Cuculus canorus (common cuckoo): 104057138
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Entry
104057138 CDS
T08597
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cuca02000
]
104057138 (SLC6A4)
Transporters [BR:
cuca02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104057138 (SLC6A4)
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GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
104057138
NCBI-ProteinID:
XP_009556762
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All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKKATSNETEPLTSKKDVSDCNEGEDCKENGLLMRNPKPALQLAEDGNKVHPSQGDKGE
AAQISNGYSGVQSTVPCNGMGEVEDAQGTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTLMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLVSSFTSELPWTSC
TNPWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTICLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWHKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCATSFVSGFVIF
TVLGYMAEMRKEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGITQFCNDVKEMLGFTPGWYWRVCWVAISPIFLLFVTCSFLSNP
PELRLFGYNYPYWTTVVGYCIGTSSIICIPIYMVYRLIITSGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaagcaatgagactgagccactgacttctaagaaagatgtttca
gactgtaacgaaggagaagattgcaaagagaatggacttctgatgaggaaccctaagcct
gccctacagctagcagaggatggcaacaaagtccaccccagccagggagataaaggggag
gcagctcagatctccaacggttattcaggggttcagagcactgttccctgcaatggaatg
ggagaggtggaagacgcccagggcactgccccagcggccaccaccaccactacaaccacg
acttcgaccacctgcggagcagaaggccagcagcagctgatggagctagaagacagagag
acctggagtaaaaaaattgactttctcctctctgtcattggatatgcagtggatctggga
aacgtatggagatttccgtatatatgctaccaaaacggaggaggagcattcctcattcct
tacacactcatggccatctttggagggattcctcttttctacatggaacttgcactagga
cagtaccacaggaatgggtgtatttcaatctggagaaaaatctgccctatattcaaagga
attggctttgccatctgtataatagatctttacgtagcctcctactacaacaccattatg
gcttgggccttttactacctcgtatcctccttcacgtcggagctgccgtggaccagctgc
acaaatccttggaacacaggcaactgcaccaactacttcagcaaggacaacgtcagctgg
tccctgcactccatctctcccgcagaagaattttatacccgccaagttctacaggtgcac
aggtccaatgggctggatgacctggggggcattagctggcaactgaccatctgtttactg
ttaatcttcaccattgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtgtgggtgactgccacgttcccttacatcatactcttcatcctgctagtgagaggggca
accttgcctggggcttggagaggtgtcctctactacttgaaaccagactggcacaaactc
ctggccactgaggtttgggtggatgcagcagctcagatttttttctccctcggtccaggt
tttggggtcctattggcctacgccagctacaacaaattccataacaactgctaccaagat
gctctggttaccagtaccgtgaactgcgcgactagttttgtgtctgggtttgtcatattc
actgtgctgggatacatggccgagatgaggaaggaagacgtatcagaggttgccaaagat
accggacccagccttctcttcattacatacgctgaggccattgctaacatgcctgcttcc
actttctttgccatcatctttttcctgatgttactcacgctgggattagacagcacgttt
gcaggactagagggagtgatcactggagtactggatgaattcccgcatgtctggagcaaa
cgcagggaattgtttgtccttggtctgaccattgtttgctttttggggtcattagcaacc
ctgacatttggaggtgcatatgtggtaaagctgtttgaagaatacgccactggtccagct
gtcttaactgttgtgttcctggaagcggttgctgtggcctggttctacggcatcacccag
ttttgcaatgatgtgaaagaaatgctgggcttcaccccaggctggtactggcgagtgtgc
tgggtagcaatcagtcccatcttccttctgtttgtcacttgcagctttctgtccaatcct
cctgagctacggctttttggttacaattatccctactggaccacagtagtgggttattgc
ataggaacctcttctatcatctgtattcccatctacatggtttaccggttgatcatcact
tcaggaacacttaaagagcgtattctgaaaagcattactccggaaacagcgacagaaatt
ccttttggagacatccgcatgaatgcagtataa
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