Cyprinodon tularosa (White Sands pupfish): 119782917
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Entry
119782917 CDS
T07496
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119782917 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctul03021
]
119782917 (polr1b)
Enzymes [BR:
ctul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119782917 (polr1b)
Transcription machinery [BR:
ctul03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
119782917 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Birna_RdRp_palm
Motif
Other DBs
NCBI-GeneID:
119782917
NCBI-ProteinID:
XP_038140054
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MEFTDKWTNLPPGPSLKNLTDGGFGKLKDKQHAAVQDLTKAHIESFNQAVTEGLTRVVQA
IPPLEFMFKQDRVTLTFVEATIHNPVVTKGSVCTEMKVFPAECRGRRCSYKGKLVADVSW
AINGIPKGIVKQSLGQVPIMVKSQLCNLHGLSPKELVKHHEEAEEMGGYFIMNGIEKVIR
MLIMPRRNYPIAMSRPKWKSRGQGYTQYGISMRCVREEHSAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVDFTDFQIYQELIKGREDNSFYKTCVSEMLRMVSEEGCTTRSKV
LDYLGERFRVKLNLPEWYTNEQCANFLLNECICIHLKSDIEKFYLLCLMTRKLFTYAKQE
CMEENPDSLMCQEVLTPGQLYLMFLKEKLTAWLVSVKLGFDKRGSKLGNGWSTENVMKML
NMGSDLTKPFEYLLATGNLHSKTGLGMLQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAR
MRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEIVAATSYTTSLPALLCSLGVT
PVDGSPGRAFSDCYPVVLDGAVVGWVEAELAQAVVDSLRRFKVLGQKKVPPWTEIVLVPK
TGKASLYPGLFLFSTPCRMMRPVQNLALGKQELIGTFEQLYINVGILEGEIEAGVTTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSYMDRSDNKLYRLQTPQSA
LVRPYMYDHYSLDNYPSGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LGEKVRGDDSIVFGTKPGDPKVNEKLDADGLPHIGSVLQYGDPYYCYISLNTGQSFVTFY
KNQEACVVDNIKICSNDTGSGRFKRVCITVRVPRNPTIGDKFASRHGQKGILSRLWPAED
MPFTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLSHDATPFTFSEENSALDY
FGELLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPVGGRNIQGGIRFGEMERDALLAHGSSFLLQDRLFNCSDRSVAQVCVDCGSLISPLL
EKPPPSWSAMRHRETVCTLCGKSDSIDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagtttactgataagtggacgaatttacctccaggaccgagtctgaaaaacctgacg
gacggagggttcgggaaactgaaggacaaacagcatgctgcggtccaggacttgaccaaa
gctcacatcgagtcgtttaaccaggctgttactgagggactcacacgggtggttcaggcc
atcccacccttggagttcatgttcaaacaggacagggtgaccctaacatttgtggaagcc
accattcacaacccggtggtcaccaaggggagcgtctgcacagagatgaaggtgtttcct
gcagagtgtcggggaagaaggtgttcctataaagggaagctggtggccgacgtcagttgg
gcgattaacggaattcctaaaggtatcgtgaagcagtcgctgggccaggttccaatcatg
gtgaagtcacagctatgcaacctccatggcctgtcccctaaagagctcgtaaagcatcac
gaagaagcggaggaaatgggaggttatttcatcatgaacgggatcgagaaggtgatccgt
atgctgatcatgccgaggaggaactatcccattgccatgtcaagaccaaagtggaagagc
agaggacagggatacacccagtatggtatttctatgcgctgcgttagggaggagcactcg
gccatcaatatgaaccttcattatctggaaaacggcacagtgatgctgaacttcatctac
cagaaggagctcttcttcctccctttaggctttgctttgaaggcgctggtagacttcaca
