Cuculus canorus (common cuckoo): 104059141
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Entry
104059141 CDS
T08597
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04020
Calcium signaling pathway
cuca04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104059141 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104059141 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cuca04040
]
104059141 (GRIN1)
Ion channels [BR:
cuca04040
]
Ligand-gated channels
Glutamate (ionotropic)
104059141 (GRIN1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
104059141
NCBI-ProteinID:
XP_009559037
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
SFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQLNATSVTHKPNAIQMA
LSVCEDLISSQRHRGPSVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIGLTTRMSIYS
DKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEEKES
KSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVIILSASEDDA
ATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESAHISDAVAVV
AQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKF
ANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPF
VYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVM
NFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFS
KPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFK
VNSEEEEEDALTLSXXXXSGGALLSSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANL
AAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNY
ESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQN
VSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLI
FIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRSITSTLASSF
KRRRSSKDTPCRMVPQECQRDRLAPWSQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTA
PGGDACVPHRQLLQLE
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
tccttcgcccgcgccggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcacc
aagaagcatgagcagatcttccgcgaggcggtgaaccaggccaacaagaggcacggcaca
tggaagctccagctcaacgccacctcggtcacgcacaagcccaacgccatccagatggca
ctctccgtctgcgaggacctcatctccagccagagacaccgcggcccctctgtctatgca
atattagttagtcaccctcctgctcccaacgatcacctaacaccaacacccgtatcatac
acagctggcttctacaggatccctgtcattggtctgacaacacgcatgtctatatattct
gataagagcatccacctctcctttttgcgcacggtcccaccgtactctcaccaggccaac
gtctggtttgagatgatgagagtcttcaactggaatcacgtcattctgatagtcagcgac
gaccatgaaggtcgtgctgcacaaaagaagctggagactctcttggaggaaaaagagtcc
aagagtaaaaaaaggaactatgaaaacctcgaccaactttcctatgacaacaagcgagga
cccaaggcagagaaagtccttcagtttgatcctggaacgaaaaacgtgacatcgctgctg
ctggaggccaaggagctggaggctcgcgtcatcatcctttctgccagtgaggatgatgca
gctacagtgtacagatcagcagccatgctcaatatgactggctccggctacgtgtggctg
gttggggaacgggagatatcaggcaatgccctgcgttacgctcctgatggagtgattggt
ctgcagctcatcaacgggaagaatgagtcagcccacatcagtgatgctgttgcggtggtg
gcccaggccgtgcacgacttgtttgagaaggagaatatcacagacccgccgcggggctgc
gtgggcaacaccaacatctggaagacaggaccccttttcaagagggtgttgatgtcctcc
aagtactcggagggtgtcactgggcgggtggagttcaatgaggatggggacaggaagttt
gccaactacagcatcatgaacctgcagaatcggaaacttgtccaagttgggatttacaat
ggcagccatgtcttgaccaatgacaggaagattatctggccaggaggagaaaccgagaaa
cctcaaggctatcagatgtcgaccaagttgaagatcgtgacaatccaccaagagcccttt
gtgtatgtgaagcccacgcaagcagatgggacgtgcagagaggaattcaccatcaacgga
gatcctgtgaaaaaggtcttttgcactggacccaatgagaccatcccaggccgccccacc
gtggcactgtgctgctacggcttctgcatcgacctgctcatccgactggcaggggtgatg
aacttcacttacgaggttcacctggtggctgatggtaaatttggtacccaagagcgggtt
aacaacagcaacaagaaggagtggaacgggatgatgggggagttgctaagcggccaagcg
gacatgattgtggctcccctcaccatcaacaatgagcgggcacagtacattgagttctcc
aagcccttcaagtaccagggcctcaccatccttgtgaagaaggaaatcccccgcagcacc
ttggactcgttcatgcagcctttccagagcaccctctggctgctggtggggctgtcggtg
cacgtggtggcagtgatgttgtacctcttagaccgattcagtccatttggccgattcaaa
gtgaacagtgaagaggaagaggaagatgccctgaccctctcctnnnnnnnnnnntccggg
ggagccctgctgagctctggtatcggagaaggtgctccccggagtttctctgcacgcatt
cttggcatggtgtgggctggcttcgctatgatcattgtggcttcatacactgccaacctg
gcagccttcctggtgttagaccggcctgaggagagaattacaggcatcaacgacccccgg
ctgcgcaacccctctgataagttcatctatgccacggtgaagcagagctcggtggacatc
tacttccgccggcaggtggagctgagcaccatgtaccggcacatggagaagcacaactac
gagagcgctgccgaagccatccaggcagtgagggacaacaagctccatgccttcatctgg
gactcagcggtgctggagtttgaagcctcccagaaatgtgacctggtgacgacgggggag
cttttcttccgctctggcttcgggattgggatgcgcaaggacagcccgtggaagcagaac
gtctccctggccatcctcaagtcccacgagaacggcttcatggaggatttggacaagact
tgggtgaggtatcaggagtgtgattcccgtagcaatgccccagcaacactcacctttgaa
aatatggcaggtgtgtttatgctggtggctggaggtattgttgccgggatatttttaata
ttcatagaaatagcttacaaaaggcataaggacgcgcggaggaagcagatgcagctggcg
tttgcagccgttaatgtgtggaggaaaaacctgcaggatagaaaaagtggtagagcagaa
cctgaccctaaaaagaaagccacttttaggtccatcacctccaccctggcctccagcttc
aagagacgtaggtcctccaaggatacgccctgcagaatggtccctcaggagtgccagaga
gacaggctggcaccatggagccaagacagccctgggaagctaccaccccactctgaacgt
cctagcgcccaccatcacccgagctgcacagcctctccgcggcacatcatccccaccgcc
ccaggaggagatgcatgtgttccccataggcagctcctgcaactcgaatag
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