Cheilinus undulatus (humphead wrasse): 121528319
Help
Entry
121528319 CDS
T07473
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03020
RNA polymerase
cud04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
121528319 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
121528319 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121528319 (polr3a)
Enzymes [BR:
cud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
121528319 (polr3a)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
121528319 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
121528319
NCBI-ProteinID:
XP_041671640
LinkDB
All DBs
Position
20:complement(26952517..27013330)
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLSKE
EKLQFMDYLKRPNLAYLQKRGLKKKISDKCRKRTVCLNCAAFNGPVKKCGLLKIIHEKYK
TTKKVVDPFVSEFMQSFDTAIEHNKVMEPLLTRAQENLNPLVVLNLFKRIPQEDVPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLELMRKLVRNGPNVHPGANF
IQHRHGQMKRFLKYGNREKMAQELRFGDVVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGKDEKVRISLPRPAIIKPMALWTGKQI
FSVILKPSKDCPVNANLRTKGKQYCGKGEDLCHNDSFVVIHNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVFLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YKKCDDYIEALQTGKLQQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYD
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYTCQDEPALSQNELVLTADSIMKKADFMC
CRDSFLEELTETGSEKYLEEIKKFIKSISERIKKTRDKYGINDNGTSEPKVLYQLDRITP
TQLERFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVARAVIHIDEQSGKNKYKLLVEGDNMRAVMATHGVNGSRTTS
NNTYEVERTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
DPSPVKRPLLFDSPDFHVPLIR
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttcagagagacagatgtggcgaagaaaataagccacatctgcttt
ggtatgaaatctgcggagcagatgcgccaacaggctcacatccaggtggtgagtaagaat
ctgtacagtcaggacaccaaacatactccactgccctatggagtgttggaccatcgaatg
gggaccagtgagaaggacagaccctgtctgacatgtgggaagaatctggcagattgtttg
ggacattatggctatttggacctggagctgccatgttttcatgttggatatttcaaagct
attataggaatcttacagatgatctgtaagacctgctcgagcatcatgctgtctaaggag
gagaaattgcagttcatggattatttgaaacgacccaacctggcgtacctccagaagcgc
gggttgaagaagaaaatctctgataaatgccggaaaaggacagtctgtctaaattgtgcc
gccttcaatggtcctgtgaagaaatgcggcctgctaaagataatccacgagaaatataaa
acgaccaagaaggtggtggatccttttgtgtccgagttcatgcagtcctttgatacggcc
atcgagcacaacaaagtgatggagcccctgttgaccagagcccaggagaatctgaatcct
ctggtggtgctgaacttgtttaagaggatcccccaggaagatgtccctctgctgctcatg
aacccagaggctgggaaacctgcggacctcatcctcacccgcctcctggtgcctcccctc
tgcatacgcccgtctgtggtcagcgacctgaagtcaggcaccaacgaggacgacctgacc
atgaagctcactgagataatcttcctcaacgatgtcatcaaaaagcatcgtatgactggg
gcaaagactcagatgatcatggaggattgggacttcctgcagctgcagtgcgctctttat
atcaacagcgagctctctggcatcccgctcaacatggcacctaagaagtggacccgaggc
tttgtgcagagactcaaggggaagcaaggtcgattcagaggaaacctctcagggaaaaga
gtggatttctctggaagaaccgtcatttctcccgacccaaacctgaggatcgatgaggtg
gccgtccctgtgcatgtggccaaaattctcacgtacccagagaaggtgaacaaagccaat
ctggagcttatgaggaaactcgtacgaaacggtcctaatgttcacccaggagcaaacttc
atccaacatcgtcacggtcagatgaaaaggtttttgaaatatggaaaccgtgagaagatg
