Charadrius vociferus (killdeer): 104285442
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Entry
104285442 CDS
T08577
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf00310
Lysine degradation
cvf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104285442 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104285442 (SETDB1)
Enzymes [BR:
cvf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
104285442 (SETDB1)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104285442 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
104285442 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
DUF4537
Motif
Other DBs
NCBI-GeneID:
104285442
NCBI-ProteinID:
XP_009882201
LinkDB
All DBs
Position
Unknown
AA seq
1321 aa
AA seq
DB search
MSGIPGCLSVVSGAAEMDSQEIKELQQEVMEELGISMEELQDIIDKELEKFECVKQRKQQ
LEELEKCVKQKEEEVARVDRLFDDASRAIDKCEILVKDLYSKLGLQYRESSSEDEDLAAK
PMEVIEIPDEDDDDVMSIDSGWKHSSVSRCASCNRGEGWKSERVLEEGGNERDQSNSSPR
IAKDQTLLREAMAAMRKSAQDVQRFMDAVNKKTNAQDAQKGQSAGSDLSNDGDLNVGMRI
LGKKRTKTWHKGTLIAIQTVAAGKKYKVKFDNKGKSLLSGNHIAYDYHPSPEKHYVGSRV
VAKYKDGNQVWLYAGIVAETPNVKNKDRFLIFFDDGYASYVKEWELYPICRPLKKTWEDI
EDVSCRDFIEEYITAYPNRPMVLLKNGQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKR
CEWIYRGSTRLEPMFSMKTSTASTQEKKQSGQARTRPNVGAVRSKGPVVQYTQDLTGAGT
QYKPLEQMQAASLATRSVSPHPAEMECSDSQLAQSRKQVAKKSTSFRPGSVGSGQSSPSS
PVLSDTAPAGRSGAAQQHRRGCSVYAFPCPRLSSGQAGSGTAQAFHGMMDRVPNEPSDRA
PLEKLFYLPHVCSYTCLSRVRPICSDQYRSKNPLLIPLLYDFRRMTARRRVNRKMGFHVL
YKTPCGLCLRTMQEIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITKGR
EDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQL
TVQATGCTPGGQINPNSGYQHKRLEECLPTGVYECNKRCKCNINMCTNRLVQHGLQVRLQ
LFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENF
KEGYESDAKCSSDSSGVDLKDEEEENTGTEEQEESNEDSSDDNFCKDEDFSTSSVWRSYA
TRRQTRGQKENGLSETASKDSGLTRQISHDETAVAASCKLPVSEETSKNKVASWLSSNSM
SDGFQDNDSASSFKMSEGSEAKATKAELPGEREKASASALGNVDGESKASKKDEPEDPTK
IPGLSDLGRMYGYNPSPPKLEGIRRPTSKTALLQSRRHSLAPQPTTDDVLTLSSSTDSEG
ENGQAVAGQAQGTTNDSDDIQTISSGSEEEEGDDKKNPSSGSGPVKRQVAVKSTRGFALK
STHGIAIKSTNMAAADKGESAPVRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNL
FVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRL
L
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaatccctggttgcctctctgtggtgtcaggtgcagcagaaatggattcccag
gagatcaaagagctgcagcaagaagtgatggaagagctgggaatctccatggaggagctc
caggatatcattgacaaagagctggagaagtttgagtgcgtgaagcagaggaagcagcag
ctggaggagctggagaagtgcgtgaaacagaaggaagaagaagtggctcgcgttgaccgt
ctctttgatgacgcttcgagagctattgataaatgcgagatactggtgaaggatctgtac
tccaaactgggcctccagtaccgtgagagcagttctgaagacgaggacttggctgccaag
cccatggaagtgattgagatcccagatgaggatgatgatgatgtcatgagtatcgattcg
ggctggaagcacagttcagtatctcgttgtgccagctgcaaccgaggggagggatggaaa
tctgagcgtgtcctggaggagggtgggaatgagagggatcagagcaacagtagtcccaga
atcgcaaaggatcagactctgctgcgggaagccatggctgcaatgagaaagtctgcccag
gatgttcagagatttatggatgccgtgaacaaaaaaacaaatgcccaggatgcacaaaaa
ggtcagtcggccgggagcgatctcagcaacgacggtgatctgaacgtcggcatgaggatc
ctgggcaagaagagaaccaaaacgtggcacaaaggaactctgattgcgatccagacagtc
gctgctgggaagaagtacaaagtgaaatttgataataaagggaagagtttgctttctggc
aatcacatcgcttatgactaccacccctcacccgagaaacactacgttggcagcagggtt