gatttccagatctaccaggagctgatcaaagggcgtgaggacaactccttctataaaacc
tgcgtgtcagaaatgctgcgcatggtgtcagaggagggctgcaccacccgcagcaaggtg
ctcgactacctgggagagcgctttagggtaaagctgaacctaccggagtggtacaccaac
gaacagtgcgccaactttctcttaaacgaatgcatctgcatccacctgaagtctgacata
gaaaagttctacctgctttgtctcatgacccggaagcttttcacgtatgccaaacaggag
tgcatggaggagaatccggacagcttgatgtgccaggaggttctcactcctggtcagctc
tacctcatgtttctaaaggaaaaactgacggcgtggctggtgtccgtaaagctgggcttc
gacaaacgagggtctaaactgggcaatggatggagcactgagaacgtgatgaagatgtta
aacatgggatcagatctgaccaaaccttttgaatatctactggccactgggaacctccac
tccaagacaggtctcggcatgctgcagaacacgggcctctgtgtggtcgctgacaaactc
aacttcatccgctacctgtcccacttccgctgcgtccacagaggagcggcgttcgccagg
atgagaaccacgtctgtcaggaagctgctgccggagtcctggggtttcctctgtcccgtc
cacactccggacggagagccctgtggactgatgaatcacatgactgccagctgtgagatc
gtcgctgccacctcgtacactacatccctgccggctctgctgtgctccctcggtgtgacg
ccggtggacgggtctcccggtcgagccttttcagactgctaccccgtggttctggacgga
gctgttgtgggctgggtggaagccgagttagctcaggccgtcgtcgactcgctgcgcagg
tttaaggtgctgggtcagaagaaggtccccccctggactgagattgtcctggttcctaag
acgggaaaggccagcttatatccaggcctgtttctcttctcgacgccgtgtcgtatgatg
cgacctgtgcagaatttagctcttgggaagcaagagctgatcgggacctttgaacagctc
tacatcaatgtggggatcctggagggggagatagaggcaggtgttactacgcaccaggag
ctgtttcctcacagcatgctcagtgtggtggccaacttcatcccttactcagaccacaac
cagagtcccaggaacatgtaccagtgtcagatgggtaagcagactatgggtttcccgctg
cactcctacatggatcgctccgataacaaactttaccggctgcagactccacagagcgct
ctggtcaggccctacatgtacgaccattacagcctggacaactaccccagcggcaccaac
gccatcgtggccgtcatatcctacacgggctacgacatggaagacgccatgatcgtcaac
aagtcgtcctgggagaggggctttgctcacgggagcatctacaagacggagttggtggac
ctgggggagaaggtgaggggagacgacagcatcgtgttcgggaccaagccaggcgacccg
aaggtgaatgagaagctggatgctgatgggctgcctcacatcggatctgtgcttcagtac
ggagacccctactactgctacatcagcctgaacacaggccaaagcttcgtcaccttctac
aagaaccaagaggcttgtgtggtcgacaacatcaagatctgcagcaacgacacgggctca
ggtcgttttaaacgcgtctgcatcaccgtacgagtgccgcgaaaccccaccatcggcgac
aagtttgccagccgccacggccagaagggcatcctgagccgtctgtggccggcggaggac
atgcccttcacagagagcggcatgaccccggacatcctgttcaacccgcacggcttcccc
tcccgcatgaccatcgggatgctgatcgagagcatggccggaaagtccgccgccctgcac
ggcctgagccacgacgccacgcccttcaccttctccgaggagaactctgcgctggattac
ttcggggagttgctccgagcgggcggctacaattactacggcacggagaggctctacagc
ggactgagcggccaggagctggaggcggacatcttcatcggcgtcgtctactatcagcgg
ctgcgtcacatggtctcggacaaattccaggtgaggaccacgggagcgcgggataaggtg
accaaccagccggtcggaggaaggaacatccagggaggcattcgtttcggggagatggag
cgagacgccctgctggcccacggctcctccttcctgctccaggaccgcctgtttaactgc
tcggaccgctcggtcgctcaggtgtgcgtcgactgcggcagcctcatttccccgcttctg
gagaagcccccgccctcctggtcggccatgcgccaccgggagacggtctgcaccctgtgc
gggaagagcgactccattgactccgtttctgtcccgtacgttttccgttacttcgtggct
gagctggcagccatgaacatcaaagtcaaactggacgttaagtga
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integrated database retrieval system
