Cyprinodon tularosa (White Sands pupfish): 119777370
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Entry
119777370 CDS
T07496
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03410
Base excision repair
ctul04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119777370 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119777370 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctul03032
]
119777370 (parp4)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119777370 (parp4)
03400 DNA repair and recombination proteins [BR:
ctul03400
]
119777370 (parp4)
Enzymes [BR:
ctul01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
119777370 (parp4)
DNA replication proteins [BR:
ctul03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119777370 (parp4)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
119777370 (parp4)
DNA repair and recombination proteins [BR:
ctul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119777370 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
VWA_2
BRCT_2
BRCT
VWA_CoxE
IES5
Motif
Other DBs
NCBI-GeneID:
119777370
NCBI-ProteinID:
XP_038132148
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MGVFDNCFVLLELKNVPLKEKKKLKSAVTMNGGSFSFIVNKQCSLVVTTDVSNLSSNRLR
SIQKHQTPVVGLNYLHDCVERGALLPVDGYQMDTASAASSPAPPPVQLASRAPLAAEAAQ
QTKERKDEKLRIFHESDSDLPAFPDDFQVALYSFFGQDNGSTWCVLELQSAADEEGRRYR
VARYWQDDVAAKKAAVMDRLVFPSTSDKAVDVYQQLTEELQHSDLQLKGDVPAEVQPLGS
APLQQLLLENKLNSSTLSPEVALFVEMLWTEALGCLGNILRVPISQLSLNDVSRAEGLLL
QAQRKLKEGNPSEASSLLEEVYTLLPHKDARPPFPTAKLLSQKLDLCQLIRDFLNVTEMT
CSTPSSVGKYRSLRCSIEAVPPSSAEFQNISALLADRPAEIQQILRVSRGVELQTFRSEL
RNIKPLLHSSSPRNFVGILSRGLLLPHVGVELHGIERTDVGNLGSGIYFSDALSTSLKYS
SPSETDGSRLLLVCDVALGWFKNVYKKDPTLTRPPEGFHSVHGVRRTKGTPSDFEDDEFV
VYSPDQVKIKYVVQFRVKGDQQKPFSPDINLTADAGVPRQMFPSSNYEDLEKIKNPLEDV
TAGLLNSSGEQLPLQAVNVKCKLIDLLSQVVIFQKYTNHSSAPIEAKYVFPLDDLAAVCG
FEAFINGKHVVGQVKEKQTARREYKQAIAKGHGAYLMDQEAPDVFTISVGNLPPGATVLI
KVTFLSELVVRDGSILFSLPGSVAPWQESSALNQTTQVSVQKVCVTDEASREFTLDMSVE
MPNEISSLTCITHQVKIKRTQCQAVVSVMPGQLMGPDGFQLSVSLSEVHLPRMWVEKHPD
KDSQACMLVFYPDFQVDYSSGVSEVVILLDSSESMRDKSFHLAKEIALQVLKNLKDNVRI
NIFLFGTVYQRAFQKAEQLPEADDKAEMFIKSSCPLGGGTELWRPLQALSLLPPSSGVRN
LLLLSDGHIQNAAVTLQLLRDNVKHSRLFTCGLSSTANRHMLRALAQAGGGAYEFFDAKT
KHTWAEKVKHQVKRMLSPGCSSVSVKWQQFNSRAPPPLQSPKQLHALFNDCHTLVYGFVP
HCTQATLLGDVRGQELRTMVSTTELQKTRGTFLHKLTARALIRDYEDGSLDATEAEHEGK
KAELKSFIIDLSKEYSILSQFTSFVAIEERDSEKAEDGVTDVPKLIADEDVDFLPYISWT
LPQEKQTAEIDSIEEDEVELEGAELSDDESVDDMGFGLFDDDPAETTTMKKKSARSQHTR
RNLVAQLKTIYGAPHTCALRRLPPRDINAESVTAIHADLQPPAESSSDVRPAAPTRSSSS
AGFSPDIVYGGVQGPGPVTFRSRRVVPFGATDAAPPLCGAASPSPSTSQNRVTAIYGRFP
MTAGMFAAPPPPPPASIQSRAETFRAPPPCSITVRKHMGLIDQSAGFQSSFGLSGTASPF
LSASQNRATAIYEKLQIQAGMSAAAPPPPASIRPLETDRMSEASLPPKHGRRSPMLGAPL
RRRMESRMFEAPPPSALHIMDPHSGVAEEPMQVDPSPLESREPDPEELRLKWTKIFQLQN
