Charadrius vociferus (killdeer): 104294239
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Entry
104294239 CDS
T08577
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf00310
Lysine degradation
cvf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
104294239 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvf03000
]
104294239 (PRDM6)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104294239 (PRDM6)
Enzymes [BR:
cvf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
104294239 (PRDM6)
Transcription factors [BR:
cvf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104294239 (PRDM6)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
104294239 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
Zap1_zf1
zf-C2H2_11
zf-C2H2_jaz
zf_PR_Knuckle
Motif
Other DBs
NCBI-GeneID:
104294239
NCBI-ProteinID:
XP_009892126
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MRSFSPQVASPSAYFFALCCTQVQRARGRRAGAGGEKFWGGTNSGAVSSLICVGTSRGRS
QVAEGTGRQGGERAAARFRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNS
ECPTHGPLHPLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQRI
QQGTWIGPFQGVLLLPEKVQAGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRC
ARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVP
STVMEAMSRQDTLQPFNKSSKLSPATPQRSIVFPQTPCSRNFSLLDKSGSIESGFNQISV
KNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQ
SFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQ
ATQLSRHQRMPNECKPITESTESIEVD
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtttctcgccacaggttgcatctccgtctgcgtacttctttgctctgtgctgt
actcaagtacagagagcaagagggagacgtgctggcgctggtggggagaagttctgggga
gggacaaattctggggcggtgagttccctcatctgcgttgggacctctcggggcaggtct
caggtagccgaggggaccgggaggcaggggggcgagcgcgctgccgctcggttccgctgc
acggccgaggagctggactactacctgtatgggcagcagcgcatggagatcatccctttg
aaccagcacaccagtgaccccaacaaccgatgtgacatgtgtgccgataaccgcaacagc
gagtgccccacgcacggccccctccaccccctccgccgtctggtgggcaccagcagtgct
gccgcagcagcccctccgcccgagatcccagagtggttgcgggacctgccccgggaagtg
tgtctgtgcaccagcacggtgcccggcctggcatacggcatttgtgcggcgcagcggatc
cagcagggcacctggatcgggcccttccagggcgtcttgctcttgccagagaaggttcaa
gcgggagccatcaggaacactcagcatctctgggaaatatatgaccaagacgggacactg
cagcactttattgatggtggagaacccagtaagtcaagctggatgaggtatatccgatgc
gcaaggcactgcggggaacagaacttaacagtggttcagtacaggtcaaatatattctac
cgggcttgcatagatatccccaggggcactgagctgttggtgtggtacaatgacagctac
acatctttctttggaatccctctccagtgcattgcacaagatgaaaatttgaatgtccct
tcgactgtaatggaggccatgtccagacaagacaccctacagccatttaataaaagtagc
aaactatcccctgccactccacagcgatccatagtatttccacagactccgtgtagcaga
aatttttctctcctggataagtctgggtccatcgagtcaggatttaaccagatcagtgtc
aaaaaccaacgagttcttgcaagcccaacttcaacaagccaactaaattctgagttcagt
gactggcatctttggaaatgtgggcagtgctttaagactttcacccagcggatcctctta
cagatgcatgtgtgtacgcagaaccctgacaggccctaccagtgtggtcactgctcccag
tctttctcccaaccttcagagctgaggaaccacgtagttacgcattccagcgacagacct
ttcaagtgtggctactgtggtcgtgcttttgctggtgccacaaccctcaacaaccacatc
cggacacacactggagaaaagcccttcaagtgcgagaggtgtgagaggagcttcacacaa
gccacccagctgagtcgacaccagaggatgcccaatgagtgcaagccaataacagagagc
acagaatcaattgaagtggattaa
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