Cyprinodon tularosa (White Sands pupfish): 119777101
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Entry
119777101 CDS
T07496
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctul03016
]
119777101 (cdkal1)
Enzymes [BR:
ctul01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
119777101 (cdkal1)
Transfer RNA biogenesis [BR:
ctul03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
119777101 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
Motif
Other DBs
NCBI-GeneID:
119777101
NCBI-ProteinID:
XP_038131823
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MPSACDSLIEDIEDMVSLNDPTPHDRQSARKSIIPRSRKKKELLSSEELQADSFIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPADADLWLLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMEYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVQEIPDGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFRRVVDFLKDRVPGVTIATDIICG
FPGETDEDFQDTLDLVKHYQFPSLFINQFYPRPGTPAAKMDQVPAHVKKQRTKKLSELFH
SYNPYDHKVGERQFVLVTEESFDTQFFVSHNKFYEQVLVPKRAEFKGKMIEVDIYEAGKH
FMKGRPVEDSKPFTPSIAAPLRKGEVSGLMQVHKVNGVKGATSGTPDSALHVGSYNLDRE
LLKKLGMGFALAAAILAFIVEKLF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgcctgtgactctctgattgaagacattgaggacatggtgtctcttaatgac
cccactcctcatgacagacagtctgcaaggaagagtattataccaaggtccagaaagaag
aaggagcttctgagctccgaagagcttcaagcagacagttttatccctggtacccagaag
atctggatgaaaacgtggggctgcagtcataacaactcagatggagagtacatggccgga
cagctggctgccagcggatataagatgaccgatgacccggccgatgcagacctgtggttg
ctcaacagctgcaccgtgaaaaaccctgcagaggaccacttcagaaactccatcaagaaa
gctcaggagcagcagaagaaagtggtcgttgcaggttgtgtaccccaagcccagccacgg
atggaatacctgaaaggcctcagcattataggggtccaacagattgatcgagtggtggaa
gtggtggacgaggctgttaaaggtcactctgttcgcctgttgggccagaagaaagacgga
ggaaaaagacttggaggtgcaaggttggacctgccaaagatcagaaagaaccctctgatt
gaaataatctccattaacactgggtgtctgaatgcatgtacttactgcaagacgaaacat
gctcgaggagacttggccagttatcccatagaggaactggtggaaagagccaggcagtcc
tttcaggagggagtatgtgagatctggttgacgagtgaagacacaggtgcttacggcaga
gacatagggacagatctgcctacattactgtggaggctggtgcaggagattcctgatgga
gccatgctgaggctgggcatgaccaacccaccttatatcctggaacatctggaggagatg
gcgaagattttgaatcatccgcgtgtttatgccttcctccatgttcccgtgcagtcagcc
tcagacagtgtcctgatggacatgaagagagaatactgcattgatgacttcagaagagtt
gttgacttcctcaaagacagagtacctggggtaacgattgcgacggatataatctgtgga
tttcccggtgagactgatgaggacttccaggacaccttggatcttgtgaaacactaccag
tttcccagtctgttcattaaccagttctaccccagacccggtacacctgctgctaagatg
gaccaagtcccagcacatgtgaagaagcaaaggactaaaaagctttctgaactcttccac
tcttacaacccctacgaccacaaggttggagaaaggcaatttgtgctggtgacggaggaa
tcttttgatacccagttctttgtttcccacaacaagttctacgaacaggtgctggtgcct
aaaagggctgaattcaaagggaagatgatagaagtagacatctacgaggcaggaaaacac
tttatgaaggggaggccagtggaagacagcaaaccattcactccctccattgctgcacct
cttcggaaaggagaagtatctggtttgatgcaggtacataaagtcaatggagtcaaagga
gcaacttcaggaacacccgactctgcgctccatgtcggctcctacaatctggacagagaa
ctgctgaagaaactggggatgggctttgcactagcagccgccatcttggcctttattgta
gagaagctgttttga
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