Cheilinus undulatus (humphead wrasse): 121516233
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Entry
121516233 CDS
T07473
Symbol
polr1a
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121516233 (polr1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121516233 (polr1a)
Enzymes [BR:
cud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121516233 (polr1a)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
121516233 (polr1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-GeneID:
121516233
NCBI-ProteinID:
XP_041653326
LinkDB
All DBs
Position
10:complement(5..28097)
Genome browser
AA seq
961 aa
AA seq
DB search
MLFGKEVPWRRLEGMSFGMYSSEEIRKLSVKAVTNSRFLDAVGNVAPNSLYDLALGPADN
KEVCSTCCQDFNTCPGHLGHVELPLPVYNPLLFDKLYLLIRGSCLSCHMLTCSRASIHLL
LNQLKLLDHGAMQEVYHIEGVLNQHLEENPKATGDEIEQILRDFTDGIIGGSTKSSDSIR
PIKHLVEKKGSLINDFWKIQMKTRKCPYCRSGRFTLRREHNSKLIVTMPSGAQTLGNTDD
ELMAGKRVYLTASTAREHTNNLWEKEGFFLKCLFSGLEEGMVSQEGGRGFYPDLFFLELL
VVPPSRYRPINRLGDQMFTNGQTVNMQAVMKDCEIIRKLLALIAGEKTSQEEAPEQTDQT
FLTGIPGLTLTDKLYNIWIRLQTHVNIVFDSEMDKMMAEKYPGIRQILEKKDGLFRKHMM
GKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNAKELRQAVINGPNVHPG
ASMVINEDGRKTILSASSLAQREAVAKQLLTPSPGPQKMPMKIVNRHIKNGDVLLLNRQP
TLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLVST
DQQYLVPKDGKPLAGLIQDHMVSGTRMTIRGCFFTRDQYMELVYRGLTDKPGRVRLLPPA
IFKPQPLWTGKQVVSTLLLNVIPQDAVPLNLVGKSKIPGKAWIQAPPRVAPGYRPDSMCD
SQVVIRDGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTAYLQLYRG
FTLGVEDILVRPGANRQRRKIIQESLKIGTKALQVAFNLPPNVDQAEARSRWQDAHLNPD
QRDFSMADHKFKEVANQVNNDINKVCMPIGLHTSFPNNNLQLMVQSGAKGSTVNTMQISC
LLGQIELEGRRPPLMPSGKSLPCFQPYDPSPGAGGFVSGRFLTGIKPQEFFFHCMAGREG
L
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcggtaaggaggtgccatggcgccgactggaggggatgtcgttcgggatgtac
tcctccgaggagatccggaagctgagtgtgaaggcggtcactaactccaggttcctggat
gccgttgggaacgtggcccctaacagcctttacgacctggccctgggaccggccgacaac
aaagaggtgtgttcgacctgctgtcaggacttcaacacctgtccaggacacctgggacac
gtagagctgcccctccccgtctataaccccctgctgtttgataaactctacctgctgatc
agaggctcctgcctctcctgccacatgctgacgtgttctcgagcttccatccacctgctg
ctgaaccagctgaagctgttggaccatggagccatgcaggaggtctaccacatagaaggg
gtcctcaaccagcacctggaggagaatcctaaggcgacaggagacgagatcgagcagata
ctccgagatttcacagacgggatcattggagggagcactaagagttcagacagcatcaga
ccgattaaacacctggtggagaagaagggcagtctgatcaatgacttctggaagatccag
atgaagaccaggaagtgtccgtactgcaggagtgggaggttcacgctgcggcgagaacac
aacagtaaactgatcgtcaccatgccttcaggagcgcagaccctcggaaacactgacgat
gaactgatggccgggaagagagtctacctgaccgccagcactgccagagaacacaccaac
aatctgtgggagaaagaagggttcttcctgaagtgtctgttctctggcctggaggagggg
atggtgtctcaggaggggggcagaggtttctatccagacctcttcttcctggagctgctg
gtggtcccaccgtccaggtaccgtccaatcaatcggctcggtgaccagatgttcaccaac
ggtcagacggtcaacatgcaggccgtcatgaaggactgtgagatcatccggaaacttctg
gctctcatcgctggagagaaaacatctcaggaggaggctccagaacaaacagaccagacc
tttctgaccgggatccccggcctcacgctaacagataaactctacaacatctggatccgc
ctgcagacccacgtgaacatcgtctttgacagcgagatggacaaaatgatggcggagaag
tacccaggaatcagacagatcttggagaagaaggatggattgttccggaaacacatgatg
ggaaaaagagtggactacgctgctcggtctgtcatctgcccggacatgtacatcgggacg
aacgagatcggaatccccatggtgtttgccaccaagctcacctaccctcagcccgtcacg
ccctggaacgcgaaggagctccggcaggccgtcattaacgggccaaacgtccatcccgga
gcttccatggtgatcaacgaggacggcaggaagaccatcctgtcagccagcagtctggca
cagagggaggccgtagctaagcagctgctgacccccagtcctggtcctcagaagatgccc
atgaagattgtgaaccgtcacataaagaacggagacgttctgctgttaaacagacagccg
accctgcacagaccctccatccaggcccactgtgcccggatcctcccaggagagaaggtt
ctacggctccactacgccaactgtaaggcgtacaacgccgactttgacggagacgaaatg
aacgcacacttccctcagagcgagctgggccgagcggaggcctacaccctagtcagcacc
gaccagcagtacctggtccctaaggatgggaaacctttagcggggctgatccaggaccac
atggtctcaggaacacggatgaccatacgaggctgtttcttcaccagagaccagtacatg
gagctggtctaccgaggactgaccgacaaaccggggcgggtccgactgctgcctccggcc
atcttcaaacctcagccgctgtggaccgggaagcaggtcgtctccacgctgctgctgaac
gtgatcccacaggacgccgtgcctctaaacctggttggtaaatccaagatccccggtaaa
gcctggatccaggcccctccccgagtggctccaggatacagacctgacagcatgtgtgac
tcacaggtggtgatccgggatggcgagctgttggtgggcgtcctggataaggctcactac
ggctcctcggcctacggtctggttcactgctgctatgagctctacggaggagagaccagc
gggaaactgctcagctgtctggctcgactcttcaccgcctacctgcagctctaccgaggt
tttactctgggtgttgaggatattttagtccgaccaggagccaacagacagaggaggaag
atcatccaggagtctctgaagatcggcactaaagccctgcaggtggccttcaacctgccc
cccaatgtggaccaagctgaggcccggagccgctggcaggacgcccacctgaacccagac
cagagagacttcagcatggccgaccacaagtttaaggaagtggccaaccaagtcaacaac
gacatcaacaaggtgtgcatgcccatcggactccacacgtctttccccaacaacaacctg
cagctgatggtccaatcaggagccaaggggtctacggtcaacaccatgcagatttcctgt
ctgctgggtcagatcgagttggagggccgcaggcctccactaatgccttctgggaaatcc
ttgccatgcttccagccgtacgacccttcacccggggcggggggtttcgtctcaggacgg
ttcctcacaggaatcaaaccacaggagtttttcttccactgcatggcgggcagagaggga
ttg
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