Carnobacterium viridans: LHA31_05655
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Entry
LHA31_05655 CDS
T08019
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
cvd
Carnobacterium viridans
Pathway
cvd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cvd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LHA31_05655 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvd03021
]
LHA31_05655 (rpoE)
03400 DNA repair and recombination proteins [BR:
cvd03400
]
LHA31_05655 (rpoE)
Transcription machinery [BR:
cvd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LHA31_05655 (rpoE)
DNA repair and recombination proteins [BR:
cvd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LHA31_05655 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
BUD22
Motif
Other DBs
NCBI-ProteinID:
UDE96180
LinkDB
All DBs
Position
complement(1145665..1146282)
Genome browser
AA seq
205 aa
AA seq
DB search
MKLTQFDGQNKNELSMIEVAHAILDQKGEILDFSALLKEVQEFLNINSKELANATSQFYT
DLNIDGSFISLGENRWGLRSWYPIDFIDEEVTQGNEDEAPRRKKRKKASAFVTGEDDIDY
NDDDPEDDDSPEEEEDDDATTYGGRVTVDDHGVMIDDEDKEDLGEYKADLSELGTDDEED
ELPDGVEGDLTIIEDEDEDDSEEEY
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattaacacaatttgacgggcaaaacaaaaatgaattgtcaatgattgaagtagct
catgccatcttagatcaaaaaggagagatccttgatttctcagctttactaaaagaagta
caagaatttttaaacataaactctaaagaacttgctaatgcaacttctcaattttataca
gacttaaatattgacggtagttttatttccttaggagaaaaccgttggggactacgttca
tggtatccaatcgattttatcgatgaagaagtaactcaaggaaatgaagatgaagctcca
cgtcgtaaaaaacgtaaaaaggctagcgcatttgttacaggggaagatgatattgattac
aatgatgatgatcctgaagacgatgattctcctgaagaggaagaagatgacgatgctact
acttacggtggtcgtgtaacggttgatgaccatggtgtaatgatcgacgatgaagacaaa
gaagatctaggcgaatacaaggcagatttatctgaattaggtaccgatgatgaagaagat
gaattgcctgacggtgttgaaggagatcttacaatcattgaagacgaagatgaggacgat
tctgaagaagagtattag
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