Cyprinodon tularosa (White Sands pupfish): 119791102
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Entry
119791102 CDS
T07496
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctul04040
]
119791102 (scn4aa)
Ion channels [BR:
ctul04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
119791102 (scn4aa)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ
GPHH
YL1
Motif
Other DBs
NCBI-GeneID:
119791102
NCBI-ProteinID:
XP_038152897
LinkDB
All DBs
Position
Unknown
AA seq
1365 aa
AA seq
DB search
MIRAPTMEESAQCYEDKEKSLSSVHSTLHLNEPGLKQRSSSAATVLSAVEELEEAQRPCP
PCWYKFADMFLKWDCCDTWVVLKKWVNFVVMDPFVDLAITICIVLNTLFMAMEHYPMTKE
FNDMLSVGNLVFTGIFAAEMFFKLIAMDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGL
SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKS
YKDCVCKISEDCELPRWHMNDFFHSFLIIFRVLCGEWIETMWDCMEVAGPAMCLIVFMMV
MVIGNLVVLNLFLALLLSSFSGDNLSAVDDDGEMNNLQIAIGRISRGIEWLKGFIVQRIQ
HVLGKRFKDTDKDIMDDVKNKSEEVEMNHFDSSLAFKAPDGILDDPVQSQPTGFTVDEDF
TLNVPIAEGESDYDNLSDDDEDDEDDTEDSDLSESPLQRDDQENTKLFQKTLEEETSVPE
KTKHDDGDSSVCSTADYQPPEPEPEKEEEEEPEPPEPEACFTENCVSKWPCLTVDITSGK
GKKWWNLRKTCFNIVEHDWFETFIIFMILLSSGALAFEDIYIERRRTIKIILEYADKVFT
YVFVIEMLLKWVAYGFKAYFTNAWCWLDFFIVDVSLISLVANWIGYSDLGPIKSLRTLRA
LRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTT
TEELFPISEVNNRSECLALQEATQEARWVNVKINYDNVGTGYLSLLQVATFKGWMDIMYA
AVDSREVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDEDIFM
TDEQKKYYEAMKKLGSKKPQKPIPRPKNPVQGMVFDFISQQVFDIFIMVLICLNMVTMMV
ETDDQSPEKEDFLFKLNVAFIVVFTGECVLKLFALRQYFFTNGWNVFDFIVVILSIAGTM
LSDLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLI
MFIFSIFGMSNFAYVKKEAGIDDIFNFETFGGSIICLFQITTSAGWDGLMLPILNREPPD
CDPEFENPGTDVKGNCGNPGMGMMFFCSYIIISFLVVVNMYIAIILENFNVAQEESGDPL
CEEDFEMFNETWEKFDLDGTMFIEYSQLSDFCDTLQEPLRVAKPNRHHLIKMDLPLVIGD
RIHCLDVLMAVTQMVLGDTVEMAAMRESIEAKFVLSNPTKDSFAPITTTVRHKEEQHAAV
VLQRAYRKYLLKRCICHAAFMHRLKRIGRNNKGEDPPEKEGLLARRLGIFYGSNTDLADE
MEQEVLQTAASQELFNTNCKEVQCGQEPHVQNVIVVPVEITNAVL
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgatccgagctcccaccatggaagagtctgctcaatgttatgaagacaaagagaagtca
ctgagctcggtgcacagcacccttcatctgaatgaacctggcttaaaacagagatcttcc
agtgctgcgactgtgctctctgctgtagaagagctggaggaagctcagagaccctgccca
ccatgctggtacaaatttgcagacatgttcttaaagtgggattgctgtgacacctgggtt
gttttaaaaaagtgggtaaactttgtggtgatggatccctttgttgacctcgctattaca
atatgcatcgttctcaacacccttttcatggcgatggagcactaccctatgacaaaagag
tttaatgatatgctttcagttggaaatctggtttttactgggatttttgcagctgaaatg
tttttcaagcttatcgccatggatccctactattatttccaagttggctggaatattttt
gacagtataattgtcactctcagcctggtggagttgggactggcaaacgtccaggggttg
tctgtcctaagatctttccgtttgcttcgtgtcttcaaactggcaaagtcttggcccacg
ctcaacatgcttatcaagattattggtaactcagtgggagctttgggaaacctgaccttg
gtgctggccatcatcgtctttatttttgcagtagtgggcatgcagctctttggaaagagc
tacaaggactgtgtttgtaagatctctgaagactgtgagctgccacgctggcacatgaac
gacttcttccactctttcctcatcattttccgtgttctgtgcggcgagtggatcgagacc
atgtgggactgcatggaagtggccggacctgcgatgtgcttaatcgtcttcatgatggtc
atggtcattggaaatctagtggtgttgaacctcttcttggccttgctactcagttcattc
agtggagacaacctctcagcggtggatgacgacggagagatgaacaatctacagattgct
attgggaggatctcacgaggcattgagtggttaaaaggatttatcgtacaacgaatccag
