Cyprinodon variegatus (sheepshead minnow): 107082042
Help
Entry
107082042 CDS
T06110
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107082042
Ion channels [BR:
cvg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107082042
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
107082042
NCBI-ProteinID:
XP_015225954
Ensembl:
ENSCVAG00000002170
LinkDB
All DBs
Position
Unknown
AA seq
1972 aa
AA seq
DB search
MAQHLDAPGAASFHPFTRESLKNIEKRIAEEKAKKPNNEEKKQKDRNELKPSRDLEAGKT
LPLYYDIPSGLMLTALEDLDPYYSNQKTFMVVNNKKLIYRFNAASAFYILSPFNLIRRLS
FKILVHSLFSMLIMCTILINCAFMTMNNQQETKSVEYTFTAIYTFEFVVKVLARGFCIGK
FTFLRDLWNWLDFCVIVLAYVTEFADIGNLSVLRTFRVLRTLKAISVIPGLKTIVGALFQ
SVKKLADVMILTVFCLSVFALVGLQLFMGNLRNKCILIPDDSIKNNETLWEAYLQNKSNY
YTPAGKKETLLCGNSTLAGQCPEGYMCKKAGDNPDYGYTSFDNFGWAFLSLFRLMTQDSW
ERLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYEEQCQLNIKKAQEKEDEY
NAAIEQLKCQQEDAQALAIAAAKVNGEALSKGGGTESSSEASKLNSKSIKERRNRRKKRK
EEEERGARKISHSDSFESLTPTHFHFSADAYPLNYDMKCSSTHQSFLSFRGPLLSSRRNS
KASLFSLQTQDGASENEFADDENSIFEGKLSRRESLIDASRRDRHSSSVSQFGFLPHLRF
QPYGIRCSSIDCNGVVSLVDQNPLPTSLPAVLLPPNLTVDMGSSGNHPEMTDTDYKLGSI
ENYSECLDLPDSHQMRQRALSIASVITTTIEELEESRQKCPPCWYKFAHKFLIWDSCPLW
LKIKEKVKIIVMDPFMDLAITICIVLNTLFMAMEYYKMTAWFKDMLRVGNQVFTAIFTVE
MVLKIIALDPYYYFQVRWNIFDAVIVCLSLAEVLLQSVKGMSILRSFRLLRVFKLAKSWP
TLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKYYKDCVCKISDDCRLPRWHM
NDFFHSFLIVFRVLCGEWIETMWDCMRVAGQYQCLTLYMMVMVIGNLVVLNLFLALLLSS
FSADNLMKSGDDDQEVNNLQIAFDRIHRATAYIKFKCSRCYNSLYVREIKTSEEKPFGHN
GIPNHTIKDIPKNGNGEVTGVDKSGDKYIVNSKSDDSILSFIHNPSLTVTVPIAAEESDF
EMLNTEDFSSISSNVPEVHVAVSGFDDEQLSASEGSTVDDLSEGEPAELEFPVFNEIKDP
HDCFTAGCVQKFKCCQVNVNKGFWKVWWTLRKTCYQIVEHNWFESFIIFMILLSSGALAF
EDVYSEQRKTIKVVLEFADKMFTFIFILEMLLKWMAYGFAKYFTNAWCWLDFLIVDVSLV
SLVANALERSDLGAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIFNVLLVCLIF
WLIFSIMGVNLFAGKFYKCVHNDTGEEFPKEIVKYKNDCDIHPNGKWKNLKVNFDNVAMG
YLALLEVATFKGWTDIMYAAVDSPKDPEEQPAYEINLKMYGYFVCFIIFGAFFTLNLFIG
VIIDNFNQQKRKLGGQDIFMTDEQKKYYNAMKKLGSKKPQKPIPRPENKFQGYIFDFVTQ
QAFDIIIMVLIWLNMVTMMVETEDQSKEWKETLNIINIVFIVIFSGECLLKMIALRHYFF
INGWNVFDFVVVILSIVGICLAGVIEKYFVSPTLFRVIRLARIGRVLRLIKSAKGIRTLL
FALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAHVKREKGIDDLFNFETFGNSMICLFQI
TTSAGWDALLDPILNTEKNGDCDPLFEHPGSNNVRGNCGNPAVGIAFFVSYIIICFLIVV
NMYIAVIIENFGVATEESTEPLSEDDFEIFYEVWEKFDPLATQFVKYNMLSDFADALTPP
LRIPKPNKFELVSMDLPVVSGDRIHCLDILFAFTKRVLGDSEDMDSLRAQMEERFMAANP
SKVSYEPITTTFRHKQENVSAAVIQRAFRHYTRKKIFDAVIANDEKGEQLSDKEDHVTEK
PKEVSIADRAEQPPLKDSQSSSNSVTPNGDNKHKKDESEKEVESKDISEQNK
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaccttgatgcaccaggcgctgctagctttcatccctttacccgtgagtca
ctaaaaaacattgagaaaaggatcgctgaggagaaagccaagaaacccaacaatgaagaa
aaaaaacaaaaagacaggaatgagctcaaaccaagccgtgatctggaggcaggaaagact
ctgccactttattatgacattccttcagggctgatgttgacggcactggaggacttggat
ccctactactctaatcagaaaacttttatggtagtaaacaacaagaagctcatttatcga