PDGYWELTAELGGLIDLNVDVFANVFLKNRGIHSLGVKAHANILKLVATLLVLQLMRVEK
LEEGKLLQSLFCLKEPSESRPERWQQVKKAVDWVCWADREYPCICSRLEFGWSWESSTRQ
LLGFDRFPPFSPLSSLNLQRTSALLQVH
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgtttgacaactgcttcgtccttctggagctgaaaaatgttccgcttaaggag
aagaagaagctgaagtcagccgtgacgatgaacggaggcagcttttcgttcatcgtcaat
aaacagtgctctctggtggtgaccacggatgtgtccaacctgagctccaacaggctgcgc
agcatccagaagcaccagacgccggtggtcggcttgaattacctgcacgactgcgtggag
agaggagctcttctgcccgtggatggataccagatggacactgcatctgctgcttcatct
ccagctcctccacctgtgcagttagcgagcagagctccgctagctgctgaagcagcacaa
caaaccaaggaaagaaaggatgagaagctcagaattttccatgaatcggactctgatctc
ccggcgttccctgatgatttccaggtggcgctgtactcgtttttcggacaggataacggg
agcacgtggtgcgtgttggagctgcagagcgccgcggacgaggaggggcggcgctaccgt
gtggccagatactggcaggacgatgtggcggcaaaaaaggcggctgtgatggaccggctg
gtgtttccctccacctcagataaagccgtggacgtttaccaacagctgactgaagaacta
cagcactccgacctgcagttgaagggcgacgtccctgctgaggtgcagccgcttggctcc
gcccccctgcagcagctgctgctggagaacaagctgaactcgagcaccttgtcccctgag
gtggcgttgttcgtagagatgctgtggaccgaagctcttggttgccttggaaacatcctc
agagttcccatctctcagctcagcctgaacgatgtgagcagagccgagggcctgctgctt
caggctcagaggaaactgaaggagggaaatccgtctgaggcgtcgtctctcctggaggag
gtttacaccctgctccctcacaaagatgccagaccaccgtttcccaccgcaaagcttctg
tctcagaagctagacctctgtcagttaatccgagattttctaaacgtgacggagatgacc
tgctccacgccatcctccgtggggaagtaccgctcccttcgctgcagcatcgaggctgtt
ccccccagcagcgctgagttccagaacatctccgccctgctggccgacaggcctgctgag
atccagcagatcctccgtgtcagcagaggggtggagcttcagacgttcaggagtgagctc
aggaacatcaagcccctcctccattcgtccagccccaggaactttgtaggcatcttgtcc
agaggtctgctgcttcctcatgtgggagtggagctccatggcatcgagaggacggatgtg
gggaaccttggcagcgggatttacttcagtgatgctctgagcaccagtctgaagtactcc
tcccccagtgaaaccgacggctcccgcctgctgctggtttgtgatgtggctctgggatgg
tttaagaacgtctataagaaagacccgactctaaccaggcctccagagggctttcacagc
gtccatggagtccgccgcactaaaggaactccgtctgacttcgaggacgacgagttcgtg
gtttactccccggatcaggtgaagattaaatatgtggttcagttcagagtgaaaggcgac
caacagaagcccttcagtccggacatcaacctgacggcggacgcaggcgttcccagacaa
atgttcccttcatcaaactatgaagatctggaaaagataaaaaaccctctggaggacgta
acggccggactgttgaacagctcaggagagcagctccccctgcaggccgtcaatgtgaag
tgcaaactgatagacctgctctctcaggtcgtcatcttccagaagtacaccaatcacagc
tccgcccccattgaggcgaagtacgtcttcccattggacgacttggctgctgtttgcggg
tttgaagcttttatcaatgggaaacacgtggtgggacaggtgaaggagaagcagacggct
cgtagggagtacaagcaggctatagccaaaggccacggagcgtacctcatggaccaggaa
gctcctgacgtgttcaccatcagcgtgggcaacctgccgcctggagccaccgtcctcatc
aaagtcacctttctgtctgagctggtggtccgagacgggagcattctgttctccctgccg
gggagtgtggctccctggcaggagagctccgccctcaaccagacaacacaggtttccgtg
cagaaggtttgtgtcactgatgaagcgtcaagagagttcaccttggacatgtcggtggag
atgcccaacgagatctctagtctgacctgcatcacccaccaagtcaaaatcaagaggact
cagtgtcaggcagtggtcagtgtgatgccaggtcagctcatgggtccggatggtttccag
