Cyprinodon tularosa (White Sands pupfish): 119777615
Help
Entry
119777615 CDS
T07496
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1-like isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul04020
Calcium signaling pathway
ctul04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
119777615
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119777615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119777615
Ion channels [BR:
ctul04040
]
Ligand-gated channels
Glutamate (ionotropic)
119777615
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Cas_APE2256
Motif
Other DBs
NCBI-GeneID:
119777615
NCBI-ProteinID:
XP_038132495
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MELRGVLLLAVLHCCSVALCGCEPRLVNVGAVLSQKRYEQVFKEAVSQANALYGKDKFKM
NAISVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQPNDHLTPTPVSYTAGFYRIPVVG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKKL
ETLLEERETKTKNRNYENLDQQNFDFRRTPKAEKVLLFTQDTNLTALLLEAKDLEARVII
LSASEDEAAAVYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAH
ITDAVAVVAQSLQELFEKENITEPPRGCVGNTNIWRTGPLFKRVLMSSKYPDGLTGRIEF
NDDGDRRFATYSILNHQKAGRVVQVGVFNGTQVVMNPQRKIIWPGGETEKPVGYQMSTRL
KIVTIHQEPFVYVKPTKSDGTCKEEYTVNGVLIKKVICTGPNGTIPGQPTVPQCCYGFCI
DLLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPEPQTSFRS
ITSTSDLKRRLAPGDPTPYPTDITGQLNLSDPSVSTVV
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgcggcgtgctgctgctggctgtgctgcactgctgctcagtggcgctgtgc
ggctgcgagccccgcctggtcaacgtgggtgctgtcctgagtcagaaacgctatgagcag
gtgttcaaggaggcggtgagtcaggccaacgctctgtacgggaaggacaagttcaagatg
aacgccatctctgtgacgcacaagcccaacgccatccagatggcgctgtccgtctgcgag
gacctcatctccaaccaggtttatgccatcctggtaagccatcctccacagcccaatgat
cacttgacccccactccggtgtcctacacggccgggttctaccgtatcccagtggtcggc
ctgacgacgcgcatgtccatctactctgacaagagcatccacctgtctttcctgaggaca
gtgcccccatactcccaccaggcacaggtctggttcgacctgatgagagagttcagatgg
aaccacatcatcctgatcgtcagcgacgaccatgagggccgagccgcccagaagaagctt
gagacgctgttggaggagcgtgagaccaagactaaaaacaggaactatgaaaacctcgac
caacagaactttgacttcaggagaactcccaaggctgagaaggtgctgctgttcacccag
gataccaacctgactgcgttgctgctggaggctaaagacctggaggctcgagtcattatc
ctgtcagccagcgaggatgaagctgctgctgtgtacaaagcggcccggcagcttaatatg
accggttctggctacgtctggctggtgggagagcgggagatgagcgggaaagctttaagc
gaagctcctgatggcttgctgggtcttcagctgatcaacgggaagaacgagtcggctcac
atcacggacgccgtggccgtggttgctcagtctctgcaggagctgtttgagaaggagaac
atcacagagcctcctcgaggctgcgtggggaacaccaacatctggagaaccgggccgctc
ttcaaacgggtgctgatgtcatcaaagtacccagacggcctcacaggacggattgagttt
aacgacgacggcgaccgccgctttgccacctacagcatcctgaaccaccagaaagcaggt
cgagtcgtccaggttggagtcttcaacggcacgcaggtggtgatgaaccctcagaggaag
atcatctggcctggaggagagacggagaaacctgttggataccagatgtccaccaggctg
aagattgtgaccattcaccaggagccatttgtttacgtgaagccaacgaagagcgatggg
acgtgtaaagaagagtacacggtgaacggagttctgatcaagaaggtgatctgcaccgga
cccaacgggaccatcccaggtcagcccactgtccctcagtgctgctacggtttctgcatc
gacctgctcatcaagctggccatgagcatgaacttcacctacgaggttcacctggtggct
gatggaaagtttggcacacaggagcgagtgaacaacagcaacaagaaggagtggaacggg
atgatgggggagctgctgggcggcctagctgacatgatcgtggctcccctcaccatcaac
aacgagcgtgctcagtacatcgaattctccaaacccttcaagtaccaggggctcaccatc
ctcgtcaagaaggaaatccctcgcagcactctggactcgttcatgcagccgttccagagc
acactgtggctgttagtcggtctgtcggtccatgtggtggcagtgatgctttacctattg
gaccggttcagcccgtttggaaggttcaaagttaacagtgaagaagaagaagaagacgcc
ctcaccctttcctccgccatgtggttctcgtggggagttctgctgaactctgggatcgga
gaaggagctcccaggagcttctccgcccggatcctggggatggtgtgggccggattcgcc
atgatcatcgtagcatcatacaccgccaacctggcagccttccttgtgctggaccggcct
gaggagcgcatcactggcatcaatgaccccaggctgcgtaacccatcagataagttcatc
tacgccacagtgaagcagagctcggtggatatctacttcagacggcaggtggagctgagc
accatgtaccggcacatggagaaacacaactacgagagtgccgctgaggccatccaggcc
gtccgagacaacaagctgcacgccttcatctgggacagcgccgtgctggagttcgaggcg
tcacaaaagtgcgacctggtgacgacgggggagcttttcttccgctctggttttgggatc
ggcatgaggaaagacagtccttggaagcagaacgtgtctttggccatcctcagctctcat
gagaacggcttcatggaagacctggataagacctgggtccgataccaggagtgtgactcc
aggagcaacgcgcctgccaccctaaccttcgagaacatggcaggtgtgttcatgctggtc
gctggcggcatcgtggcagggatcttcctcatcttcatcgagatcgcctacaagcgtcat
aaagacgcccgcaggaagcagatgcagctggccttcgctgccgtcaatgtgtggaggaag
aacctgcaggataggaaaagtggtagagcagagcccgagccccaaacctcttttaggtcc
atcacttcgacctccgacctcaaacgccgtttggcccccggggaccccacgccgtacccg
acggacatcaccggccagctcaacctatcggatccatccgtcagcaccgtggtctga
DBGET
integrated database retrieval system
