Charadrius vociferus (killdeer): 104287466
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Entry
104287466 CDS
T08577
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cvf03009
]
104287466 (SPATA5L1)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
104287466 (SPATA5L1)
Ribosome biogenesis [BR:
cvf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104287466 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_16
AAA_5
AAA_2
DUF6497
AAA_14
AAA_22
RuvB_N
TIP49
Rad17
DUF815
AAA_7
ATPase_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
104287466
NCBI-ProteinID:
XP_009884478
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
CTAWPRRDLADGYLQVDLSCRTAGVTARDLKGLTLDVGQLKLLACHQLKKAIVKVVLKSS
AVKKSIPRAVLQETIRELLRNVYVSLHYVVTVAPSLENPVVCIEMLSVDPVTDEAGLITP
QTSIKIKEVVTFEWYRHLSEDTARTSIAGLDDVGKSLKEMIDLPFRFPKTFKKLGAVAKE
VGAYLLCISGPALYGSRPGETEENLRRVFEKGREMSHEGPTILFIDEVDSLCAKRGNSNN
APEDRIVAQLLTLLDGVGSGGKMVIMAATNRPDALDPALRRPGRFDREVIIGTPTLTQRR
SILQLLTSSMPISTDVDLVKLAEMTTGYVGADLTALCREAAMQAVFHSSLDSTEMVISMA
DFQEALKKIQPSSFRSAVGLTECKPVTWEQIGGLEDVKLKLKQSIEWPMKFPQAFARMGL
SHPKGILLYGPSGCAKTTLVKAVATSCHCSFLSVSGADLFSPYVGDSEKILSQVFRQARA
NTPAIIFLDEIDSILGSRSHCKTGHGVSERVLSVLLNELDGIGLKVTERRGSKLQLEGQC
QEQNYEERKLEFQETLNKDFMVVAATNRPDMLDDALLRPGRLDKMIYVPPPDLKGRLSIL
KICTEKIPLETDVSLQDVAALTDLFSGADIENLCKEATLLALQENGLEATAVKHEHFVKS
LRTVKPSLNIKDLEFYEKFYNQELAS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
tgcacggcctggcccaggcgcgatttggcggacgggtacctgcaggttgacctgagctgc
agaacggcgggtgtaactgcaagggacctgaagggcctcacgctggatgtcggccagctg
aagcttctggcctgtcaccagttgaaaaaggcgattgtgaaagtggtccttaagagctct
gcagtgaaaaagtcgattcccagagcagtcttgcaggagacgatcagagagctgctaaga
aatgtttatgtttcacttcattatgttgttactgttgccccaagtctcgaaaatcccgtg
gtgtgtattgaaatgctgtctgtagaccctgtgacggatgaagctggactgataacgccc
caaacaagcataaaaattaaggaggtggtcacttttgaatggtacagacatttatcagaa
gacactgcaagaacttcaattgcaggactagacgatgtgggaaaatctttgaaagaaatg
attgatctgcctttccgcttcccaaagactttcaagaagttaggggcagtagcaaaagaa
gtgggtgcatatctgctttgcatcagtggcccagctctctatggttcaaggccaggagaa
actgaagagaatttgcgaagggtctttgaaaagggaagggaaatgtcacatgaaggccca
accattctcttcattgatgaagttgactctttatgcgcaaagcgaggaaattcaaacaat
gctcctgaagatcgtattgttgctcagttgctaacgctactggatggtgtaggtagtggg
ggtaagatggtcattatggcagcaacaaacaggcctgatgccttagaccctgcactgaga
agacctggcagatttgacagagaggttattattgggacaccaacacttacacaaagaaga
tccatcctgcagttgcttacatctagtatgccaatttctacagacgttgatttggttaaa
ctggcagaaatgacaactgggtatgttggagctgaccttacagcactctgcagagaagca
gccatgcaggctgtgttccacagctctttggattcaactgaaatggtgattagcatggca
gatttccaagaagctttaaaaaaaattcaaccatcctcttttcgaagtgcagttggacta
acagagtgtaaacctgttacttgggagcaaattggtggccttgaagatgtgaaattaaag
ttaaaacagagtattgagtggcctatgaaatttcctcaggcatttgctaggatgggcctg
tctcatccaaagggtattcttctctatgggccatcagggtgtgccaaaaccacactggtg
aaggctgtggccacaagttgtcactgttcctttctctctgtaagtggcgctgaccttttc
tcaccttacgttggtgattcagagaagattttgtctcaggtttttcgccaagcaagagca
aataccccagcaataatattcctagatgagattgattctatcttgggatctcggtcacac
tgcaaaactggccatggtgtctcagagcgggttctttctgttcttctcaatgagttggat
ggtattgggctgaaagtcacagaaagaagaggaagcaaactacagcttgaaggtcaatgt
caagaacaaaattatgaggaaagaaagctagagtttcaggaaactttgaacaaagatttc
atggtagttgctgcaacaaatagaccggatatgttggatgatgctttattgcgtcccgga
aggttagacaagatgatctatgttccacctccagatctgaagggaaggctttcaattttg
aaaatctgcacagaaaaaattccattagagactgatgtgtcattacaagatgtggcagcc
ctaacagacctcttctctggagctgatattgaaaatctgtgcaaggaggctactttgttg
gcattgcaagagaatggacttgaagcaactgctgtaaaacacgagcattttgtaaaatca
ttgaggactgtaaaaccatccttaaacataaaagacttggaattttatgaaaaattttat
aatcaagaattagcctcttga
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