Charadrius vociferus (killdeer): 104289597
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Entry
104289597 CDS
T08577
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04010
MAPK signaling pathway
cvf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104289597 (CACNA1H)
04020 Calcium signaling pathway
104289597 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104289597 (CACNA1H)
Ion channels [BR:
cvf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104289597 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
104289597
NCBI-ProteinID:
XP_009886856
LinkDB
All DBs
Position
Unknown
AA seq
2360 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDKNFAMTYNLTFLHPYYRTDEAEE
NPFICSSHRENGMQKCSNIPNRREYKVECTLSMDSYTPSLYNPDFSSRNACINWNQYYNV
CMAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICH
IFRKVKRRTIRLYNNWQSKRRKKVNPNSTTNGQSHRCKKRITSIHHLIHHHHHHHHHHYH
ISNGSPRGPRSNPEICDLELKVMKPGGQLMLPSPSPNLQSPAPPPDSESVHSIYHADCHV
EGPQVNCKSSNAPASIKLTAGLSNHGNMNYPTILPSPTSKASSVPVPKGKKNGNSPVAVV
NSPVNMGTESYGKLQQLVGEHGLRRTPSRLSGLSAACPLPSPPGGTLTCELQDCPFCASL
LEDPEFAFSESDSCDSDSNGVYEFTQDLRHGDHRDQLQQQRGRRRKKKKKPKERNKVTRL
WKAFGSKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFAL
EMLLKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFM
PALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFD
SLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGF
QAEGDANRSDTDEDKTSANFDDDFEKLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIM
RTAATPMPTPKCSPHMDSVHTFVDSRRGSNASLDPLNYDQKSLSSLRSSPCANWGTSSNW
GSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRAES
LDCRSSLDLPELLQLPTMRHSLSVNPMAVLPAEYQDCNGKMVHVPSEFFLRVDSHKEDAI
DYEDDMEDSYCYRIRKVLEPYKPQWCKSHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVV
LVFIFLNCITIALERPDIDPHSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYL
QSSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVV
ETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKTDCTNARYKW
VRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVQNHNPWMLLYFISFLL
IVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEIYLSEAQRRPY
YADYSPARKYIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIV
FVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRV
LRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLECSEE
NPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISPVY
FVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGASTSATSGSRGG
AVALESRAPYRSQETMKSESAVQVKHQALSSFEEKGITPQAGLKASLGKSEQNSGGTASL
RPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKAPFPLHEVEMETYPCKSQRGSITS
IRSQPVGTCSSLRVPTESLQLAVRSPNHEGRHRWKILPPHVTPRSPTLNKLLCRQEAIRR
DSVDGQTPDRKDSLQAEPGETLPSAKQPQSTFTPSPLHSTAASLPGTPPQSPPSSPHRHP
STLTRKHSCGQHGVPSQPPSPGGSPPNPEGSLFESSDLADEEVRHINSSAKDWGGEHSNA
GSRSTSPFVSPAPSPVPLKNCSTTSLSRGSSKEKDLKKFYSIDTKGFLNKPSWADDQRRH
SIEICPSISDGDCSFEDRAHIQTESEYIHGARRKKKMSPPCISIDPPMEDDGGAASRTKP
SENSMLRRRTPSCEFPAYRESLELAESQPGEPASKAERRGQLPCRGEHLTIPNFSFEQLD
GSSLSSLSDLLLDSGQSTPASVDSRPDPATSELKKPDHLKTQWSNSEKSKELLGVAKSPL
QKQDLVPVTVATEEDIDDPV
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatcctcctgaactgtgtcaccctgggcatgttccaaccctgcgaggacgtg
gagtgccagtcagagcggtgcaccatactggaggcatttgacgacttcattttcgctttc
tttgcggtggagatggtcatcaagatggtggctctggggatcttcgggcagaagtgttac
cttggagatacgtggaatcgcctggacttcttcatcgtgatggcgggcatgatggagtat
tctctggatggacacaacgtgagcttgtctgccatccgcaccgtccgggtacttcggccg
ctacgagccattaacagggtcccaagtatgcgaatactcgtcaccctgctgttagatact
ctgcctatgttaggcaacgtcctcctcttgtgcttctttgtcttcttcatctttgggatt
