Cyprinodon variegatus (sheepshead minnow): 107088897
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Entry
107088897 CDS
T06110
Symbol
polr1c
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg03020
RNA polymerase
cvg04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107088897 (polr1c)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107088897 (polr1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvg03021
]
107088897 (polr1c)
Transcription machinery [BR:
cvg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107088897 (polr1c)
RNA polymerase I system
RNA polymerase I
107088897 (polr1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
107088897
NCBI-ProteinID:
XP_015236852
Ensembl:
ENSCVAG00000005684
LinkDB
All DBs
Position
Unknown
AA seq
227 aa
AA seq
DB search
MMDACEETAEEEASEIDTIQLQLKIKCSRNPRASKDSSDPRELYLNHMVYSKDIEWVPIG
NQADVFADSRIGPVHDDILIAQLRPGQELDIVMHCVKGVGKDHAKFSPVATASYRLLPEI
TLLEPVEGEKAERLKRCFSRGVIDLEDVRGKKVAKVVNSRLDTCSREVLRHSDLKNSVKL
GRVRDHFIFTVESTGILPPDVLVTEAIKVLMGKCQSFLNEMNTVDME
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgcctgtgaagagactgccgaagaagaagcttcagagatcgacacaattcaa
cttcagctgaagattaaatgcagcaggaacccccgagctagcaaagattcctctgaccca
cgggaactctatctcaaccacatggtttattccaaagatatagaatgggtccccattgga
aaccaggcagatgtgtttgcagactcccgtatcggacctgtgcacgacgacatcctgata
gctcagctgcgaccgggacaggagctggacatcgtcatgcactgcgtaaaaggagtcgga
aaggaccatgccaagttttctcctgtggcgacagccagctaccgcctcctcccagagatc
accctgctggagccggtggagggcgagaaggcggagcgcctgaagcgttgcttctcacgg
ggggtgatcgacctggaggacgttcggggaaagaaggtggccaaggtggtgaacagccgc
ctggatacgtgcagcagggaggttctccggcacagcgacctgaagaactccgtaaagctg
gggagagttcgggaccatttcatctttactgtggagtcgacgggcatcctgcctcctgac
gttttagtcacagaggccatcaaagtcctgatggggaaatgtcagagtttcctcaacgag
atgaacactgtggatatggagtaa
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