Cyprinodon tularosa (White Sands pupfish): 119791207
Help
Entry
119791207 CDS
T07496
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
ctul
Cyprinodon tularosa (White Sands pupfish)
Pathway
ctul00780
Biotin metabolism
ctul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ctul00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
119791207 (hlcs)
Enzymes [BR:
ctul01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
119791207 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
119791207 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
119791207 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
119791207 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_C
Motif
Other DBs
NCBI-GeneID:
119791207
NCBI-ProteinID:
XP_038153103
LinkDB
All DBs
Position
Unknown
AA seq
912 aa
AA seq
DB search
MLITLCYVYMWVLFHKCYSVLIRNSLSRLRSRKSRLCLGFCSGSGSASTSCTAPPPGLSG
AAPNSHNLTGPGDNVFLQLGDKAVYVTEPQACGDLSQWTVLTSSLIDAPWIDNISFIIEA
AESKVGFASPATNKQVLKWSDYCFPLALSPGQPFRAVAQTTEENFTRLGVAFIEDRLQLD
SGLVPSKIVPVLLQDGPLTKACDRRCLQIPHLLPSSPPKHFVSGSFSQLLPADQQNPQCR
KGSLLIAPEVKRKLEECRGSEPLPSSQIVHQEYHHHHMEGHGHPLHLSSCHECLELENST
ILSVKYASAENIPDLPDDHSVGPDSVEGCFSELEHDFKVSSGQSGGCSTAPNVLVYTGGC
QERFQAIRKLLSDCINVENNIIYPLLQEQALNDPWLDNTRLLVLAEEEPLTPELQTRFLT
YLCNGGKVLGLGSALCPTGLHLEVREGQSLQRRRLIFTREDSTELEATILTSGKVYIRDP
REGGEVELWGELKGDVSHPREMVIVRLTHGADGGEAVLCQVYFDIASHSNNLNSSDFDEL
KVSNELRYEILTEILNSLGVNCEARPTPAPGPVYLLATSQERKASFLKVLQKRADEDGII
RFSKASFRMVPSTGPCEGPVVPEDCLSLITESEDTKQFMETYCKQLRTKELGNTVLYAEV
ATSTMNLLEGLLLHLPKNVGVISVASQQTQGKGRGRNAWLSPLGCAMFTVGVRVELDSRL
GQRIPFLQHLAALAVVEAVCTLPGYQDINLRVKWPNDIYYSNLMKLGGVLVTSTVVGSTF
HLLIGCGFNVTNSNPTVCINDLIHQYNRQNHCSLEPLSCSQLIALTLNCLEDLIHSFQHK
GPDAVLPTYYKRWLHSGTLVRLWSEEGPEAQVVGLDDNGFLQVYNKEEGVISVEPDGNSF
DMLKNLVVRKRN
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgttaataactctgtgttacgtctacatgtgggtcctttttcacaagtgttactcggtg
ttgatccgcaacagtctgtcgaggctgaggagcaggaagagccgcctctgcctcggcttc
tgttccggctccggttcggcttctacatcctgcacagcaccgcccccaggactcagcgga
gccgctccaaattcacacaaccttaccggtcccggagacaatgttttcctccagctcgga
gacaaggccgtctatgtcacggagcctcaggcgtgtggtgacctcagccaatggaccgtt
ctcacatcctctctgattgatgctccttggatcgataacatctccttcataatagaagct
gctgagagcaaagtgggatttgcttctcctgcgacaaataagcaagtgctgaagtggtct
gactactgtttcccgttggccctcagccctggccagccattcagagcggtggcccagacc
actgaggagaacttcactcgtctcggggttgcattcatcgaagatcgccttcagctggac
agtggacttgtgccttccaagatagtcccagtccttctccaagacggtcctttaaccaaa
gcgtgtgaccgacggtgtctgcagatcccgcacctgctcccctcctctcctcccaaacac
tttgtctctggctccttctctcagctgctgccagccgaccagcagaacccacagtgccga
aaaggtagtcttcttattgccccagaggtaaagaggaagttagaggagtgtcgggggtcg
gagcctctacccagctctcagattgtccatcaggaataccatcatcaccacatggagggc
catggacacccacttcatctctccagctgccatgaatgtttagaacttgagaacagcacc
atcctctccgtcaaatacgcctcagctgagaacattccagatctaccagatgatcattcg
gtaggaccggacagtgtagaagggtgttttagcgaacttgaacatgacttcaaggtttct
tctgggcaaagtggtggatgttcaacagcccctaatgttctcgtgtacacgggtggatgc
caggaacgctttcaagccattcgtaagcttttgtcagactgcataaatgtagaaaacaat
ataatataccccctcctgcaggaacaggcactaaatgacccatggctggacaataccaga
ctcctagttctggcagaagaggaacccttgacccctgagcttcagacccgctttctcaca
tacttatgcaacggtggaaaggtactggggctgggctccgctttgtgcccgacgggtctc
catctggaggtcagggaaggacaatccttgcagcgccgaaggttgattttcaccagagag
gatagcacagagctggaagcaaccattttaacaagtggaaaggtctacattagagacccc
cgggagggaggagaagtggagctttggggggagctgaaaggtgacgtctctcatccgaga
gaaatggttatagttcggctaacgcatggagcagacggcggggaagctgtcctctgtcag
gtttattttgacattgcatcacactcaaacaacctcaattcaagtgattttgatgagctg
aaggtcagcaatgagctgcgctatgaaatcctgactgagatcctgaactcactgggtgtg
aactgtgaagcgcgaccgactcctgccccgggtcctgtctacctgttggccacctctcag
gagcgcaaagcaagtttcttgaaggtgctacaaaagcgggcagatgaagacgggatcatt
cgattctccaaagcctccttcagaatggtgcccagcaccggcccatgtgaaggtcctgtg
gtgcccgaggactgcctgtctttgatcacggaatccgaggacaccaaacagtttatggag
acctactgcaaacagctgaggaccaaagagctgggaaacacagtgctctacgctgaggtc
gccacttccaccatgaacctacttgaagggctgctgctccacttgccaaagaatgttggt
gtgatatcagttgcttctcagcaaacacagggaaaaggccgaggcagaaatgcctggctc
agcccactgggctgtgccatgttcactgttggggtccgagttgagctggactccaggctc
ggtcaaaggattcctttcctgcaacatctggctgctttagctgttgtggaagccgtttgc
acacttcctggatatcaggacatcaacctgagagtaaaatggcccaacgacatctactac
agtaacctgatgaagctcgggggggttttggtcacatccaccgtcgtaggatcaactttt
catctgcttataggatgtggctttaatgtgacgaacagcaacccaacagtgtgcattaat
gacctgatccatcagtacaacaggcagaaccactgcagtctggagcctctcagctgctcc
cagctcatcgctctcactctgaactgcctggaagatctcatccatagttttcagcacaaa
ggaccagatgctgttctgcccacctactataaaagatggcttcacagtgggactctggta
cgtctgtggagcgaggagggaccagaagctcaggtggtaggcctcgatgataacggcttc
ctgcaggtgtacaataaagaggaaggcgtcatctctgtggagcctgatgggaactcattt
gacatgttgaagaacctggtggtgaggaagcggaactag
DBGET
integrated database retrieval system