gttggtgtgcagctctgggcagggctgctgagaaacaggtgtttcctagacaagaatttt
gcaatgacatacaaccttactttcctgcatccgtactaccgaacagacgaagcggaggag
aatccattcatctgctcatcgcatcgtgaaaacggcatgcagaaatgctccaacatccca
aacaggagggagtacaaggtggagtgcaccttgagcatggactcctacaccccaagttta
tacaaccctgacttcagcagcaggaacgcctgcataaactggaaccagtattacaacgta
tgcatggcaggggacgtaaacccacacaacggagctatcaattttgataatattggatat
gcctggatagctatttttcaggttataaccctggaaggatgggttgacatcatgtattat
gtgatggatgcacattctttttacaattttatatattttatattgcttataatagttggt
tccttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaaacaaag
cagcgggagaaccagctgatgcaggagcagcgggcccgttatctctccaacgacagcaca
attgccagcttctcggagccaggtagctgctacgaggagctgctcaagtacatctgccac
atcttcaggaaggtgaaacggcggacaatacgtctgtacaataactggcagagtaagcgc
cggaaaaaagttaacccaaatagcaccacaaatgggcaaagccaccgatgcaaaaagcgt
atcacttccatacaccacctcatccaccatcaccatcaccaccaccaccaccactatcac
atcagcaatgggagccctcgggggccacgctccaaccctgagatctgcgacctggaactc
aaggtcatgaaacctggaggccaattgatgcttccttctccatcacccaacttgcagagc
cccgctcctcctccagattcggagtctgtgcacagcatttaccatgcagactgtcatgtt
gaaggaccgcaagtgaactgtaagtcttccaatgcccctgcaagcattaagctgactgcc
ggactctccaaccatggcaacatgaattatcctaccatcctgccttctccaactagcaaa
gccagttctgttccagttcccaaaggaaagaagaacggcaattcacctgtggccgtggtt
aatagccctgtaaatatgggcacggaatcttatgggaagctgcagcaactggtaggagag
catggtctgcggcggacgcccagccggctgtcagggctgagcgcggcctgcccgctgccc
agcccgccgggcggcacgctgacctgcgagctgcaggactgtcccttctgcgccagcctc
ctggaggaccccgagttcgccttcagcgagtccgacagctgcgactccgacagcaacggc
gtctacgagttcacccaggacctgcggcacggcgaccacagagaccagctccagcagcag
cggggcaggaggaggaagaagaagaagaaacccaaggagaggaacaaggtcacccgcctg
tggaaagctttcggcagcaagctgaagaggatcgtggagagcaaatatttcaaccggggg
attatgatcgccattctcatcaacacgctgagcatgggcattgagtaccacgagcagcca
gacgagttgaccaacgccttggagatcagtaacatcgtcttcacaagcatgtttgccctg
gagatgctcctgaaactccttgcctttggcctcttcggctacatcaagaacccgtacaac
atctttgatgggatcatagttgtcatcagtgtttgggagatcattggccagtcagatgga
ggcctctctgtgctacgaacttttcggctgctccgggtgctgaaactggtgcgtttcatg
cctgccctccgtcgccagctggtggtcctgatgaagacaatggacaatgtggccacattc
tgcatgttgctcatgctcttcatctttatcttcagcattctcggcatgcatctttttgga
tgcaagttcagcctgaaaactgatacgggagacacagttccagatagaaagaattttgat
tccttactttgggccattgtgactgtatttcagatcctcactcaagaggactggaacgtg
gtcctgtacaatgggatggcatctacatcctcatgggcagcgctctactttgtggccctg
atgaccttcggcaattacgtgctcttcaaccttcttgttgccattctggtagaaggcttc
caggcagagggtgatgccaataggtcagacacagatgaggacaagacatctgccaacttc
gatgatgattttgaaaagctaaaagacctccgagcaacagagatgaagatgtactcactt
gccgtcaccccaaatggacacctggagggcaggggaagcatgccacctcctataatcatg
cgcactgctgccacaccaatgcccacaccgaaatgttccccacacatggattcagtgcac
acttttgtggactcaaggagagggagcaacgcttcactagaccccttgaactacgatcag
aagtccttgtccagcctccgcagttccccttgcgccaactggggcaccagcagcaactgg
ggaagccgacgctcaagctggaatagcctgggcagagccccaagcctcaagaagaagaac
cagtcaggagagagagagtccttgctctctggggaggggaaaggcagcacagacgatgac
tccgacgacgccaagtccagcacagtcagcaggccctcgttgcaccgccgggcagagtcc
ctggactgccgcagctccctggacctgcctgagctgctccagttgcccaccatgcgccac
tcactcagtgtcaaccccatggccgttctgcctgccgagtaccaagactgcaacggcaag
atggttcacgtccccagtgagttcttcctgcgtgtcgacagccacaaggaagatgccata
gactatgaggatgacatggaggatagctactgctaccgaattcgtaaagtcctggagccc
tacaaaccacagtggtgcaagagtcatgaagactggtccctgtacttgttttccccacag
aatcggttccgagtgatgtgccagaaggtcattgcccataaaatgttcgatcacgtagtg
ctggtcttcatatttctcaactgcatcactatagcactggagcgaccagacatagacccc
cacagcacggaaaggatattcctaagtgtttctaattacatcttcactgcaatctttgtg
gctgaaatgatggttaaggtggtagctcttggctttttctctggggagaacacctatctg
