Cuculus canorus (common cuckoo): 104055347
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Entry
104055347 CDS
T08597
Symbol
PARP4
Name
(RefSeq) poly [ADP-ribose] polymerase 4
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03410
Base excision repair
cuca04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104055347 (PARP4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
104055347 (PARP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cuca03032
]
104055347 (PARP4)
03036 Chromosome and associated proteins [BR:
cuca03036
]
104055347 (PARP4)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
104055347 (PARP4)
Enzymes [BR:
cuca01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
104055347 (PARP4)
DNA replication proteins [BR:
cuca03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104055347 (PARP4)
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
104055347 (PARP4)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104055347 (PARP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
VWA_2
BRCT
BRCT_2
VWA_CoxE
PARP_reg
PTCB-BRCT
LIG3_BRCT
BslA
Glyco_hydro_65m
Motif
Other DBs
NCBI-GeneID:
104055347
NCBI-ProteinID:
XP_009554752
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MAVFANCVFFIKVKHLSIREKSRLKACIKENGGVVNFTLTHECTHVIVDTADVLSCHDQK
KILKHQLPVLCADFIWKSVEKGKLVEVEAYKVNKSKNDNSDQRPDRCDVEDLSRSENENA
TRKNENVSNLIEDSEGRIESEMETRFYGEDDQDIPFFPQDFEVAKYNVLEKINSEESKDF
VVVELQCSREHCKFPFRLYAHFRTQEDKQCVATTAEEIREKYETFIADLKSQDFRLRETF
PPEADWLGSAVLQKVRLEEAIHSSAICQEVSDFVELIWTEAIGHLDSLLLKSVNNISLND
VSKAEGILLQVKNALDEGADEEALQEMMKEFYQVICHKSEIDYKVSKKLLSKKQDLCQLI
RDMLNISEINMACPNPSSLAKYRALRCKIKPVDSRSNEFLNVEQEVLKNNYNDCEVRILQ
VYEVGRITEAEEFLSSLGNIQSLFHASSARNFMGILSRGLLMPKVVVEDHGLKRTDIGNL
GSGIYFSNSISTSIKYSSPSETDGTRFLAVCDVALGSCLDLYERDYSLNNAPSGYDSVHG
VRKTALVSSDFEDDEFVVYKTCQVKIRYIVKFCLAEDQIKPFQSATDVELEEENNEPESQ
CHLQHESFALPDADLSHHVKTGLQDRLGNPVPLEGVYIKGRIIDFVAQIAMFQTYTNHNT
QPIEAKYVFPLDDKAAVCGFEAFINGKHVLGEVKEKKQAHREYQKAISQGDGAYLMDQDA
LDIFVISVGNLPPNSTVVIKITYITELSFQHGSITFHLPASLSPWQQDKALNENTQDTVK
KVCVKQAETLKNGFSLDMSIEMPSAIERIHSWTHTLKIKKTECKAVIKTVENSSLGISGF
VVDIWISEVYLPRMWVEKHPNKMSEACMLVFQPEFDTTFEEEYLSSEIIILLDCSNSMAG
SALHQAKQIALRVLELFCFKQTVTVVKFGTNFTELSSFSINIINDLALLKEFITSATATL
GSTDLWKTLRYLSLLSPSQGHRNIVLISDGHIQNESMTFQIVKDNVQHTRLFTCGVGSTA
NRHMLRSLSHYGAGAFEYFDPKSKYNWETKIQSQVSRISSPECSSVSIKWQQFNTGAPEP
MQAPAQIQSLFNNERLLVYGFIPHCTQATLKAIINDQELQTVVSTTELQKTTGTVLHKLA
ARAFISDYEDGILHENETEHEMKKQILKNMIIHLSLENSVISQFTSFVAVEKRDADETSA