gcacaggagctgaggttcggtgatgtggtggaaaggcacctgatagatggagacattgtc
cttttcaatcgacagccatctcttcataaactcagcatcatggcccacatcgctagagtc
aaacctcacaggacgttcaggtttaacgagtgtgtgtgcaccccgtacaatgccgacttt
gatggggacgaaatgaatcttcatctacctcagacagaagaagccaaagctgaggccctt
gtcctaatggggacaaaagctaatctcgtcactccgagaaacggtgaacctctgattgct
gctattcaggactttctgacaggggcctacctcttgaccctgaaggacaccttctttgac
agatcaaaagcctgtcagattgtggcctcaatcctggtgggcaaagatgaaaaagtcaga
atctctctgccccgccccgctatcattaagcccatggctctgtggacgggcaaacagatc
ttcagcgtcatcctgaagccgagtaaagactgtccagtcaatgcgaacctccggaccaaa
ggcaaacagtactgcgggaagggagaggatctctgccacaatgactccttcgtggtgatt
cacaacagtgagctcatgtgtggcagcatggacaagggcaccttgggatctggatccaag
aacaacatcttctacatcctactgagagactggggacagctagaggccgcaaacgccatg
tcacgcctggcgagacttgctccagttttcctgtccaatcggggcttttccattggaatt
ggtgatgtcacacctggtcagggtcttctcaaggccaaacaggacttgctggatgatggt
tacaagaagtgtgatgattacattgaagcactacagacaggcaagctgcagcagcaacca
ggctgcacagcagaggagactctagaggctcttatcctgagagagctgtctgtcattaga
gacagagctggtagtgcctgcctacgagaacttgacaaaagcaacagccctctcatcatg
gctctgtgtggctccaagggatctttcatcaatatctctcagatgattgcctgcgtggga
cagcaggccataagtggctctcgagtgcctgatggcttcgagaatcggtccctgcctcat
tttgaaaagcactcaaaacttccagctgcaaaaggctttgtggctgacagcttctatgac
ggcctgacgcccacagagttcttcttccacaccatggccggtcgggagggtctggtggac
actgcggtgaaaactgctgagacgggatacatgcagaggcgtctggtgaagtccttagag
gatctgtgctcacagtacgacctgacagtccgcagctccacaggggacatcatccaattt
atttatggtggggacggtctggaccccgctgctatggaggggaaggatgagccgctggag
tttaagagagtcctggacaacatccgggctgtctacacatgtcaagacgagcctgcactc
agccaaaatgagcttgtcctcactgcagacagcatcatgaagaaagcggacttcatgtgc
tgcagagacagcttcctggaggagttaactgaaacaggctcagagaagtacctggaggag
ataaagaaattcatcaaaagcatctctgaaaggatcaagaagaccagagacaaatatggc
atcaacgacaacggcaccagcgagccaaaagttctctatcagctggaccgcataaccccc
acccagctggagaggtttcttgaaacctgcagagacaagtacatgagagctcagatggag
cctggctcggccgtaggagctctttgtgcccagagcatcggtgagcctggtactcagatg
accctgaaaaccttccactttgccggtgtcgcatccatgaacatcacactgggggttcct
cgcatcaaagaaattattaatgcctcaaaaaacatcagcacgcctattatcacagctcat
ttggatgtggaggatgacgctgactttgcgaggctggtgaaaggaaggatcgagaaaact
ttattgggagagatttctgagtacattgaagaggtttttctacctgacgactgcttcatt
ctggttaaattgtccttggagaggatcaggctgcttcgactggaggtaaatgcagaaact
gttcgctactccatctgcatgtccaaactgagagtgaagccgggagacatcgccgtgcac
ggcgaggcggtggtgtgcgtgtctccacgtgagaacagcaaaagctccatgtactacgtg
ctgcagtcactgaaagaagaacttcccaaggtggtggttcaaggaatacccgaggtcgcc
cgagccgtcatccacattgatgagcagagtggcaagaacaagtacaaactcttggtggag
ggggacaatatgagagctgtcatggcaacacatggagtgaatggcagcaggaccacttca
aacaacacatacgaggttgagaggactttgggtattgaagctgctagatccactatcatc
aatgagatccaatacaccatggtaaaccacggaatgagcattgaccggcgtcacgtcatg
ctgctggcagatctcatgtcctacaagggggagattctgggcatcaccaggttcggttta
gccaaaatgaaggagagcgtcctcatgctggcctccttcgagaaaacagctgatcatctc
ttcgatgccgcctactttggccaaaaagactcagtctgcggtgtgtctgagtgcatcatt
atggggatcccgatgaacattggaacaggactgtttaaactcctacacaaagcggacaag
gatccctccccagtcaaaaggcctcttctgttcgacagcccagactttcatgttcctctt
attaggtag
DBGET
integrated database retrieval system