cagagcagctggaatgtcctggatggagtcctggtctttgtatctatcattgatattatt
gtctccatggcatcggcaggcggagctaagatcctgggtgtccttcgcgttttgaggctt
ctgcggaccttgagacctctccgagtcatcagcagagccccaggtctgaagctggtggta
gaaaccttgatctcctccttgaggcctattgggaatattgttctcatctgctgtgcattc
ttcattatctttgggattttaggggtccagcttttcaaaggcaagttctactactgtgat
ggtcctgatgtaaaaaacatcactacgaagactgactgcactaacgcacgctacaaatgg
gttcggcggaagtacaattttgacaatttgggacaggccctcatgtccttgtttgtcctc
tcctccaaagatggctgggtgaacatcatgtatgatggtttggatgccgtgggtattgac
caacagcccgtccagaaccataacccttggatgcttctctacttcatctccttcctgctc
atcgtcagcttcttcgtgctcaacatgtttgtgggggtggtggtggagaactttcacaag
tgccgacagcaccaggaggcggaggaggctcggcgtcgggaggagaagcggctgagacgc
ttggagaaaaagcgcaggagtaaggagatatacctgtctgaagcccaacgcagaccttac
tacgctgactattccccagcgcggaagtacattcacaccctctgcaccagccactatctc
gacctcttcatcacgttcatcattggggtcaatgtcatcactatgtcgatggagcactac
aaccagccaaagtccctggatgaagccctgaagtactgcaactatgtgttcaccatagtt
tttgtgtttgaggcagttctgaagttggtggcgtttggttttcgaaggttctttaaggac
aggtggaatcagctggatttggccatagttctcttatcaattgtgggaatcacgctggag
gaaattgagatgaatgctgcactgcccatcaatcccacaataatacgcatcatgcgggtg
ctgagaatagcaagagtgctgaaactgcttaaaatggccactgggatgcgagctctcctg
gacacagtggtacaagcgcttccccaggtagggaaccttggcctactttttatgctcctg
ttttttatctatgctgccctgggagtggaattgtttggcaagctagaatgcagtgaagaa
aatccttgtgaaggtctgagtcgacatgcaactttcaccaactttggcatggcctttctt
accctcttcagggtgtcaacaggagacaactggaatggtatcatgaaggacactctccgg
gaatgcactcgggaagacaagcactgcctcagttacctgcctgttatctctcctgtctac
ttcgtcaccttcgtcctcatcgcacagttcgtcctagtcaatgtagtggtggcagtgctg
atgaagcacttggaggagagcaacaaggaggccaaggaggatgctgagatggatgctgag
atcgagttggagatgtccagaggagcaagcacctcggccaccagtgggagcaggggaggt
gcagtggccctggagagcagggcaccctacagaagtcaggagaccatgaagtcagagtca
gcggtgcaggtgaagcaccaagccttgagtagctttgaggagaagggcatcacccctcag
gccgggctgaaagcatctctgggaaaatcagagcagaacagtggcggcacagcctctctg
aggccacaggactctcaaaacctgctgacggtccgcaagatctccgtttcccgtatgcac
tccttgcccaacgacagctacatgttccggccagtgatgccagcgaaagctcctttcccc
ctccatgaggtggagatggaaacgtatccctgcaaatcccaaagagggtccatcacctcc
atccgctcccagcccgtgggaacgtgttcctctctgagagtcccaacggagtccctccag
ctggcagtccgttctcccaaccacgaaggccgccaccgctggaagatccttcccccccac
gtcacacctcgatctcctactctcaacaagctgctgtgcagacaggaggccatccgaagg
gactctgtggacgggcagactccggaccgcaaggacagcctgcaagcggagcctggagag
acgctaccatcagcaaagcagccccagagcaccttcacccccagcccactccattccaca
gccgcctccctcccgggcacccccccgcagtcccccccgtcctccccacatcgacatccc
agcacgctcacgcggaagcacagctgcggccagcacggcgtcccctctcagccacccagc
cccggcggcagccctcccaaccccgagggcagcctcttcgagtcctccgacctggctgac
gaggaggttcgccacatcaacagctcggccaaagactggggaggggagcactcaaacgct
gggagccgctcgacttcgccgttcgtctccccggccccatctccggtgcccctcaagaac
tgcagcacaaccagcctctccagaggcagcagcaaggagaaagacttgaagaagttttac
agcatcgatacgaagggcttcctcaacaagcccagctgggcagacgaccaaaggcggcac
tccatcgagatctgcccttccatcagcgatggggactgtagctttgaggaccgtgcccac
atccagacggagtccgagtacatccatggagcccggaggaagaagaagatgagcccgccc
tgcatttctatagatcctcccatggaggatgatggcggggcggcctcgcgcaccaaaccc
tctgagaacagcatgctgcggagaaggaccccatcctgcgagttcccggcttacagagag
tccctggagcttgcggagagccagcccggggagccggcctccaaagcggagcgccggggc
cagctcccgtgccgcggggagcacctgaccatccccaacttctccttcgagcagttggac
ggcagctccttgagcagcctctcggatctcctcctggacagcggtcagtccacgccggcc
tccgtggactcccggccggaccccgccacctccgaactgaaaaagccggatcacttaaaa
actcagtggagcaactccgagaaaagcaaagagctcctgggcgttgctaagagccccctc
cagaagcaggacttggtcccggtgactgttgcgacagaagaagacatagatgacccagta
tag
DBGET
integrated database retrieval system
