Cheilinus undulatus (humphead wrasse): 121516478
Help
Entry
121516478 CDS
T07473
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04010
MAPK signaling pathway
cud04210
Apoptosis
cud04218
Cellular senescence
cud04620
Toll-like receptor signaling pathway
cud04621
NOD-like receptor signaling pathway
cud04622
RIG-I-like receptor signaling pathway
cud04623
Cytosolic DNA-sensing pathway
cud04625
C-type lectin receptor signaling pathway
cud04920
Adipocytokine signaling pathway
cud05132
Salmonella infection
cud05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121516478 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121516478 (nfkb1)
04218 Cellular senescence
121516478 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
121516478 (nfkb1)
04621 NOD-like receptor signaling pathway
121516478 (nfkb1)
04622 RIG-I-like receptor signaling pathway
121516478 (nfkb1)
04623 Cytosolic DNA-sensing pathway
121516478 (nfkb1)
04625 C-type lectin receptor signaling pathway
121516478 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
121516478 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121516478 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
121516478 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cud03000
]
121516478 (nfkb1)
Transcription factors [BR:
cud03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
121516478 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
121516478
NCBI-ProteinID:
XP_041653722
LinkDB
All DBs
Position
10:complement(48584773..48628187)
Genome browser
AA seq
932 aa
AA seq
DB search
MAGDDHYLHPSNQIFDNLMMDPSWEFTHFPVMSQNTSLHTVDGPFLQIVEQPKQRGFRFR
YGCEGPSHGGLPGASSEKNRKTYPTVKISNYQGPARVVVQLVTALTPHPQLHAHSLVGKQ
CDKGICMADLQPKDSTISFPNLGILHVTKKNVAKTLEERMMEAYRMGHNGGVSIHPEIDA
LQGEVRGPRELTDHQRSVISSAAAVQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSD
PIYDSKAPNASNLKIVRMDRTAGCVSGGEEVYLLCDKVQKDDIQVRFYEEDESGLTWEAL
GDFSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKE
EVQRKRQKTLPNFQDFSGHGGGSLYRGGGGGPAAGGGPGSAGGGGYFQGFNTYNTYGGGG
GGGGYSTGYSGGLGGGGGGMKHGGSVSQGEAADDSGDDSDPDNDSGSGAMLRLSTQTDSP
EVRERMEEGGASEEPEPEREKRLFEETSRQLQALFQYSVTGDSAYLLAPQRPLMDAQDED
GDTGLHLAVLHSQQEALKSLAQVVSALPGEEVLNMRNHLYQTPLHLAVITQQRETVEALL
LAGADPTLTDRHGNTVLHLASQLEGGGMVRFLLQQRELRGLLEHANTAGLCAIHLAILSN
QLSSLRELLEGGANVEAQERSCGRTALHLATEADNVSLAGCLLLEGNAKVDSCTFNGSTP
LHIAAGRSSVKLTALLMAAGADPHRENFEPLFFRDNDCCDEERDEEEEDEGYIPGTTPLN
MAANTQVLELLNGKEYKPKTPQRDFSPTQSDLSSLDMEVRQEVCRSLESEGCWENLAHSL
GLGILNTAFRLSPSPAKTLLDSYEVSGGTVSDLLAGLRSVGECRALSILEEALGCHDNHV
ATGALSACVQDLKVDVQIDSGVCDSGVELSTA
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctggagacgaccactacctccatccttcaaaccagatttttgataatttaatgatg
gatccttcgtgggagttcacacattttcctgtgatgtctcagaacacgtcactgcacaca
gtggatggaccgttcctgcagatcgtggagcagccaaagcagcgtggtttcaggttcagg
