Cyprinodon tularosa (White Sands pupfish): 119772034
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Entry
119772034 CDS
T07496
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04020
Calcium signaling pathway
ctul04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119772034 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119772034 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119772034 (grin1a)
Ion channels [BR:
ctul04040
]
Ligand-gated channels
Glutamate (ionotropic)
119772034 (grin1a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
119772034
NCBI-ProteinID:
XP_038124225
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVNQANQVYGRDKFKLNAI
SVTHKANAIQMALSVCEDLISSQVYAILVSHPPQSSDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEDDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIALQLINGKNESAHITD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRIEFNDD
GDRKYAHYSILNYQKSRLVPVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMQDGTCKEEITLNGVLIKKVICTGPNETIPGRPIVPQCCYGFCVDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSVETQDDRKSGRAEPDPK
KKPSFRSISTTLASSIKRRRSSKDTQYPPTDATGQLNLSDPSVSTVV
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctactctcgtgctcctgcgcgcgggccggctgcgaa
ccaaagatcgtgaacatcggggccgtcctgagccagaagagatacgagcaggtcttcaag
gatgccgtgaaccaggctaaccaggtctacggccgggacaagttcaaactgaacgccatc
tccgtaacgcacaaggctaacgccatccagatggctctgtcggtgtgcgaggacctcatc
tccagccaggtctacgctatcctggtgagtcaccctcctcagtccagcgaccatctcact
ccaacgcccgtctcctacaccgctggtttctaccgtatcccagttgtggggctcaccact
cgcatgtccatctattctgacaagagtattcacctatccttcctgcggacagtccctcca
tactcccaccaagcacacgtttggttcgatttgatgcgcgagttcaactggaaccacatc
atcctgatcgtcagcgacgaccacgagggccgggctgctcaaaagaggctcgagactctc
ttggaggagagagaaacgaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctacaattcagtcaggagacaaac
ttaaccgccctgctgctggaggctaaagagctggaggcccgagtcatcatcctgtccgcc
agcgaggacgatgctgctgctgtgtacaaggccgcccgcttcctcaacatgacgggctcg
ggctacgtttggctggtaggggagcgggagatgtccggtaaagctctgagcgaggcacca
gacggtctgatcgccctccagctcatcaatgggaagaacgaatcggcccacatcactgat
gccgtggcagtggtggctcagtccatccaggagctgtttgagaaggagaacatcactgaa
cctccgagaggttgtgttggcaacactaacatctggaaaacagggcccctctttaaaaga
gtgctgatgtcctccaaatatccagaaggcctgacggggcgcatcgagttcaatgatgat
ggagacagaaaatacgcccactacagtattctcaactatcagaagtctcgccttgttcca
gtcggcatttacaacggcacacaggtggtgatgaacaatcagcgaaaaatcatttggccc
ggaggagagacagagaaaccgcagggcttccagatgtccactcgattaaagatagtaacg
atccatcaggaaccatttgtgtatgtaaaaccgactatgcaagacgggacgtgcaaagag
gaaattacgctaaatggcgtgttaataaaaaaggttatctgtactgggccaaatgaaacc
attccagggcggcccatcgtcccgcagtgctgttatgggttctgtgttgatctcctgatc
aagttggctatgaccatgaacttcacctatgaggtgcatctggtggctgatggaaaattt
ggaacccaagagcgggtgaacaacagtaacaagaaggagtggaatggcatgatgggagag
ctcctaggtggcctggcagacatgattgttgccccgttgaccattaacaacgaacgtgcc
caatacatagagttctctaaacctttcaaatatcagggacttactattcttgtcaaaaag
gaaattcctcgaagtacacttgactcatttatgcagccgttccaaagcacgctgtggctg
ctggtgggtctttcggtgcatgtggtggcggtgatgctttaccttctagaccggttcagt
ccatttggaagatttaaagtaaacagtgaagaagaggaagaagatgccctcaccttgtca
tctgccatgtggttctcctggggggtgttgctgaactctggaataggagaaggtgcacca
cgcagcttttcagcgagaatcctcggcatggtgtgggctggctttgctatgatcattgtg
gcttcttacactgccaatctggctgctttcctggtgttggaccggcctgaggagcgcatc
actggcatcaatgacccgaggctaagaaacccatctgacaagttcatctatgccacggtg
aagcaaagttcagtggacatctacttccgacgacaggtggagcttagcactatgtaccgc
cacatggagaaacacaactatgagagtgctgcagaggctatccaggctgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttcacatgagaatggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcacggagcaatgcc
ccagccacactcacctttgagaatatggcaggagtcttcatgcttgttgctggaggcatt
gcggcagggatcttcctcatcttcatcgaaatcgcctacaaacggcataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaatgtatggaggaagaacctgcagccc
tcttcctctgtagagactcaggatgataggaaaagtggtagagcagagcccgaccccaaa
aagaaaccctcttttaggtccatcagtaccaccctggcttccagcatcaagagacgtagg
tcctccaaagacacgcagtacccacccactgacgccactgggcagctcaacttgtctgac
ccatcagtcagcactgtggtgtaa
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