Cyprinodon variegatus (sheepshead minnow): 107087687
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Entry
107087687 CDS
T06110
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04020
Calcium signaling pathway
cvg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107087687
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107087687
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvg04040
]
107087687
Ion channels [BR:
cvg04040
]
Ligand-gated channels
Glutamate (ionotropic)
107087687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
107087687
NCBI-ProteinID:
XP_015234886
Ensembl:
ENSCVAG00000006870
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MDRALQADKTVVTPGFELRQCPQKCPRLIWTGPSVCSALIELFRSEELKGEGSNFLQLGS
SIEQQINGMFKVMEEYNWDSFVVITSLYPGYEAYVDYIKSFTDTSYFMWDLQDVLSFDMS
ADSMNDIRARRLLQQIDAQVLLVYCSHEEAQYLFSLATEVGLVGPGYIWIIPSMAVGNPD
IPPPDSFPVGLISIITDRWRMSLRKRVRDGVAIVVKGVQSFRKQRGFVPEGHSDCHNPVK
QSATNDTLFRHMLNVTWEHNDFSFNSNGYLVNPAMIVITLDRERQWDKVGTYEMGILQMR
YPVWPRFGSYFEPVSDYRHLTVATLEERPFVIVEAVDPETGTCVSNTVPCRRQSNKTEAI
VGHTEPYTKLCCKGFCIDILKKLSRTIKFSYDLYLVTNGKHGKLVRGIWNGMIGEVFYKR
ADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVM
CLTVVAITVFVFEYCSPVGYNRSLVTAKDPGGPTFTIGKSVWLLWGIVFNNSVPIENPKG
TTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQEQYPPFRFGT
VPNGSTERNIRSNYPEMHSHMVKYNQKGVEDALNSLKTGKLDAFIYDAAVLNYMAGKDEG
CKLVTIGSGKVFATTGYGIALQKDSRWKRPIDLALLQFLADGDTQKLQTVWLTGICRNEK
KEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLLYWKLRHSVRKSERLDFLLAISRG
IYSCFNGVEQSDHNGSLQSPDITTNYTQANMLKMLRTAKDMVSSARVENSLDSATKTIES
WSRRGADNVRAGLPPRVTTTDVTHGRLPYISSITDNHSPYPQRAITPTFPVHYGDTSTQP
LLEKARVVTRPTPLRYTLPARGSQHLLERTLPISSLSSPHIAIRDPAPSGISNPHHSSRL
YVENQSRHPASPFVTYREFQVPDIYMEHRGPLRRKFSYPPDCVSRRRRSFSYLFNNQEPR
VRVDYDEPRSCFAELRANHLLNNQGPDGVAMACPAGHYPGTSTTCNSCMKSYLEPEMDDI
PLLGKDKLNRRASFLRATWDNERIRQVDETKPSTSTAPSTRTDMPDLFPQGAGPNPKPHK
LYGSLGHNLSCYPLAAEPAYLDPAHMGSYPYKQKIKYADSTRLPSYREAMLQNAAALRRS
SSTVVHRHYSTYLNSYTDLPVYVGPLTQGPSQLYNNSKDMCHLFPCTSHCPDNAAMLPRM
SDRQLVYHNNMFGPYDVRGNREDLGSGSRERRQVLVARRVNSPYVPKPWGRVSSLESEV
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggatagggctttgcaggctgacaagacggtcgtgactccaggctttgagctgcggcag
tgcccgcagaaatgccccaggctcatttggaccgggccatctgtttgctctgcgctaatt
gagctgttcaggtctgaggagctaaagggtgaaggttccaacttcctccagctgggctcc
tccattgagcagcagatcaacgggatgttcaaggtgatggaggagtacaactgggacagc
tttgtggtcataacgagcctgtaccccggctatgaagcctacgtggattacatcaagtcc
ttcaccgacaccagctacttcatgtgggatctgcaggacgtgttgtccttcgacatgtcg
gccgacagcatgaacgacatacgagcgcggaggttgcttcagcagattgatgcccaggtc
ctcttagtctactgctcccatgaggaggcgcagtaccttttttcattagcaactgaagtt
ggactcgtagggccgggctacatctggattatccccagcatggctgtgggaaacccagac
atcccgccgcccgacagcttcccggtgggcttaatcagcatcatcacggaccgctggagg
atgagtttgaggaagagagtgcgtgatggggtggccatcgtggttaaaggggttcagagc
tttaggaaacagagaggcttcgttcctgagggccacagcgactgccataaccccgtcaaa
caatccgctaccaacgacaccctgttcagacacatgctgaatgtaacatgggagcacaat
gacttctccttcaacagtaatggctatctggtgaacccagccatgattgtcattactctg
gacagagagagacagtgggacaaggtggggacgtacgagatgggaatcctgcagatgaga
taccctgtgtggccgcggtttggctcctactttgagcctgtgtctgattacagacatctg
