Corynebacterium variabile: CVAR_2979
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Entry
CVAR_2979 CDS
T01594
Symbol
gadB
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
cva
Corynebacterium variabile
Pathway
cva00250
Alanine, aspartate and glutamate metabolism
cva00410
beta-Alanine metabolism
cva00430
Taurine and hypotaurine metabolism
cva00650
Butanoate metabolism
cva01100
Metabolic pathways
cva01110
Biosynthesis of secondary metabolites
cva01120
Microbial metabolism in diverse environments
cva02024
Quorum sensing
Module
cva_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
cva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CVAR_2979 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CVAR_2979 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CVAR_2979 (gadB)
00430 Taurine and hypotaurine metabolism
CVAR_2979 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CVAR_2979 (gadB)
Enzymes [BR:
cva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
CVAR_2979 (gadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AEK38321
UniProt:
G0HI59
LinkDB
All DBs
Position
complement(3362573..3363967)
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AA seq
464 aa
AA seq
DB search
MSDLELNPLFARTDEATSFPRHRIPEAGSLPETAYQLIHDEAMLDGNARMNLATFVGTWM
DDHANRLYSEAFDKNMIDKDEYPATAEIEDRCWRMIARLWNAPDPDHTMGTSTVGSSEAC
MFGGLALKRRWQHRRRAAGESTERPNIVLSSAVQVCWEKFCNYFDVEPRYVPVSEEHRVL
DGHDLDSYVDENTIGVVAILGVTYTGMYEPVAAIAAALDEIEDRRGLDIRIHVDAASGGM
IAPFLQPDLEWDFRLPRVASINTSGHKYGLVYPGLGWIVWRTQEDLPEDLVFRVSYLGGD
MPTLALNFSRPGAQVLLQYYLFLQLGMDGYRRVQGTTMEVARYLAGEIGKMPDFELWSED
LDIPVFAWRLAGEDAWGDARRERKWTLYDLSDRLRMHGWQVPAYPMPDDLSDVTVQRIVV
RNGMSHDLATLFVRDLRTCVRYLDGLDAPLPSTADGGQGTGFHH
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcgaactcaacccgctgttcgcccgcaccgacgaggcgaccagtttcccg
cgtcaccgcatcccggaggccggcagcctgccggagaccgcgtaccagctcatccacgat
gaggcgatgctcgacggcaacgctcggatgaacctcgccaccttcgtcggcacgtggatg
gacgaccacgcgaaccggctgtacagcgaggccttcgacaagaacatgatcgacaaggac
gagtaccccgccaccgcggagatcgaggaccgctgctggcggatgatcgcccggctgtgg
aacgcacccgatcctgaccacaccatgggcacctccaccgtcgggtcctcggaggcgtgc
atgttcggtggcctggcgctgaagcggcggtggcagcaccggcgtcgcgcggcgggggaa
tccaccgagcggccgaatatcgtgctgtcctcggcggtgcaggtgtgctgggagaagttc
tgcaactacttcgacgtcgagccccgctacgtgccggtcagtgaggaacaccgcgtcctc
gacggtcatgacctggacagctacgtcgacgagaacaccatcggcgtggtcgcgatcctg
ggcgtgacctacaccggcatgtatgagccggtggccgcgatcgccgccgcgctcgacgag
atcgaggaccgacgtggcctggacatccggatccacgtggacgccgcgtccggcgggatg
atcgccccgttcctgcagccggacctggaatgggacttccggctgccacgggtggcctcg
atcaacacgtccgggcacaagtacggactcgtctacccggggctgggctggatcgtgtgg
cgcacgcaggaggatctgccggaggacctggtcttccgcgtcagctacctcggcggggac
atgccgacgctggccctgaacttctcccggccgggcgcgcaggtgctgctgcagtactac
ctgttcctgcagctggggatggacggctaccggcgggtgcagggcaccacgatggaggtg
gcgcggtacctcgccggcgagatcgggaagatgccggacttcgagctgtggagtgaggac
ctggacattccggtgttcgcgtggcggttggcgggggaggacgcgtggggtgacgcgcgc
cgggagcggaagtggacgctctacgatctctcggaccggctgcggatgcacggctggcag
gtaccggcgtaccccatgccggacgacctcagtgatgtgacggtgcagcgcatcgtcgtg
cgcaacgggatgagccacgacctggcgacgctgttcgtccgggacctgcgcacctgcgtg
cggtacctcgacgggctggatgcgccgttgccgtccactgctgacggtgggcaggggacg
gggttccatcactga
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