gtggcaaaatacaaagatgggaatcaggtttggctgtatgcgggcattgtggctgaaacc
ccaaacgtaaagaataaagacaggttcctgatcttctttgatgatggctatgcttcatac
gtcaaggagtgggagctgtacccgatctgcaggccactgaaaaagacctgggaagacatc
gaggatgtttcctgtcgcgatttcatcgaggagtacatcacggcctaccccaaccgtccc
atggtgctgctgaagaacggccaactgatcaaaacggagtgggaagggacctggtggaaa
tccagagtggaagaagtggatggcagcctggtcaaaatccttttcctggatgacaaacgc
tgtgagtggatttaccggggttccacgcgcctcgagcccatgttcagcatgaaaacttcc
acagcctccacccaagaaaagaagcaaagtggacaagcaaggacacgtcccaatgtcggt
gctgtcaggagcaaagggcctgtggtacaatatacgcaagatttaacgggagctggtacc
cagtacaaacctctagagcagatgcaggcagcctcgctggccacacggtctgtttctccg
catcctgctgagatggagtgctccgacagtcagctggcccagtcaaggaagcaagtggcc
aagaaaagcacttccttccgtcctggctccgtgggctctgggcagtcgtcaccttcttcc
cctgtcctaagcgatacagctccagcgggaaggagcggtgcggcccagcagcatcgccgc
ggttgctcagtgtatgcctttccctgtcccaggctctccagcggccaggcaggcagtggc
acggcacaggccttccacggcatgatggaccgcgtgcccaacgagccctctgaccgagcc
ccactggagaaactcttctacctgccgcacgtctgcagctacacctgcctgtcccgcgtc
cgtcccatctgcagcgaccagtaccgcagcaagaaccctctgctcatcccgctgctctac
gacttccgacggatgacggcccgccgacgggttaaccgcaagatgggcttccacgtcctc
tacaagacgccctgtgggctctgcctgcggaccatgcaggagatcgagcgctaccttttc
gagacagactgcgacttccttttcctggagatgttctgcctggacccatacgtgctggtg
gatcgcaagttccagccctacaaaccctactactacatcgccgacatcaccaagggcagg
gaggacgtgccgctgtcctgcgtcaacgagatcgataacaccccgcctccccaggtggcc
tacagcaaggagcgcatccccggcaaaggggtttacatcaacaccagctgggagttcctc
gtgggctgcgactgcaaagacggctgcagagacaaatcgaaatgtgcctgtcaccagctg
acggtccaggcgacgggctgcaccccgggtgggcagatcaaccccaattcgggataccag
cacaaaaggctggaggagtgcctcccgacaggagtttacgagtgtaacaagaggtgcaag
tgcaacattaacatgtgcaccaatcgcttggtccagcacgggctccaagtgcgactgcag
ttattcaagacgcagaacaaaggctggggcatccgctgccttgatgatattgccaaaggc
tctttcgtctgcatctacgcagggaaaatcctcacagatgactttgccgacaaagaaggg
ttagagatgggtgatgaatattttgcaaacctggatcacattgagagcgttgagaacttc
aaggagggctacgagagcgatgcgaaatgctcttcggacagcagcggggtggacctcaag
gacgaagaggaggaaaacacaggcactgaggagcaggaggagtccaacgaggacagctct
gatgacaacttctgcaaggacgaggacttcagcaccagctcggtatggcgcagctatgcc
acgcgacggcagacccggggccagaaggagaacgggctgtcggagacggcttccaaggac
tcggggctcacccggcaaatcagccacgatgagacagcggtggctgcctcctgtaagctg
ccggtgtcggaggagacctccaagaacaaagtggcctcgtggctgagctccaacagcatg
tccgacggcttccaggacaacgacagcgcctcctccttcaagatgagtgaaggcagcgaa
gccaaggccaccaaagcggagctccctggggagagagagaaagcgtccgcttctgccctg
ggcaacgtggacggagagtcaaaggcatcaaagaaagatgaacctgaagatccaaccaaa
attcctgggctaagcgacttgggaaggatgtatggctacaaccccagcccccccaagctg
gaagggatccggaggccgacgagcaagaccgccctgctccagagcagacggcattccctc
gccccgcagcccaccacggatgacgtgctgaccctgtcgagcagcacggacagcgagggg
gagaacgggcaggcggtggcggggcaggcccagggcaccaccaacgacagcgacgacatc
cagaccatttcctcgggctctgaggaagaggaaggggatgacaagaaaaacccctcgtct
gggtcaggtcctgtgaagaggcaggtggcggtgaaatccacccgcggctttgccctgaaa
tccactcacggcatcgccatcaagtcaaccaacatggcagcggccgacaagggcgagagc
gcgcccgtccgccgaaccacccgccagttctacgacggagaggagtcctgttatatcatc
gatgccaagctggaagggaacctgggccggtacctcaatcatagctgcagccctaacctc
ttcgtgcagaacgttttcgtggacacgcacgacctccgcttcccctgggtcgcgttcttc
gccagcaagaggatacgagccggcacagagctgacgtgggattacaactacgaagtgggc
agcgtggaaggcaaagagctgctgtgctgctgcggggctatcgagtgccgagggcggctg
ctgtga
DBGET
integrated database retrieval system
