Cupriavidus sp. KK10: KB879_04305
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Entry
KB879_04305 CDS
T08941
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cuk
Cupriavidus sp. KK10
Pathway
cuk00540
Lipopolysaccharide biosynthesis
cuk01100
Metabolic pathways
cuk01250
Biosynthesis of nucleotide sugars
Module
cuk_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cuk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KB879_04305 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cuk01005
]
KB879_04305 (rfaD)
Enzymes [BR:
cuk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KB879_04305 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cuk01005
]
Core region
KB879_04305 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
KR
LAMININ_IV_B
BCNT
Motif
Other DBs
NCBI-ProteinID:
QUN29191
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All DBs
Position
878510..879505
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AA seq
331 aa
AA seq
DB search
MTIIVTGAAGFIGSNLVKGLNDRGETNVIAVDNLTRADKFHNLVDCEISDYLDKQDFLAR
LARGEFGKVRAVFHEGACSDTMETDGRYMMENNYRYTLSLMESCLEQGTQFLYASSAATY
GASQVFREDREFERPLNVYGYSKFLFDQIVRRRLPSALSQIVGFRYFNVYGPRETHKGRM
ASVAFHNFNQFRADGTVKLFGEYGGYAPGMQSRDFVSVEDVVKVNLHFFDHPDKSGIFNL
GTGRAQPFNDIAATVVNTLREAEGKPRLSLEELVQEGLLEYVKFPDALRGKYQCFTQSDV
SKLRSAGYSEPFLSVEEGVARYCRWLIERAG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcatcgtcaccggcgccgctggctttatcggcagcaacctcgtcaagggtctg
aacgaccgcggcgaaaccaacgtcatcgccgtcgataacctgacccgtgccgacaagttc
cacaacctggtcgactgcgagatctccgactaccttgacaagcaggacttcctcgcgcgc
ttagcccgcggcgagttcggcaaggtgcgggcggtattccatgaaggcgcgtgctccgac
accatggagaccgacggccgctacatgatggagaacaactaccgttacacgctgtcgctg
atggagagctgcctggaacaaggcacgcagttcctgtacgcgtcgtcggcggccacctac
ggcgcctcgcaggtgttccgcgaagaccgcgagttcgagcgcccgctgaacgtgtacggc
tactccaagttcctgttcgaccagatcgtgcggcgccggctgccgtcggcgctgtcgcag
atcgtgggcttccgctacttcaacgtgtacggcccgcgtgaaacgcacaagggccgcatg
gcctcggttgccttccacaacttcaaccagttccgcgccgacggcacggtgaagctgttc
ggcgagtacggcggctatgcccccggcatgcagagccgcgacttcgtctcggtcgaggac
gtggtcaaggtcaacctgcacttctttgaccatccggacaagtccggcatcttcaacctc
ggcaccggccgcgcgcagccgttcaacgacatcgccgccaccgtggtcaacaccctgcgc
gaggccgaaggcaagccgcgcctgtcgctggaagaactggtgcaggaaggcctgctcgag
tacgtcaagttccccgatgcgctgcgcggcaagtaccagtgctttacgcagtcggatgtg
tcgaagctgcgcagcgccggctacagcgagcccttcctgtccgtcgaggaaggcgtggcg
cgctactgccgctggctgatcgaacgcgccggctga
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