Cyprinodon tularosa (White Sands pupfish): 119791046
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Entry
119791046 CDS
T07496
Symbol
prdm9
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul00310
Lysine degradation
ctul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119791046 (prdm9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctul03000
]
119791046 (prdm9)
03036 Chromosome and associated proteins [BR:
ctul03036
]
119791046 (prdm9)
Enzymes [BR:
ctul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
119791046 (prdm9)
Transcription factors [BR:
ctul03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119791046 (prdm9)
Chromosome and associated proteins [BR:
ctul03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
119791046 (prdm9)
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119791046 (prdm9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
PRDM2_PR
zf-H2C2_2
zf-C2H2_jaz
SET
zf-C2H2_6
Zap1_zf1
zf-Di19
zf-C2H2_3rep
zf-met
zf-C2HE
GAGA
zinc_ribbon_9
Motif
Other DBs
NCBI-GeneID:
119791046
NCBI-ProteinID:
XP_038152810
LinkDB
All DBs
Position
Unknown
AA seq
872 aa
AA seq
DB search
MTDDDKMEWVETTEEVNESEECVSLKNSDPTDLESTETSLQKLLNAVGQDESAEGHDGVC
CEECLPLFQDQTNPDQINGPSFVLDFPTIMGVPQRALLTLPFGLMIGRSSIPCAGVGVIN
QGPALSPGMHFGPYEGEVTTKENAMASDFSWEIYKEDDQYEYVDATNDLYSNWMRYVNFA
RNKDEANLVAVQCKGSVLFHCCRSIQTGDELTVWPSSKLLAHFSSDWTKMLSLKMNRTVN
GDSTSSPIYLCSNCLLSFTTESFLLRHIELFHSEPDAENAEENHASVDEPAASPLQLVDG
IKSKTCDDCGKVFKQVPYLRKHQQCVHSNKRPYCCSHCRRSFSRAYGLLRHQSIHRKTAA
TKRLAPRNSALKAELSNRTEAAASEQMKEIDSDCLQANADIGAETPSAEEAETHQLDSSV
CGNIFTNEEQLQKHKKTVDEDSRTYVCSVCQKCFGKENELRRHLPSHQRENEEDAEDPSA
KPFSCGECWLAFSSVDALQLHITELHSQGADAENQEECSAAAETRDSTLNRAPLRPQRLK
ARSKVSALTKLVAPKRKASKEPGASAVSGAKTVKYKWFSCSRCRQTYGNPEDLKAHVCSL
KQLKCGECRAAFTTSDLLRRHKQVEHGRAQSFCCDSCDKRFSTSAKLKQHQKKKSCQKYH
CTAELFPCSFCQFSFTMKSYLIKHIKRHHPMELLSSCSSDSPAERPEYACQHCGASCPDA
EGLRSHICIQQVKVLYLCTECGKSFTNHYGLKQHQRIHTGEKPYSCSHCGKSFSYVGQLN
VHLRTHTGEKPFLCPHCGESFRQSGDLKRHERKHTGVRPHTCPECGKSFSRPQSLKAHLL
LHQGERPFKCSQCGKSFSRNYHLRRHHQKMHT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgacgacaagatggagtgggttgagacgaccgaggaggttaatgaatctgag
gaatgcgtctccctgaagaacagcgatccaacagatttggagtcaactgaaacatcactc
cagaaattgttgaacgctgtggggcaggatgaaagcgctgaaggacatgatggcgtttgt
tgcgaggaatgtctgcctctgtttcaggatcagactaaccctgatcagattaatggtcca
tcatttgttcttgacttccctacaatcatgggggtaccacagcgagctctactcacatta
ccctttggcctgatgatcggcagatctagcattccctgtgcaggggtaggggtgataaat
caaggaccagcgctctctccaggaatgcattttggaccgtatgagggggaggtgacgacg
aaagaaaacgcaatggctagtgacttttcctgggagatttacaaagaagacgatcagtac
gagtacgtagatgccaccaatgacttgtattcaaactggatgaggtatgtaaactttgcg
cggaacaaagacgaggccaacctggtggcagtccagtgcaaaggcagcgtcctgttccac
tgctgtcgctccatacagactggagacgagctcacagtgtggcccagcagcaaactgctc
gctcatttcagttcagattggaccaagatgttgtctttgaagatgaacagaacagtgaac
ggcgattccacttcgtctccgatttacctgtgctccaactgtcttctctctttcacaacg
gagagcttcctcctccgacacatagaactcttccactctgagcctgacgctgaaaatgca
gaagaaaaccacgcctccgtagacgagcctgcagcctccccgctgcagctcgtcgacggg
attaaatccaaaacatgcgacgactgcgggaaagtttttaaacaagtcccctacctcagg
aagcaccagcagtgcgtgcattccaacaagcggccttactgctgctcacattgcaggaga
agcttcagccgggcgtacggtttgctcagacaccagagcattcatagaaaaaccgcagct
acgaaaagattggcccctcggaactcggcgctgaaagcagaactttctaacaggactgaa
gcagccgcgtctgagcagatgaaagaaatcgactctgattgtttacaagcgaacgcggat
atcggtgccgagactccgtctgctgaagaggcagaaacacaccagctggatagttcagtt
tgtggaaatatcttcacgaacgaagagcaactccagaagcacaagaagactgttgacgag
gattcacgcacttatgtctgctctgtgtgccagaaatgcttcggcaaggagaacgagctg
cgcaggcacctgcccagtcaccagagggaaaatgaagaggatgcagaggacccctccgca
aagccgtttagctgcggagagtgttggctggctttctcttctgtggacgccttgcagctg
cacataacggagctgcactcgcagggagcggatgccgagaatcaagaagagtgttcggct
gctgcagaaaccagagactccaccttaaaccgggcccctctgaggcctcagcgtctcaaa
gccagatccaaagtttctgccctcaccaaactcgtcgcacctaaacgcaaagcatccaaa
gagccgggggcctcggcggtcagcggcgcgaaaacggtgaaatacaagtggtttagctgc
agccgctgcaggcaaacctacgggaacccagaggatctcaaagcacatgtttgctctttg
aagcagctgaagtgtggggagtgcagagctgcttttactacttctgatctgctcaggaga
cacaagcaggtagagcacggaagagcacaatctttctgttgcgactcctgcgataaaaga
ttctccacgtcggcgaagctgaaacagcaccagaagaagaaatcctgccagaagtaccac
tgcaccgccgagcttttcccctgctccttctgccagttctccttcaccatgaagagctac
ctgatcaaacacatcaagcggcaccaccccatggagcttctgtccagctgcagctcagac
agcccggcggagcggccggagtacgcatgccagcactgcggggcgagctgcccggacgca
gaaggtctcagatctcacatatgcatccagcaggtgaaggttttgtatttgtgcaccgaa
tgcgggaagagcttcacaaaccactacggcctgaagcagcaccagcgcattcacacgggc
gagaagccgtacagctgcagccactgcggcaagagcttctcctacgtgggccagctcaac
gtgcacctgaggactcacaccggggagaaacccttcctctgcccccactgcggcgagagc
ttccgccagtccggggatctgaagcgacacgagaggaagcacacgggcgtgaggccgcac
acgtgccccgagtgcggcaagagcttcagccgcccgcagagcctcaaggctcacctgctg
ctgcatcagggagagagaccgttcaaatgcagccagtgtgggaagagcttttccaggaac
tatcacctcaggaggcaccatcagaagatgcacacgtag
DBGET
integrated database retrieval system