actgtggctacactggaagagcggccgttcgttatcgtagaagcggtggaccctgagact
ggtacctgtgttagcaacactgtaccctgcagacgacagtccaacaagacggaggcgatt
gtaggtcacaccgagccatacacaaaactgtgctgtaaaggattctgcatcgacattctg
aagaaactctcacgcaccatcaagttctcctatgacctttacctggtgaccaatggcaag
catggcaagctggtcagagggatttggaacgggatgatcggagaggttttctacaaacgg
gcggacatggctataggctcactgaccataaacgaagaacgttcagagatcattgatttt
tcggttccatttgtggagacggggataagtgtgatggtggctagaagtaatgggacggtg
tctccgtcagcttttctagaaccatacagtccagcagtctgggtgatgatgttcgtcatg
tgtctgacagttgtggcaatcactgtgtttgtcttcgaatactgcagtccagttgggtat
aaccgcagcctcgtcaccgctaaagatcccggaggtcccacattcactatagggaaatcg
gtgtggctattgtggggaatcgtcttcaacaattcggttcccattgagaatccaaagggc
accaccagtaaaatcatggtactggtctgggccttctttgctgtcatcttcctggcttcc
tacacagccaatctggctgcctttatgatccaggagcaatacatcgacaccgtgtccgga
ctgagtgacaaaaagtttcaaaagccacaggagcagtatcctccgttccgctttggtacg
gtcccaaatggcagcacggagcgaaacataaggagtaactaccccgagatgcactcccac
atggtcaaatacaatcaaaaaggagtggaagacgctcttaacagccttaaaacagggaaa
ctggatgcctttatctatgatgctgctgtgctgaattacatggctggcaaagacgaagga
tgtaaactggtaaccattggcagtgggaaagtgtttgcaacgactggttatggcattgct
ctgcagaaggattcccgctggaaacggcccatcgacctggccctgctgcagttcctggct
gatggtgacacacagaagcttcaaactgtgtggctcacaggcatctgtcgtaacgaaaag
aaggaggtcatgagcagtaagctcgatattgacaacatggccggggtcttttacatgctg
ctggttgctatgggcctcagtctgctggtgtttgcttgggaacatctgctctactggaaa
cttcggcattcggttcgcaaatccgagcgactggacttcctcctagctatcagcagaggc
atctacagctgcttcaatggagtagagcaatctgaccacaatggaagcctgcaaagtcca
gacatcaccactaactacacacaagccaatatgctgaagatgctgaggacggccaaagac
atggtgtcctccgccagagtcgagaactctctggacagtgccactaaaacaatagaaagc
tggagcagacgtggagccgacaacgtgcgagctggccttcctcccagagttacaaccaca
gatgtaacccacggccgtctgccctacatctccagtataacggacaatcactccccatat
cctcagagggccattacaccaacattcccagttcattacggggatacatcaacccagccg
ctccttgagaaggccagggtggtaacccgaccgacgcctctgcggtacacgctgcccgcc
cgcggcagtcagcacctgttagagagaactctgcccatctccagcctcagcagcccacac
atcgccatcagagatccagctccctctgggatttctaacccccaccacagcagcaggctg
tatgtggagaaccaaagccggcaccccgcatccccgtttgtgacttacagggagttccag
gtacctgacatttacatggagcacaggggacccctacggagaaagtttagctacccccca
gactgcgtgagccggagaaggaggtcattcagttatctgtttaataaccaagaacccaga
gtgagagttgactatgatgaacctcggtcctgctttgctgagctgagagctaatcacctc
ctgaacaaccagggccctgatggtgtagctatggcatgccctgcaggacactaccccggc
accagcacgacctgcaactcctgtatgaagtcctacctggagccagagatggatgacatc
ccccttttgggaaaggacaaattaaatcgacgagcctcgtttctcagagccacgtgggac
aatgagagaatccgtcaggtagatgaaacaaagccctccacatccacagctccctccacc
cgaacagatatgcccgatttatttcctcagggggctgggcccaatccaaagcctcacaag
ctgtacggcagtctggggcacaacctctcctgttaccccctggccgctgagccggcctac
ttagacccagcccacatgggttcctacccctacaagcagaagataaagtacgccgactct
acccgactgccctcatacagggaagccatgttgcagaatgctgctgccctccgccgctcc
tcttccacagtggtgcacagacattactccacctacctgaactcatacacagacttaccg
gtgtatgtggggccactcacacagggaccatcccagctctacaacaattcaaaggacatg
tgccacttgtttccgtgcaccagccactgccctgacaatgcagcaatgctccctcgaatg
agtgacaggcagctggtttaccacaacaacatgtttgggccttatgatgtcagaggaaat
agggaggacttgggctcggggagccgagaacggaggcaggtgctggtggcgcgaagagtc
aacagtccctatgtgccaaagccctggggcagagtgtccagcctggaatccgaggtctga
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