tacggctgtgagggtccatctcatggcggtctgcccggtgcctccagtgagaagaacagg
aagacctaccccactgtcaagatcagtaactaccaaggtccggcccgggtggtggtccag
ctggtcacggcattgaccccccacccccagcttcatgctcacagtctggtggggaaacag
tgtgataaagggatctgtatggctgacttacagcccaaagactcaactatcagtttccct
aacctcggcatcctccatgtgacgaagaagaacgtagccaagactctggaggagaggatg
atggaggcctacaggatgggacacaacggtggagtctccatccaccctgagatcgacgcc
ctgcagggggaagtccgaggaccacgagagctcacagaccaccagcgcagtgtgatcagc
tcggcggcggctgttcaggccaaagaaatggacctcagtgtagttcgcctcatgttcacg
gcgttcctccccgacagtgacggcggcttctcccgacggctcgagcccgtcgtgtctgac
ccgatctacgacagcaaggctccaaacgcgtccaacctgaagatcgtgaggatggatcga
acagctggctgtgtgagtggtggagaggaagtctacctactctgtgacaaagtccaaaaa
gacgacatccaggttcgcttttatgaagaagatgagtctgggttgacctgggaggctttg
ggagatttctcccctacagatgttcacagacagttcgccatcgtattcaagactccaaag
taccgagaccagaaccttcagaaaccaacgtcagtgttcgtccagctcaagaggaagtcc
gacaacgagaccagcgagcccaaacccttcacctaccacccacagatcatagataaggag
gaggtgcagaggaagagacagaagacgttaccgaacttccaggacttcagcgggcacgga
ggaggaagtctgtaccgaggaggaggaggaggacctgccgcaggaggaggaccaggctct
gccggaggaggaggttactttcaaggcttcaacacctacaacacctatggaggaggggga
ggaggaggaggttactctacaggttactcaggtggtctgggaggaggaggaggaggcatg
aaacacggcgggagtgtctctcagggcgaagcagcggacgacagcggtgacgacagcgat
cccgacaatgactcagggtcgggggcgatgctaagactttcgacccaaacagacagccca
gaggtcagggagaggatggaagagggaggggccagtgaggagccggagccagaaagagaa
aagcgtctgtttgaggagaccagcagacagctgcaggctctctttcagtactcagttact
ggagattcagcgtacctcctggctccacagcgccccctgatggatgcccaggacgaggat
ggagacactgggctccatctagcagttctccacagccagcaggaggcgctgaagagtctg
gcccaagtcgtctctgctctgccgggcgaggaggtgctcaacatgaggaaccatctttac
cagactcctttgcacctggccgtgatcacccagcagagggagacggtggaagcgctgcta
ttggccggcgccgaccctacgcttacagatcgtcatggcaacacggttctccacctggcg
tcccagctggagggcggagggatggtccgttttttactgcaacaacgagagctgagaggg
ctgctggagcacgccaacacagcgggtctgtgtgccatccacctggccattctgtccaat
cagctgtcttctctcagggagctcctggaaggcggggctaacgtggaagctcaggaacgc
agctgtggacggaccgccctccacctcgccaccgaggcagacaacgtgtctttggccgga
tgcctgctgctggagggtaacgccaaggtggacagctgcacctttaacggctccaccccc
ctccacatcgcagcggggcggagctctgtcaaactaacagctctcctcatggctgcaggt
gccgaccctcacagagagaactttgagccattgttcttcagagacaatgactgctgtgat
gaggagagggatgaggaggaggaagatgaaggctacatcccaggaacgactcccctcaac
atggctgccaacacgcaggtgttggagctgctgaatgggaaagagtacaaaccaaaaact
cctcagagagacttcagccctactcaaagcgacttgtcgagtctggacatggaggtgaga
caggaagtgtgtcgctctctggagagtgaaggatgctgggagaatctggctcacagtctg
ggtctggggatcctgaacacagccttcagactgagcccgtcccctgcgaaaacactgctg
gacagctacgaggtctcaggtgggaccgtcagcgaccttctggctggtctgaggtcagtt
ggggagtgcagagcactgagtatccttgaggaggcgctgggctgccatgataaccatgtg
gcaactggggctctgagcgcttgtgttcaggacctgaaggtggacgttcagattgacagc
ggggtctgtgacagcggggtggagctctctacggcatga
DBGET
integrated database retrieval system