DDAPNILEIIAQEDVDFLPYMDWDGKSVESGSLFSKDLAYGTMTNVEEQVIPAFGVSQAH
NKKALSKRKRKQKAEHWHDVIALEEGFPEAFDLMEQSRCSRTTAEEKIPQRIELMSVNWK
EVFALQNQDGSWNLSPQLGKIFKFDVDNLINNFLIRKGIQSLGPNGKEKLLQLIATLLVL
QLIRCTKALKGIVFKTLMKLDDSCNSSGVHWALELIKKAIEWARRVERQFPSICYRLELG
KDWDSATKKILGINSSNIDLLST
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctttgcaaactgtgtgttctttattaaagtcaaacacttatccattcgggag
aagagcaggctgaaagcatgcataaaagaaaatggtggagtagttaattttacacttact
catgagtgtacacatgtgattgtggatactgctgatgtcctcagctgtcatgatcaaaaa
aagattctgaagcatcagctccctgttttatgtgcagatttcatttggaaatcagttgaa
aaagggaagcttgtagaggttgaagcatataaggttaataaatcaaaaaacgacaattct
gaccaaaggccggacagatgtgatgtggaagacctgtcacgttctgaaaatgaaaatgcc
acaaggaaaaatgaaaatgtttccaaccttattgaagacagtgagggcagaattgagtct
gaaatggagactagattttacggtgaagatgatcaagatattccttttttcccgcaagat
tttgaagttgcaaaatacaatgtccttgaaaaaattaactccgaggaaagcaaagatttt
gtagttgttgaattacagtgttccagagagcattgcaagtttccatttcgactatatgca
catttcaggacacaggaggacaaacaatgcgtagctaccactgctgaagaaataagagaa
aagtacgagacttttattgcagacctgaaaagccaggatttccggctcagagaaactttt
ccaccagaagcagactggttaggttctgcagtattgcaaaaggtacgtctagaagaagcc
atccattcgagtgctatatgtcaggaagtcagtgattttgtggaattgatctggacggaa
gctattggccacctggatagtttactacttaaatcagtaaacaatataagcctaaatgac
gtgagcaaagcagaaggtattttactccaagtaaagaacgcactggatgagggagctgat
gaggaagcactacaagagatgatgaaagaattctatcaagttatatgtcacaaatctgaa
atagactataaagtttccaaaaagctgttatctaaaaaacaggacctgtgccagctaatc
agagacatgcttaacataagtgaaataaatatggcttgcccaaacccatcatctttggcc
aaataccgggctctgaggtgcaagattaaacccgttgactcaaggagtaatgaatttctc
aatgtggaacaagaagtgttaaaaaacaattacaatgactgtgaagtgagaattttacaa
gtgtatgaggttggcagaataactgaagcagaagaatttctgagcagtcttggtaacatt
cagtccttattccatgcatcatctgcacgcaacttcatgggaattctttccagaggacta
ttaatgccaaaagtggttgttgaagatcatggtctgaaaagaactgacattggaaatctg
ggcagcggcatttacttcagcaattctattagcaccagtattaagtattcttcacccagt
gaaacagatggaacccggttcctggctgtttgtgatgtggcacttggatcctgcttagat
ttatatgagcgagattattcattaaataatgcaccatcaggatatgacagtgtgcatgga
gtccgtaaaacagcactcgtctcttcagactttgaggatgatgaatttgttgtgtataaa
acctgtcaggttaaaattagatacatcgttaagttttgccttgctgaagatcaaataaaa
ccatttcagtctgcaactgatgtggaactggaggaagaaaacaatgagccagagtcacaa
tgtcatttacagcatgagagctttgcattaccagatgcagatctttcacatcatgtcaaa
actggtcttcaggacagattgggaaatcctgtccctctggaaggtgtttatatcaagggg
aggataatagactttgtagcacagatagcaatgtttcagacctacaccaatcacaacact
caaccaattgaagcgaaatatgtctttcctttggatgataaagctgctgtttgtggattt
