcggggtatggtgcgcagagcaacaagcttgctcagtcga
cagtactcgcactatctgaactcataccctggcctcccaatctaccacagcccactggat
ctccagcaccacagccatagttccagtccggtgtgtcagttgttggcctgtggtggtggg
cgatgtgggggtcagcgaagcttgctgcatcaagacaatgtgtatggagcttatggggtc
tatcaggcaacccaggctggctcagagggccaggtggggcaaggtggagcaggccaacct
gttgggagtccttgcgtacttcggccttggcgacgtgtttccagtctagaatctgaagtc
tga
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