Cyprinodon variegatus (sheepshead minnow): 107084661
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Entry
107084661 CDS
T06110
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg00310
Lysine degradation
cvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107084661 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvg03000
]
107084661 (prdm6)
03036 Chromosome and associated proteins [BR:
cvg03036
]
107084661 (prdm6)
Enzymes [BR:
cvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
107084661 (prdm6)
Transcription factors [BR:
cvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107084661 (prdm6)
Chromosome and associated proteins [BR:
cvg03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107084661 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
107084661
NCBI-ProteinID:
XP_015230074
Ensembl:
ENSCVAG00000018522
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLPPPPPPADRLSIVVDTLRPSRLHT
HLLASTHCTPSSSSSSTSSSAAPSSSSAAAASLTPSSSISTSAGFSQLPVQQQIALFGQA
LAPVCSGPAVGPGGGGPGGAADLVVVLPPDNQQGHNPAPELLHQAKEQSCGGVGVVSSSV
KSSGEESGRLKLTSEELDYYLYGQQRMEIIPLSNHAGELSNRCDMCADNRNGECPMHGPL
HSLRRLVGTSSTAAPVPLPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTWIGP
FQGVPLMVEKLQSGAVRNTRHLWEIYDAEGTLQHFIDGNDPSKSSWMRYIRCARHCGEQN
MMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPATVMEAMT
RHESLQSFSKNSKPSSSSSSSPPAALLRSMVFPHSPCSRSFSLLDKVGVGVQSDSTFGPL
GSKNQRVLASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMHVCPQNPDRPYQCGHC
SQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCDRSF
TQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggagaccccagcggctcggccttcctgaaggtggacccttcctacctg
cagcactggcagcagctcttccctcaggctcagctcaaggctcctctgccccccccacct
ccgcccgctgaccgcctctccatcgtcgtggacaccctgcgcccgtcccgcctgcacacc
cacctcctggcctccacgcactgcaccccctcatcctcttcctcctccacatcttcctca
gcggctccttcttcttcttctgcagcggctgcttctctgactccatcctcctccatctcc
acctctgcgggtttctctcagctgcccgtccagcagcagatcgccctctttgggcaggcg
ctggctccggtgtgctccgggcctgcagtgggaccaggaggaggaggaccgggaggagca
gcggacctggtggtggtgctccccccggacaaccagcagggtcacaacccggcgccggag
ctcctccatcaggctaaggagcagagctgtgggggggtcggggtggtgtcgtccagcgtg
aagagcagcggggaggagagcgggaggctgaagctgacatccgaggagctggactactac
ctgtacggccagcagaggatggagatcatcccgctgagcaaccatgcaggggagctcagc
aaccgttgtgacatgtgtgcggataacaggaacggagagtgtcccatgcacggcccgctt
cactctctgcgccgtttggttggaaccagcagcacggcggcgcctgttcctctaccggac
gtccctgattggctgagggatctgcccagagaggtgtgcctctgcaccagcacggttcct
ggtctgggttatgggatctgcgccgctcagaggatccctcaggggacgtggatcggcccg
ttccagggcgttcccctcatggtggagaagctgcagtccggcgccgtgaggaacaccagg
catctgtgggagatctacgatgccgagggaacgttgcagcactttattgatgggaacgat
cccagtaaatccagttggatgaggtatatccgctgtgcgagacactgtggggagcagaac
atgatggtggttcagtacaggtcctgtatcttctacagagcctgcatggatatccccaga
gggacggagctgctggtctggtacaacgactcctacacgtccttctttggtatcccgcta
cagtgcatcgctcaggatgaaaacctgaacgttccagctacggtgatggaggccatgacc
aggcatgagtccctccagtccttcagcaaaaacagcaaaccttcctcgtcttcctcctcc
agcccgccggccgccctgctgcggtccatggtcttcccccactccccctgctcccggagc
ttctccctgctggataaggtcggggtcggagttcagtccgactccaccttcggcccgctg
gggtcgaagaaccagcgagtcctggccagcccgacctccaccagccagctgagcagcgag
ttcagcgactggcatctgtggaagtgtggccagtgtttcaaaaccttcacccagaggatc
ctgctgcagatgcacgtctgtccacagaatcctgaccgaccgtaccagtgcggccattgc
tcccagtccttctctcagccctcggagctgaggaaccacgtggtgacgcactccagcgac
cgaccgttcaagtgcggctactgcggccgcgccttcgccggcgccaccaccctcaacaac
cacatccgcacgcacaccggagagaagccgttcaagtgcgaacgctgcgaccgcagcttc
acgcaggccactcagctcagccgccatcagcggctccccaacgagtgcaaaccggtgaac
gaaagcagcgagtccatcgaggtggattaa
DBGET
integrated database retrieval system