gaagcttttatcaatggaaaacacgtccttggagaggttaaagaaaagaaacaagcacac
agggaatatcagaaagctatcagtcagggtgatggagcatatctaatggaccaggatgcg
ctggatatttttgtaataagtgttggaaacttgcctccaaattctacagttgtgatcaaa
atcacctatatcactgaactgagtttccagcatggttctatcacttttcatctgcctgct
tccttgtcaccatggcaacaggacaaagcattaaatgaaaacactcaggatacagtaaaa
aaggtttgtgttaaacaagcagagacactgaaaaatggattttctctggatatgtctatt
gagatgccatctgctattgagcgcatacatagctggacacacacactaaaaataaagaaa
acagagtgcaaggctgtgatcaagactgtggagaacagctccttgggcattagtggcttt
gtcgtagatatctggatttctgaggtctacctacctcgaatgtgggtagagaagcatccc
aacaaaatgagtgaggcttgcatgcttgtattccaaccagagtttgacacaacatttgaa
gaagagtacctgtccagcgaaattattatcttattagattgctcgaactccatggcaggt
tcagctttacaccaagcaaagcagattgctttacgtgttttggaattattttgtttcaaa
caaactgtgactgtagtcaaatttggcacaaatttcacagaactttcttctttttcaatc
aacatcataaatgatttggcattgctgaaggagtttattacatctgctaccgcgacatta
ggaagcaccgatttatggaagacattacgttatttaagtctgctatctccttctcaagga
caccgtaacattgtccttatatcagatggacacattcagaatgagagcatgaccttccag
atcgtgaaagataatgtccaacatacaaggttatttacatgtggtgttggttccacagca
aatcgacacatgctgagatcgttgtcccattatggtgctggagcatttgaatactttgac
ccaaaatcaaagtacaactgggagacaaagatacagagtcaggtatctagaatatcttct
ccagaatgcagttcagtttctattaaatggcaacagtttaatacaggtgcaccagagcca
atgcaggctccagctcaaatacagtctttatttaacaatgagagacttcttgtctatgga
ttcatccctcactgtactcaggccaccctaaaagcaataataaatgaccaagaactacag
actgtggtgtctactactgaactacagaagacaacaggaacagtgctgcacaaactcgca
gcaagagctttcattagtgactacgaagacgggattcttcatgagaatgaaacagaacat
gagatgaagaaacaaatcttgaaaaacatgattattcacctcagcttggagaactccgtt
ataagccagtttaccagcttcgttgcagttgagaaaagggatgctgatgaaacatctgct
gatgatgctccaaacatcctggaaattattgctcaagaagatgtagattttttaccttac
atggactgggatggaaagtcagtggaatctggcagcttattttcaaaagaccttgcctat
ggtaccatgactaatgttgaagaacaagttattcccgcatttggcgtttctcaagctcat
aataaaaaagcattgtcaaagcgtaagcgcaagcaaaaggcagaacattggcatgatgtt
atagctcttgaagaaggatttcctgaggcctttgaccttatggaacagtcaaggtgttcc
agaacaacagcggaagaaaagattccacagagaattgagttgatgtctgtaaactggaaa
gaagtttttgcgctccaaaatcaggatggctcttggaatctcagtccacagttgggaaaa
atcttcaagtttgatgttgataatttaattaacaatttcctcattagaaaaggcatccag
tcacttggccccaatggaaaagaaaagctactgcaactgattgctactcttcttgtgcta
cagttgatacgctgcacaaaggcattgaaagggatagtcttcaaaaccctgatgaaacta
gatgattcatgtaattcaagtggtgttcactgggctctcgagttgatcaagaaagcaata
gagtgggcaagaagagttgagaggcaatttccatctatttgctatcgccttgaactcggg
aaagactgggattccgccaccaagaagatactgggtatcaattcatctaacatcgatttg
ctttctacttaa
DBGET
integrated database retrieval system
