Cuculus canorus (common cuckoo): 104062170
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Entry
104062170 CDS
T08597
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cuca03016
]
104062170 (CDKAL1)
Enzymes [BR:
cuca01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
104062170 (CDKAL1)
Transfer RNA biogenesis [BR:
cuca03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
104062170 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Styelin
Motif
Other DBs
NCBI-GeneID:
104062170
NCBI-ProteinID:
XP_009562497
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All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MPAACDSVLEDIEDIVSAEDLKPHDREFVRKNVFPKVRKRNSQKNIQTDDDPPSDSIIPG
AQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSDEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQDYLKGLSVIGVLQIDRVVELVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVNRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVDAIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVEQYRFPSLFINQFYPRPGTPAAKMHQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVYTASITRPLAKGEVSGLTEVFRHEPQNGTNWKARSSAEIPVKTSF
SLWMALQLPWQQGGGLKILSVSLALLAVLVMFYCGGLKAGL
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgattcagtgcttgaagatattgaagatattgtgtcagcagaagat
ttgaagccacatgatcgggagtttgtaagaaagaatgtttttccaaaagtgcgaaagcgc
aattcacaaaaaaacattcagacagatgatgatcccccaagtgacagcattattcccggt
gctcagaaaatctggattcgtacatgggggtgttctcacaataattcagatggtgaatat
atggctggacagctggctgcatatggatacaaaattacagacaactctgatgaagcagat
ctatggttgctgaatagttgtacagtaaaaaatcctgctgaggaccacttcagaaactca
atcaagaaagcccaagaagggaagaagaaagtggttctagcaggctgtgtgccacaagcg
caacctcgtcaggactacttgaaaggcttgagtgttataggggttctgcaaatagatcgt
gtagtagaacttgtggaggaaactattaaaggtcattcagtgagactgctgggtcagaaa
aaggataatggaaagcgtttggggggagcacgactggatttgccaaagattaggaagaat
ccactgatagaaatcatttccatcaatacagggtgtctcaatgcatgtacttactgcaaa
actaagcatgccagaggagatctagcaagttatccaattgaagaactagtgaatagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccctacacttttgtggaagctggttgatgctatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggcaaagattctcaatcatccaagagtatatgcttttctccacataccagtc
cagtcagcttctgacagcgtactaatggacatgaaaagagaatactgtgtggcagacttc
aaacaagtagtggatttcctgaaagaaaaagtgcctggaataacaattgctacagacatc
atctgtggtttcccaggagagacagatgaagattttcaagaaacaatgaaacttgtagaa
cagtacagatttccaagtttgtttattaaccaattttacccacgcccaggaaccccagct
gcaaaaatgcatcaagttccagctgcagtgaaaaaacagagaacaaaggatctgtcccag
ctgtttcattcatacaatccatatgatcacaaggttggtgagaggcagagagttctggta
acagaagaatcctttgattccaattactatgttgctcacaatcctttctatgagcaggtt
cttgtgccaaaggatcctctgctaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacatttcatgaaggggcagccagtgtcagatgccagagtttacactgcatccatc
accagaccattagcaaaaggagaagtttctggtttaacagaggtattcagacatgaacca
cagaatggcacaaactggaaagcacgctcttctgccgagatcccagtgaaaacatcattc
agcttgtggatggctttgcagctgccatggcaacaaggaggtggattgaagatactgtct
gtcagcctggctctactggcagttcttgttatgttttactgtggaggattgaaagctgga
ctgtga
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