Cyprinodon variegatus (sheepshead minnow): 107094681
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Entry
107094681 CDS
T06110
Symbol
vcam1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
107094681 (vcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cvg04090
]
107094681 (vcam1)
04091 Lectins [BR:
cvg04091
]
107094681 (vcam1)
CD molecules [BR:
cvg04090
]
Proteins
107094681 (vcam1)
Lectins [BR:
cvg04091
]
I-type lectins (Siglecs)
107094681 (vcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
ICAM1_3_5_D2
Ig_5
Ig_4
C2-set
ICAM_N
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
107094681
NCBI-ProteinID:
XP_015245943
Ensembl:
ENSCVAG00000021734
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MDLLQDHWSFVQLLSVILLMSSWCVQGLRVNVFPRKPLFKLGTLQQVVCQVQECSAVPDI
SWFTVNDRPLLASTATNRTHSVLTFNSVTIQDEGQMACKVMCAGQLAEIRTSVSVYSFPS
DPVITGHDHLRDNVVTSLTCQVPHLYSAEDVDFTWLKGNTVLNSTNTQSGSSSVTYTPQK
KDSGGNITCRVTLKLQGLPSEKRTRETTVHINVLYAPVFRNVSGPMEVMAGSPLTLSCSA
EGNPEPTITWTVGGRFLHSAPDGLFVLSAVELSDAGRYECKAINSEGNQTAAVDVSVLAP
PTMTFLLVDPGEEVVEGQQVNFTCGSEGAPPPTLVLKRKGEELHRNESASVCMFSLPFAV
LEDSALYECEASNQYGSQHTSRFITVRAHPLQVEASPQVSAERGSALTLTCRASGCLHPP
TLSWRRTDRNRTLLQKKKQRDGRSQLHLWNLDLQHQGGYSCEAECDSVIRTREIHVQVYS
FPSDPVLEDPGPVLLGQETEYHCNVFNIFSANQLRFSWLSGNETLMMEMYKSSGSLQNIS
SVLKHQFEKVQQVLTCRVELLTEDRDIWKSRRTSIPLQIHYPPRLPSLSISPGDEVLEGQ
QVTFTCRSDGVPPPAVVLRRNGEELLRSDSDSSSSITLSISSALLEESGLYQCEASNQYG
SQFVSSSVTVKAPPRNTTVLILPSAEVKEGQNVTVCCQTISFPPSAVILRKLNNGTELYS
TNGTFLLVNVTSRDSGLYQVNVSNDLGSEIKVFSIRVREVRTGVPPGFSIILISAACIAA
GLTAFALVLDYMRRSRKKGFYQLAQSAPPSA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggacctgctgcaggaccactggagctttgttcagctcctctcagtgatactgctgatg
tcatcgtggtgcgttcagggtctccgtgtcaacgtgtttcccaggaagcctctatttaag
ctcggcacgctccagcaggtggtctgccaggttcaggagtgttcagcagtacctgacatt
tcctggtttaccgtaaacgaccgtcctctgttggcgtccaccgccaccaacaggacccac
tctgttctgaccttcaactctgtgacaatacaagacgagggacagatggcatgtaaagtc
atgtgtgcaggacaactggcagagatccggacctctgtctcagtttactcctttccttca
gaccctgtaatcacaggtcatgaccacctgagagataacgtggtgacgtccctcacctgc
caggtcccacacctctactctgctgaagatgttgatttcacctggcttaaaggaaacaca
gttctgaatagcactaacacacagtcagggtctagctcagtgacttacacgcctcagaaa
aaggactctggggggaacatcacctgccgggtgacgctcaagcttcaaggtctgccatct
gagaagaggacgagagagaccacagtccatataaacgtcctctatgctccggtcttcagg
aatgtatctggccccatggaagtgatggcgggctctccgctgactctcagctgttctgca
gagggaaacccggagccaaccatcacctggacagtaggtggtaggtttctgcattctgct
cctgatggtctgtttgtcctgtcggctgtcgaactttctgatgctggacgatacgagtgt
aaagccataaactcagagggaaaccaaactgcagctgtagacgtcagtgttcttgctccg
cctaccatgaccttcctgttggtggatccaggtgaggaggtggtggaaggtcagcaggtg
aattttacttgtggctccgagggagctccacctcctacactggttctgaagaggaagggg
gaggagcttcacaggaatgagtccgcctccgtatgcatgttcagcctcccttttgctgta
cttgaggactctgccctctatgagtgtgaagcctccaatcagtatggctcccagcatacc
tccaggttcatcactgtcagagcccaccctctacaggtggaggccagccctcaggtctca
gcggagcggggctcagcgcttacgctgacttgtagggcctcagggtgcctgcaccccccc
actctcagctggaggaggacagaccggaaccgaaccctcctccagaagaagaagcagcgg
gatgggcggtctcagcttcacctgtggaacctggaccttcagcatcagggagggtacagc
tgcgaggccgagtgtgactccgtcattaggaccagggagatccacgtccaggtgtactca
ttcccctctgatcctgttctggaggatcccggtcccgttctgcttggccaggaaactgaa
tatcactgcaatgtcttcaacattttctcagccaatcagctgaggttctcctggctttca
ggaaatgaaaccctaatgatggagatgtacaagtcctctggttccctgcagaacatctca
tcagtcttaaagcaccagtttgagaaggtgcagcaggtcctgacctgtagggtggagctg
ctgacagaggacagagacatttggaaatccagaaggacaagcatccctctgcagatccac
tatcctcccaggttgccctccctgtccatcagtccaggtgatgaggtgctagagggtcag
caggtgacgtttacctgccgttcagatggagttccaccacccgcagtagtgttgaggaga
aatggggaggaacttctgaggagtgactctgattcctcctcctctatcactctcagcatc
tcctccgcccttctagaagagtcgggcctctaccagtgtgaggcctcgaaccagtacggc
tcccagtttgtctccagctctgtcacagtcaaagctcccccgaggaacaccaccgtcctc
atccttccctctgcagaagtcaaggagggacaaaatgtgactgtctgctgccagacaatc
agcttcccaccatcagctgtgatcctgaggaagctaaacaacggaacagagctgtattca
accaatggcaccttcctattggtcaacgtcacatccagagactctgggttgtatcaggtt
aacgtgagcaacgatcttggttctgagatcaaagtcttcagcatcagagtcagagaggtc
agaaccggagttcctccaggtttcagtatcatcctcatttcagccgcctgcattgctgcc
gggctcacggcttttgctttggtcctcgactacatgaggagatccaggaagaaaggtttt
tatcagctggcccagtccgccccgccttcagcatga
DBGET
integrated database retrieval system
