Cuculus canorus (common cuckoo): 104060569
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Entry
104060569 CDS
T08597
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca00310
Lysine degradation
cuca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104060569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
104060569
03036 Chromosome and associated proteins [BR:
cuca03036
]
104060569
Enzymes [BR:
cuca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
104060569
Transcription factors [BR:
cuca03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104060569
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104060569
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-H2C2_2
zf-C2HE
zf-C2H2_11
PyrI_C
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
104060569
NCBI-ProteinID:
XP_009560671
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
MRDSKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLPKLMIPSPTSEPQLVTEDRQGE
AINCASDDLDDDDGEEDDDEEDEEEIENTSMPKENAEMPLICEEKLDSVEEQKSTSDESP
ESSPKKKLVVKIPKGRGESNSDVQETFMFPCQHCERKFTTKQGLERHMHIHISTLNHAFK
CRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLDNVADNQVIVDDGLKDDLNVS
GLVQDSVILDSEKVSQEMSNSVSAEENKEPKELHPCKYCKKVFGTHTNMRRHQRRVHERH
LIPKGVRRKGFFTEEPPLPTEQAPPVQSVYIASTEIEEDGEVDDVYIMDISSNISENLNY
YIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVEISSNVKVTQTHMNEPPKEPS
SSGSNESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPLTISPESLPFHKEKGVYLSSK
LKQLLQTQDSKKVTPASEIPKLGPSVTSSPILPPVSSRFKRRTSSPPSSPQHSPVLRDFV
KSGEGKTVWNDNIRSSKMPKLESHSNSPAWSLTGREEKETLSPLCFEDYKLSKDWTAAPA
FGSVCNQQPLDLSSGVKQRSDAKNKNQVPWESVLDLSVHKKPCSDAEIREYKENSIQPTC
SGVKKKKPTTCMLQKVLLNEYNGTDAAPDSTLSVNSSESPSKSLEPPAEPDMDPSLSASS
SLDTQPLSSSVSPVPQASTVPVVCQLPPLLIPTNPPSPPPCPPVLTVASSPPPLLPTMPL
PTPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPVPSVEPLISAASPGPPTLS
SSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLENTLPIIKQEEPENEQQKARED
PHTSSESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCVQLFRDKTD
LSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKACTHHEFESGTLRPQNFTD
PSKANAEHMQSLPEDSLEPSKEEEDEDLNDSSEELYTTIKIMASGVKSKDPDVRMGLNQH
YPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKSVDNMPELHKHILA
CASASDKKRYTPKKNPVPLKQTVQPKNGLVVIAGPGKNAFRRMGQPKRLNFNVEISKMSS
NKLKISALKKKNQLVQKAILQKKKSAQQKAELKNNPSESDSHICPYCNREFTYIGSLNKH
ASYSCPKKPISPSSKKNSSKKSVSSSPASSEKGSNQRRRTADAEIKMQSMQPHLGKTRAR
TSGPAQIQHPSASFKSKQNVKFVPSMRSKKPNSSSSLRNSSPVRVSRMSHVDGKKTKGIT
KNNSSGMSSKASRKLHVRIQRNNKAVLPSKSAVASKKKADRFAAKSRERIGGPITRSLQQ
AANAEAAESKRDESSTKQELKDFRNLL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atgagggattctaaagagggtcataaagaggaagatgaaacgccttccgtttctgctgtg
ctgtccctggaacaaacagccgtgattcaggaaatggtaaatcaagatgtacttccgaag
ctgatgatccctagtcctaccagtgagccacaattggtgactgaagacagacaaggagaa
gcaataaactgtgcatcagatgatttagatgatgatgatggtgaggaggatgatgacgag
gaggatgaagaggagatagaaaatactagtatgcctaaagaaaatgctgaaatgcctttg
atatgtgaagaaaagttagactctgtggaggagcaaaagagtacgtcggacgaatctcca
gaaagctctccaaagaaaaagcttgttgtgaaaattccaaaagggaggggtgaatcaaac
agtgatgttcaggaaacattcatgtttccctgtcagcattgtgagagaaagttcacaacg
aagcaaggacttgaacgccacatgcacatccatatatctactcttaaccacgctttcaag
tgtagatattgtgggaaagcctttggtactcaaattaacaggcgaagacatgagcgtcgc
cacgaggcaggaccaaaaaggaaaccgttcttaacactaacgtcatcacagcacttggat
aatgttgctgataaccaagtaattgtggatgatggtcttaaagatgacttgaatgtttcc
ggtcttgtacaagattcggtcatcttggattctgagaaagtttcccaagaaatgtcaaac
tccgtttctgctgaggaaaataaggagcccaaagaattgcatccatgcaaatactgcaaa
aaggtttttggaactcacaccaacatgcggagacatcagcgcagggttcatgagcgtcat
cttattcccaaaggtgtcagaagaaaaggattcttcactgaagagccaccacttccaaca