catgtacttgggaaacgattcaaggacactgataaggacatcatggatgatgtcaagaat
aaaagtgaggaagttgaaatgaaccattttgattccagtctggcttttaaagcccctgat
gggatattagatgacccagtgcaaagccaacccacaggattcactgtggatgaagatttc
actttgaacgtgccaattgctgaaggagaatctgattatgacaatctgagtgacgatgat
gaggatgatgaagacgatacagaagatagtgatctttctgagagcccactgcagagagac
gatcaggaaaacacaaaattattccagaaaaccctagaagaagaaactagtgttcctgag
aaaactaaacatgatgacggggattcttcagtctgcagcacagctgactatcaaccgccg
gagcctgagcctgaaaaagaggaggaggaagaaccggaaccaccggagccagaggcgtgc
ttcactgagaactgtgtgagcaaatggccatgtctgactgtggatataaccagtggcaaa
ggaaaaaaatggtggaatcttagaaaaacgtgtttcaacatagtggagcatgactggttt
gaaaccttcatcatcttcatgatcctcctcagcagcggcgctctggcctttgaagatata
tacatagaaagacgacgaaccattaaaataattcttgaatatgcagacaaggttttcacc
tacgtgtttgtcattgagatgctccttaaatgggtcgcatacggcttcaaggcctatttc
accaacgcttggtgttggttagacttcttcatcgtggatgtttccttgattagtttagtt
gcaaactggattggctactctgatcttggtccgataaaatccctgagaaccctcagagcg
ctaaggcctcttcgagcgctgtcaagatttgaaggaatgagggtagtggttaatgctctg
gttggagcgattccctccatcttcaatgtactcctggtgtgtctgattttctggctcatc
ttcagcattatgggggttaatttgtttgcggggaagttctatcgatgcataaacaccacc
acagaggagcttttccctatatctgaggtcaacaatcgaagtgagtgcttggcccttcaa
gaagccacacaagaagctcgatgggttaacgtcaaaattaactatgacaatgttggcacg
ggctacctctccctgcttcaagtggcaacttttaaagggtggatggacataatgtatgct
gctgttgactcaagagaggttgaggagcaaccatcttatgaaatcaacctttacatgtac
atctattttgtcatcttcatcatttttggttctttcttcaccttaaatcttttcatcggt
gtcatcattgacaatttcaaccaacaaaagaaaaagtttggagatgaagacatttttatg
acagatgaacagaaaaaatactacgaggccatgaagaaactcggttcaaagaagccacag
aagccaattccacgaccaaagaacccggtccagggcatggtgtttgatttcatcagtcaa
caggtctttgacatcttcatcatggttttaatctgcctcaatatggtgaccatgatggta
gaaacagatgaccaaagcccggagaaagaggatttcctctttaagttaaacgttgccttc
atcgttgtcttcactggagagtgtgtgttgaagctcttcgcgctgaggcagtacttcttc
accaatggatggaatgtttttgatttcatcgtggtcatcttgtcaatagcaggtacaatg
ctgtcagacttaattgagaagtactttgtttcccctacgctcttcagagtgatcagacta
gccaggattggcaggattctgcgccttattaaaggagctaagggtatccggacgcttctt
tttgccctaatgatgtcccttcctgcattgtttaacatcggcctacttcttttcctgatt
atgttcatcttctctatatttggcatgtcaaattttgcctatgtcaagaaagaagctgga
attgatgatatttttaactttgagacttttggcggcagcatcatctgcttgtttcagatt
acgacatctgcaggctgggatgggcttatgcttccgatattgaacagggaacctccagac
tgtgaccctgaatttgagaatccagggacggacgtaaaggggaactgtggaaacccgggg
atggggatgatgttcttctgcagctacatcatcatttcattcttggtggtggtcaacatg
tacattgccatcatcttggagaacttcaatgtggctcaagaagagagcggtgacccactt
tgtgaggaggactttgagatgttcaacgaaacttgggagaaatttgacttggatggaacg
atgtttattgagtacagccagctttcagatttttgtgatactttgcaggagcctctcagg
gtggccaagcccaaccggcatcatctgattaaaatggatctgcccctggttattggggac
aggatccactgcttggatgtattgatggctgtcacacagatggtattaggagatacggtg
gagatggcagcaatgcgggaaagcattgaggccaagttcgtcctgagcaaccccacgaag
gactcctttgcaccaattaccacaacagtacggcacaaggaagagcaacatgcggctgtc
gttcttcaacgagcttaccgcaaataccttctgaagcgctgcatatgccatgctgctttt
atgcacagattgaaaaggattggtagaaacaacaaaggtgaggatcctcctgagaaagaa
gggttgcttgcacgtaggctggggattttctatggaagtaatacagaccttgccgatgaa
atggagcaagaggttttacaaactgcagcaagccaagaactctttaacacaaactgcaaa
gaggtccagtgtggtcaggagcctcatgtgcagaatgtgattgttgttcctgttgaaatt
accaatgcagtgttataa
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