ttcaatgctgcctctgccttttacattctgagccccttcaatctcatcagaaggctgtca
ttcaaaattctggtgcactcgttgtttagcatgctgatcatgtgcactatcctcatcaat
tgtgcattcatgactatgaataaccaacaggagacaaagtcagttgagtacacatttact
gcaatctacacctttgaatttgtagttaaggttttggcaagaggattctgtatagggaag
ttcacatttttaagagatctgtggaactggctggacttctgtgtcattgttttggcgtat
gtaactgagtttgcggacattggaaatctttcagttcttcgaacattcagggtgctgaga
acattaaaagcaatttccgtaatcccaggtctaaaaacaattgttggtgcattattccag
tctgtaaagaaacttgctgatgttatgatcctgacagttttctgcttgagtgtatttgca
cttgttggattacagctgtttatgggaaacttgaggaataaatgcatattaatcccagat
gattctatcaaaaataatgagacactatgggaagcatatctacaaaacaaaagtaattat
tacactcctgctgggaaaaaagagacattactctgtggaaacagtactttggctgggcag
tgtccagaggggtatatgtgtaaaaaagctggagacaacccagactatggttatacaagc
tttgacaactttggttgggccttcctttctctgttcagactaatgacacaggattcctgg
gagcgcctttatcagcagacactgcgagcagctgggaagccctacatgatcttttttgtc
ttggttatattccttggttccttctatttgataaacttgattttggctgtagtggctatg
gcctatgaggagcagtgccagctcaacataaaaaaagctcaggagaaggaggatgaatat
aatgcagctatcgagcagctaaaatgtcagcaagaggatgctcaggcattggcaatagca
gctgcaaaagtcaacggagaggccttgagtaaagggggtggaactgaaagttcctcagag
gcttctaagctgaactccaaaagcatcaaagaacggcgcaaccggcgaaaaaagagaaaa
gaggaggaagaaagaggagccaggaagatatctcattcagattcctttgaaagtttaaca
ccaactcatttccacttctctgcagatgcttacccactcaactatgacatgaaatgttca
tctacacaccagtcctttctgagtttccgtgggcccctgctctcatccagaagaaacagc
aaagccagccttttcagtctccaaacacaagatggtgcttcggaaaacgagtttgcagat
gatgaaaacagcatttttgaagggaagctgagtcggagggaatccctgatagatgcttcg
agacgtgatagacacagcagcagtgtgagccagttcggcttcttacctcatcttcggttt
caaccctatgggatcaggtgcagttctattgactgtaatggggttgtgtctctggtggat
cagaatccacttccaacatcgctacctgcagtgcttctaccacctaatctgacagtagat
atgggctcctctggaaaccatcctgagatgacagacacagactacaaactgggcagcatt
gaaaactacagtgagtgtttggacctacctgacagccatcagatgagacagagagcatta
agtatagccagcgtcatcacaaccaccattgaagaactggaagaatcaaggcagaaatgt
cctccttgctggtacaaatttgcccacaaatttctcatctgggacagttgcccactttgg
ttgaagatcaaagaaaaagtcaaaattattgtgatggacccattcatggacctagctatc
accatctgcattgtattaaacacattattcatggccatggagtattataaaatgactgct
tggttcaaagatatgctgcgtgtgggcaaccaggtgttcacagccatctttacagtagaa
atggtactcaagataattgcattggacccatactattactttcaagtgcgatggaatatt
tttgatgcagtcattgtctgcttaagcttggcagaagttcttctgcaatcagtgaaaggc
atgtccattctaagatcgttcagactgctgagagtgttcaagttggctaagtcctggccc
actctcaataaactcatcaaaataattggtaattccgtcggagctctgggcaacctgacc
ctggtgctggcaatcattgttttcatctttgctgttgtgggcatgcagctgtttggaaaa
tactataaggattgtgtttgtaaaatctctgacgactgcagactgcctcgttggcacatg
aatgacttcttccattcattcctcattgtgttccgagtgctttgtggagaatggattgaa
accatgtgggactgtatgagagtcgcagggcaataccagtgtctcactctctacatgatg
gtcatggttattggaaatcttgtggtgctgaacttgttccttgccctcttgctgagctca
ttcagtgcagataatctgatgaagtctggggatgatgatcaggaggtcaacaatttgcag
attgcatttgatcggatacacagagctacagcttacatcaagttcaagtgttcaagatgt
tacaatagtttgtacgtcagagaaataaaaacaagtgaggaaaaaccatttgggcacaac
ggtatcccaaatcatactattaaagacatccctaaaaatggcaatggggaagttactgga