ctctcggtttctctctctgaggttcatcttcccagaatgtgggtggagaaacatcctgac
aaagacagccaggcctgcatgctggttttctacccagactttcaggttgactacagttct
ggagtcagtgaagtagtcattttgctggattcatctgagtccatgagggacaagtctttc
catttggccaaggaaatcgccctgcaggtgttaaagaatctgaaggacaacgtcagaatc
aacatttttttgtttggaacagtttaccagcgagctttccaaaaggctgagcaacttcct
gaagctgatgataaagccgagatgttcatcaagagctcttgtccactagggggcggcacc
gagctgtggcggcctctccaggccctcagcctgttgccgccgtcctctggcgtgcgtaac
ctgctgctgctgtcggacggccacattcagaacgctgcagtcaccttgcagctgctcaga
gacaacgtcaagcacagccgcctcttcacctgcggcctgagctccacagccaatcgccac
atgttgagagccctggctcaagcagggggcggggcttatgaatttttcgacgctaaaact
aagcacacctgggctgagaaggtgaagcaccaggtgaagcgcatgttgtctcccggctgc
agctccgtctctgtgaagtggcagcagttcaactcaagagctcctcctcctcttcaatcc
ccgaagcagctgcacgctctgttcaacgactgccacacgctggtttacggcttcgtgccc
cactgtactcaggcgactctacttggagatgtacgtggtcaggagcttagaaccatggtc
tcaacaacagagctgcagaagaccagaggaacctttcttcataagctcactgccagagcg
ctgatcagagactatgaggacggaagcctggacgccaccgaggctgaacatgagggtaaa
aaagccgagctgaagtccttcattatcgatctaagcaaagagtactccattctgtctcag
ttcaccagctttgtcgccattgaagagcgggattcggagaaagcagaggatggcgtcacg
gacgtccccaagctgatcgcagacgaggatgtagacttcttgccctacatcagctggact
cttcctcaggagaaacaaacagctgagatagattctattgaggaggatgaagtggagctg
gagggggcggagctatctgatgatgaatctgttgatgacatgggctttggcctctttgat
gatgaccctgcagaaactactaccatgaagaagaaatcggctcgctctcaacataccaga
agaaatctggttgctcaattaaagactatttatggtgccccccatacgtgtgctctccgt
cgtttaccgccgcgggacataaatgctgaaagcgtcacagcaattcatgctgatttgcag
ccaccagctgaatcctcttcagatgtcagacctgctgcacccactcgttccagttcttct
gctggatttagtccagacatagtttatggtggtgttcaaggtcctggacccgtgactttt
cgttctcgccgagtagtgccatttggagcaacagatgctgctcctcctctgtgtggagct
gcttcaccttctccttctaccagtcaaaatagagtgacagctatctatggcaggttccca
atgacagctggaatgtttgcagctcctcctcctcctcctcctgccagtatccaaagcaga
gctgaaacattcagagctcctcctccttgctctatcacagtccgaaaacatatgggtcta
atagatcaatctgccgggttccaaagcagttttggtctgagtggaactgcttcacctttt
ctttctgccagtcaaaatagagcgacagctatctatgaaaagctccaaatccaagctgga
atgtctgcagctgctcctcctcctcctgcttctattagacccttagagacagatcgaatg
tcagaagcttctcttccccctaaacacggaaggaggagtccaatgttaggagctcctctt
agacgcagaatggaaagtcgaatgtttgaggctcctcctccttctgcacttcatatcatg
gacccacattctggtgttgcagaggaaccgatgcaagtcgacccgtcacctttagagtcc
agagagccggatccagaagaactgagactgaagtggaccaagatcttccagctgcagaac
ccagacggatactgggagctgactgctgagctgggaggactgatcgatctcaacgtggat
gtgtttgctaacgtgttcctgaagaaccgaggcatccattctctgggtgtgaaggcccac
gctaacatcctgaagctggtggcgactctgctggttctgcagctgatgagggtggagaag
ctggaggaaggcaaactgctgcagagtctgttttgcctgaaggagccgtcagagtccagg
ccggagcgctggcagcaggtgaagaaggcggtggactgggtttgctgggccgaccgggag
tatccgtgcatctgcagccggctggagttcggttggagctgggagtcgagcacccggcag
ctgctgggcttcgatcgcttcccccccttctcacctctcagcagtctgaacctgcagaga
acctcagctctgctgcaggtccactga
DBGET
integrated database retrieval system