gagcaggccccaccagtccagagtgtatacatagcaagtacagaaatagaagaggacggt
gaagtagatgatgtctatattatggatatttccagcaatatctctgagaatttaaattat
tacattgatggtaaaatccagtccaatagcagcacgagcaattgtgatgtgattcagatg
gagtccaactctgcagacttgtatgggctaaactgtataatcagtcctgtcacagtggaa
atctcctcaaatgtcaaagttacacaaacacatatgaatgaacctcccaaggaaccctcc
agcagtgggagcaatgaatccaaaaagagaagaactgccagccctcctcttgtaccaaaa
ataaaaactgaaatagacccagaacctataactcctactagttctttaaatcttcctctt
accatttcaccagaaagcttaccttttcataaagaaaaaggtgtttatttgtcatcaaaa
ttaaaacagcttcttcagacacaggacagtaagaaggtaactccggcgagtgaaatccct
aaactaggaccttctgttacttcatcacctattttgcctccagtatccagtagatttaaa
aggaggaccagctctcctcccagttctccgcagcacagtccagtacttcgagactttgtt
aaatcgggtgagggaaaaactgtgtggaatgataatattcggagttcaaaaatgccaaag
ttggaaagccacagcaactcacctgcttggagcttgactggaagggaggagaaagagact
ttgagccctctttgctttgaagactataaattatcaaaagactggacagcagctccggct
tttggcagcgtgtgcaaccagcagccactggatttgtctagtggtgtgaaacaaaggtct
gatgccaaaaataagaatcaggttccctgggaatctgttttagatttaagcgtgcataag
aagccttgcagtgatgctgaaattcgggaatataaagaaaattccatacagccaacctgt
agtggtgttaaaaagaagaaaccgaccacttgcatgttacagaaagttctgctgaacgag
tataacggaacagatgccgccccagacagcaccctgagtgtaaacagtagtgagagccca
agcaaatccttggagcctccagcagaacctgacatggatcccagtttatcagcatcatct
tctcttgacactcagccccttagttcctccgtttcccctgtgccacaggcatctactgta
cctgtcgtgtgccagctgcctcctttgttaataccaaccaatcctccttccccaccaccc
tgccctcctgtgttaacagttgcttcatcacctcctccccttcttccaacaatgccgtta
ccaactccagatgtctctgccagtgctactaacacttcttcctgtccatccccactgtct
aacacgactacgcagtccccgctaccggttctttcacctacggtttctccttctccgtct
cccgttccttctgttgagccccttatttctgctgcttcacctggtccacctacgctctct
tcttcgtcttcctcctcctcgtcctcctctttctcctcctcttcatcttcttcatctccc
tctccacctcctctttctgtagtttcttctgttgtttcctctgctgataaccttgaaaat
actctcccaataataaaacaggaagaaccggaaaatgagcaacagaaagcaagagaagat
cctcatacttcaagtgaatcaggagtagtgcaggaaacgttcaataaaagctttgtgtgc
aatgtctgtgagtcaccttttctttctattaaagacctaacgaagcatttatccattcat
gctgaagaatggcccttcaaatgtgaattctgtgtacagctttttagggataaaacagac
ttgtcggaacatcgctttctgcttcatggagtaggaaatatctttgtttgctcggtctgt
aaaaaggaatttgcttttttgtgcaatttgcaacagcatcagcgggatctccatccagac
aaagcgtgcacacatcatgagtttgaaagtgggactttgagaccccagaattttactgac
cccagtaaggcgaacgcggaacacatgcagagcctgccagaagattctttggaaccttct
aaagaggaggaagacgaagatctaaacgattcctctgaagagctttatactactataaaa
ataatggcatctggagtaaaatctaaagatccagatgttcgtatgggcctcaatcaacac
tacccaagctttaagccacctccatttcagtatcaccatcgtaatcctatgggtattgga
gttactgcaacgaacttcactacccacaatattccacagacttttactactgccattcga
tgcacaaaatgtggcaaaagcgttgataacatgcccgagttgcacaaacacatattggcc
tgcgcgtccgccagtgataaaaagagatacacgcctaaaaaaaatccagtaccactgaaa
cagacggtgcagccgaagaatggcctagtggttatagctggcccaggaaagaatgccttc
agacgaatgggtcagcctaaaagacttaatttcaatgttgagattagcaaaatgtcctca
aataaactaaaaataagtgcattgaaaaagaaaaaccagctcgttcagaaagctatcttg
caaaaaaagaagtctgcccagcagaaggcagaactgaaaaataatccgtccgagtcagac
tctcacatctgcccctactgtaacagagagtttacttacattggaagtttgaataagcac
gcgtcatacagctgtcccaaaaaacccatctctccttcctctaaaaagaattcttccaaa
aaaagtgtaagttcttcacctgcgagcagtgaaaaaggcagcaaccagcgccggcgaaca
gcagatgcggaaatcaaaatgcaaagcatgcagcctcacctgggcaagactagagcacgg
acctcaggacccgcacaaatccagcatccttctgcatcctttaaatcgaaacaaaatgtt
aaatttgtaccttccatgcgatccaaaaagccaaattcatcttcgtccttgaggaactct
agtcctgtaagagtgtccagaatgtcccacgttgatgggaaaaaaactaaggggatcact
aagaacaattcctctggaatgtcgagcaaagcatcccggaaattgcacgtcagaatacaa
aggaataataaagctgttttgccaagtaagtctgcggtggcgagtaagaaaaaggcagac
aggtttgctgcgaaatctagagagaggatcgggggacctatcacacgaagcctgcagcag
gcagcaaacgcagaggcagcagaaagcaaaagagatgaaagcagtacaaagcaagaacta
aaagatttcaggaatctcctgtaa
DBGET
integrated database retrieval system
