Charadrius vociferus (killdeer): 104282006
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Entry
104282006 CDS
T08577
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04020
Calcium signaling pathway
cvf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104282006 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104282006 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104282006 (GRIN2C)
Ion channels [BR:
cvf04040
]
Ligand-gated channels
Glutamate (ionotropic)
104282006 (GRIN2C)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
104282006
NCBI-ProteinID:
XP_009878380
LinkDB
All DBs
Position
Unknown
AA seq
992 aa
AA seq
DB search
MVLGCSAAFTDLLLPGPEEPVVNVAIVFGGTSYPLHIRSRLSPQSFLDMPLEIHPITVIV
NNTNPSTLLTQICNILASHKIHGIVFEDNVGTEAVAQILDFISSQTQVPVISISGGSAVV
LTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNIFLEVIRSFTDAS
YFGWELQEVLTFEMSQEQSSSRTQRLLRQIDAQVLIVYCSREEAEYLFTMAEQAGLVGPG
YIWIVPSLTVGNMEVPPSSFPVGLISVVTESWKLSLRQKVRDGVAIIAMGAASFFRAHGY
LPEVGRDCWAPTRATAANTSFYRHLLNVTWEHRDFSFNEGGYLVRPTMVVISLNQHRLWE
MVGKWEKGIIHMKYPVWPRYGSFLQPVADNRHLTVATLEERPFVIVENTDPSTGVCVRNT
VPCRKQTNSSQSGDGLVDPYTKLCCKGFCIDILKKLAKAVKFSYDLYLVTNGKHGKIVRG
VWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLE
PYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNQNLTSGKRPGGPTFTIGKSVWLLWAL
VFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDRKFQ
KPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTSLKMGKLDAFIYD
AAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLALLQFLGDGETQKL
ETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHSVPK
SHKLDFLLAISRGIYSCFSGVQTMASPGRAPTPDVTANSAQANVLKMLQAAKEMVSTASV
GGSLEQATRTIEDWSSHSERLQTTFSLRTPQLVVQNSTGAHRAPSYSTAPTERLGRAYAP
KGAPLGLTLPQPIPVDSRLPEMKPSRVFLTFW
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgggctgctcggctgccttcacggacctcctgctgccgggccctgaggagccg
gtggtcaacgtggccatagtgtttgggggcacgtcctacccactgcacatccgctcccgc
ctgagtccccagagcttcctggacatgcccctggagatccaccccatcacggtcatcgtc
aacaacaccaaccccagcaccctcctcacccagatctgcaacatcctcgccagccacaag
atccacggcattgtctttgaggacaacgtcggcacggaggccgtggcccagatccttgac
ttcatctcctcccagacccaggtccccgtcatcagcatcagcggggggtctgccgtggtc
ctgaccccgaaggaacccggctcagctttcctgcagttgggggtctccatcgagcagcaa
atccaggtgatcttcaaggtgctggaggaatacgactggggctcctttgctgtcatcacc
agcctctacccgggctacaacatcttcctggaagtcatccgctccttcacagacgccagc
tactttggctgggagctgcaggaggtgctcaccttcgagatgagccaggagcagagcagc
tccaggacgcagcggctcctgcggcagatcgatgcccaggtcctcattgtctactgctcg
cgggaggaggcggagtacctcttcaccatggcagagcaagccggtcttgtggggccgggc
tacatctggatcgtacccagccttacagtgggcaatatggaggtgccaccctcctccttc
cccgtcggcctcatcagcgtggtgacagagagctggaagctgagcctgcggcagaaggtg
cgggatggggtggccatcattgccatgggggcagctagcttcttccgggcccatggctac
ctcccggaggtgggacgggattgctgggcccccaccagggccactgccgccaacaccagc
ttctaccggcacctcctcaatgtgacgtgggagcacagggacttctccttcaatgaaggc
ggctacctggtcagacccaccatggtggtcatctcgctcaaccagcaccggctctgggag
atggtgggcaagtgggagaaaggcatcatccacatgaagtacccggtgtggccccgctac
ggctccttcctgcagcccgtggctgataaccgccacctgacagtggccacattggaggag
agaccctttgtcatcgtggagaacacggaccccagcaccggggtctgtgtgcgcaacact
gtgccctgccgcaagcaaaccaactcctcccagagtggcgatggcctcgtggatccctac
accaagctgtgctgcaagggcttctgcatcgacattctgaagaagctggccaaggcagtg
aagttctcctatgacctctacctggtgaccaatggcaaacacggcaagatcgtccgtggg
gtctggaacggcatgattggtgaggtgtattacaagcgcgcggacatggccatcggctcc
ctcaccatcaacgaggagcgctcggagatcgtggacttctccgtcccctttgtggagacg
ggcatcagcgtcatggtggccaggagcaacggcactgtctccccatccgccttcctggag
ccctatagcccagctgtctgggtcatgatgtttgtgatgtgcctcaccgtggtggctgtc
accgtcttcgtgttcgagtatttcagccccgttggctacaaccagaacctcaccagtggc
aagaggccaggaggtcccaccttcaccattggcaagtcggtgtggctgctgtgggctctg
gtcttcaacaactcggtgcccattgagaaccccaagggcaccaccagcaagatcatggtg
ctcatctgggccttctttgccgtcatcttcctcgccagctacactgccaacctggccgcc
ttcatgatccaggagcagtacatcgacaccgtgtcagggctgagtgacagaaagtttcag
aagccgcaggagcagtacccccccttccgctttggcaccgtccccaacggcagcaccgag
aggaacatccgcagcaactaccccgacatgcacacccacatggtgaagtacaaccagcgc
tccgtggaggacgccctcaccagcctcaaaatggggaagctggacgccttcatctatgat
gcagcggtgctcaactacatggcgggcaaggatgaaggctgcaagctggtgaccatcggc
agcggaaaggtgtttgccaccacgggctacggcattgccctgcagaaggactcacgttgg
aagcgagccatcgacctggccctgctccagttcctgggagacggtgagacccagaagctg
gagacagtttggctgtcggggatctgccagaatgagaagaacgaggtgatgagcagcaag
ctggacatcgacaacatggctggggttttctacatgctgctggtggccatggggctaagc
ctgctggtctttgcctgggagcaccttgtctactggaagctgcgtcactctgtccccaag
tcccacaagcttgacttcctcctggccatcagcaggggcatctacagctgcttcagtggg
gtgcagaccatggcgagccccgggcgggcgcccacgcccgacgtcaccgccaactcggcc
caggccaacgtgctgaagatgctgcaggcagccaaggagatggtgtcgaccgccagcgtg
ggtggttcgctggagcaggccacccgcaccatcgaggactggagtagccacagcgagcgc
ctccagaccaccttctccctgaggacaccccagctggtggtgcagaatagcaccggtgcc
caccgggccccctcctacagcacggcccccaccgagaggctggggagagcctacgctccc
aagggtgctcccctggggctgacactgccccagcccatccccgtggactcccggctgccc
gagatgaagccctcccgggttttcctcaccttctggtga
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