gtggacaaaagtggggacaagtacatagtcaacagtaagagcgatgattccatcctttct
ttcatacataacccaagtctgactgtgaccgttcctattgctgctgaagaatcagacttt
gaaatgctaaacacagaagacttcagtagcatttcatccaatgtgcctgaagttcacgtg
gctgtcagtggttttgatgatgagcagctaagtgcctctgaggggagtacagtggatgac
ctgtcagaaggagagccagctgagcttgaattccctgtattcaacgagataaaggaccca
catgactgctttaccgcaggctgtgtgcagaaattcaaatgttgccaagtaaatgtgaat
aaaggcttttggaaagtgtggtggacactaaggaagacctgttaccagatagttgagcac
aactggtttgaaagcttcatcatcttcatgattttgctgagcagtggagcacttgctttt
gaagatgtgtattctgagcagaggaagacaatcaaagtagtattggagtttgctgacaaa
atgtttaccttcatcttcattctggaaatgctcctgaaatggatggcatatggatttgca
aagtatttcacaaatgcatggtgctggctggacttcctcattgttgatgtctcactggtc
agtttggtggctaatgccttagaacgctcagatttaggagcaatcaaatctctgaggacc
ctgcgagctctaaggccactaagagccctgtcgaggtttgagggcatgagggtagttgtc
aatgccctcctgggagccattccttccatatttaatgtgctgttggtatgcctcatcttc
tggcttattttcagcataatgggagtcaacctatttgcaggaaagttctacaaatgtgtt
cataacgacactggtgaagaattccccaaagaaatagtgaaatacaaaaatgactgtgat
attcatccaaatggaaaatggaagaacctcaaagtcaactttgacaatgtggcaatgggc
tatcttgctcttctggaagttgcaacgttcaaaggctggacggatatcatgtatgctgct
gtggattctccaaaagatccagaggaacagccagcatatgaaatcaacttgaagatgtat
ggatattttgtttgcttcatcatatttggggctttttttacccttaatctcttcattggt
gtcattatagacaatttcaatcaacagaagagaaagttaggaggtcaagacattttcatg
acggatgaacaaaagaaatactataatgctatgaagaagctgggatcaaagaagccccag
aagccaattccaaggccagagaacaagtttcaaggatacatttttgattttgtcacacaa
caagcatttgatattataataatggttctgatatggctaaatatggtaaccatgatggtg
gaaacagaggaccagtctaaagaatggaaagaaaccctcaacatcatcaacatagtgttc
attgtcatcttctctggagagtgtcttttaaagatgattgcacttcgccattactttttc
atcaatggttggaatgtttttgattttgttgtggtcatcctgtcaattgttggcatttgt
cttgcaggtgtgatagagaagtattttgtctctccaacgctgttcagagtgattcgactg
gctagaataggccgcgtcctccgccttataaaaagtgccaagggaatccgcacactcttg
tttgccttgatgatgtcacttcctgcgttgttcaatattggtctcttgctcttcttagtg
atgtttatctatgccatttttggaatgtcaaactttgcccatgtcaagagggagaaaggc
attgatgacctttttaattttgaaacctttggaaacagcatgatctgtttgtttcaaatc
accacatcggcagggtgggacgccctcctggatccaatactcaatacggaaaaaaacggg
gattgtgatcctctatttgagcatcctggtagtaataacgtgagaggaaactgtggaaat
cctgctgtgggaattgccttctttgtgagttatataattatctgcttccttattgttgta
aacatgtacattgcagtaatcatagagaattttggggtggccactgaggagagcactgaa
cctttaagtgaggacgactttgaaatattttatgaggtctgggaaaagtttgaccctctt
gctacacagtttgttaaatacaacatgctgtcagactttgccgatgctttaaccccccca
ctacgcattcccaagcctaacaaatttgagcttgtctctatggatctaccagttgtgagt
ggtgaccgcattcactgccttgatatcttatttgcctttacaaaacgtgttttgggtgat
agcgaggatatggacagtctcagagcacagatggaagaacgcttcatggctgcaaatcca
tccaaggtttcgtacgaacccatcacaaccacctttcgccacaaacaggaaaacgtgtca
gctgctgtgattcagagagctttcagacattatactaggaaaaagatttttgatgcagtc
attgctaatgatgagaagggtgaacagctgtctgacaaagaagatcatgttacagaaaaa
cctaaagaagtatcgattgccgatagggcggaacagccacctttgaaggactctcaatct
tcaagtaacagtgtgacaccaaatggggacaacaaacataaaaaggatgaaagtgaaaag
gaagttgagagcaaggacatcagtgaacaaaataaataa
DBGET
integrated database retrieval system
