Cyprinodon variegatus (sheepshead minnow): 107098104
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Entry
107098104 CDS
T06110
Name
(RefSeq) neurogenic locus notch homolog protein 1-like isoform X1
KO
K02599
Notch 1
Organism
cvg
Cyprinodon variegatus (sheepshead minnow)
Pathway
cvg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
107098104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
NOD
Notch
NODP
Ank_3
Ank_5
Ank_4
EGF_3
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
107098104
NCBI-ProteinID:
XP_015251055
Ensembl:
ENSCVAG00000021508
UniProt:
A0A3Q2DG35
LinkDB
All DBs
Position
Unknown
AA seq
2505 aa
AA seq
DB search
MHIFLLVKLTFLLSLIGITRGLRCSMPTESCLNQGKCESTPDGNGECKCRDGYVGSRCQF
HDPCNNGPCMNGGTCRAVSKGNTVDFNCTCRIGYTDRRCMTPINIACLSSPCHKGGTCEP
DGPQRYRCRCPPGWTGKDCATADPCASNPCANGGDCTPVDSTFICRCTPFFFGQTCKQDV
NECDAVPPRCKNDGICINEVGGYRCQCPPEYTGKHCENRYLPCNPSPCLNGGTCSPRGET
DYECSCVPGFSGKNCYNNIDDCPGHDCQNGGTCVDGVNTYNCQCKPEFTGQLCLDDVDEC
QLMPNACLNGGTCHNIYGGYQCVCVNGWSGDDCSENIDDCASAACYPGSTCHDRVASFFC
ECPHGRTGLLCQLEDACISNPCKKDSNCDTNPVTGKPICTCPSGYVGLSCDKDVDECSMG
SNPCEHGGKCINTNGSFQCMCQQGYMGTRCELDINECKSNPCKNEATCLDQIGDFQCICM
PGYEGEFCEIDTNECANSPCLNNGKCIDKISGFICQCPTGFTGNLCQIDIDECASTPCKN
GAKCTDGPNKYTCECTEGYTGRHCEVDVNECYSNPCHYGSCIDGLASFSCSCNPGFTGRL
CETNINECLSQPCRNGGTCLDRENAYICSCPKGTTGINCEVNIDDCKGNLCGYGTCIDKI
NGYECVCEPGYTGTMCNINIDECAINPCHNGGTCIDEINSFTCVCPDGYHDPTCFSQVNE
CLSNPCIHGHCEDKINDYKCLCDSGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCTC
RMGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCVLPYTGENCEILMAPCSSKPCK
HGGVCQESEDYLSFSCVCPEGWQGQTCEVDIKECVKNPCRNGATCQNTPGSYHCSCRPGF
SGRNCETNIDDCKPNPCSNGGICKDEVNSFLCTCLPGFRGPKCEEDINECESNPCKNGAN
CTDCVNSYTCTCPPGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPPGFTGSYCQ
HDINECDSKPCQNGGTCQDSYGTYKCTCPHGYTGFNCQSLVHWCDTSPCKNGGTCWQRGT
TYSCECETGWTGLYCDVPSVSCEVAAKQRGVAVSQLCQNSGQCLDAGNVHYCHCQAGYTG
SYCEEQVDECTPNPCQNGATCTDFLGGYSCECMQGFLGPNCSEEIDECFSQPCQNGGTCI
DLINTYKCSCPRGTQGVHCEINIDDCNPSTDPVTKEPKCFNNGRCVDGVGGYTCICPAGY
VGERCEGDVNECLSNPCDPRGTQSCIQLTNNYRCECRTGYTGQRCDQVFNGCKSKPCRNG
GTCAVASNTPHGFICNCPSGFTGSTCEYDSKTCGSLQCRNGGTCISGHNSPKCLCLPSFT
GPECQHPTDSACKSSPCYNGGTCEHAAEAPFYRCVCPANFNGLRCHILAADPEVACSIPQ
CEENKHNKHCDTICNNHACGWDNGDCSLSFDDPWKNCSAALQCWKYFNNGKCDSQCDNAG
CLYDGFDCQTLEGQCNPLYDQYCKDHYADSHCDQGCNNAECEWDGLDCANNMPEKLAVGQ
LVLVVHITPEHLLNNSFGFLRELSRVLRTNVIFRKDPKGETMVYPYYGNEHELKKYTVKR
SVDSWSEIPDKMLTVMKRSLYDVAGGRIRGRRELDHLQIKGSIVHLEMDNRQCFQQSNEC
FQSADDAAAFLGALESSSKLDVPFTIEAVYSGVDRQPSDGLYAIYLVLGGVGILAFLGVG
MVAARKRRHEHGRLWLPEGFKTTETSKKKRREPVGEDSVGLKPLKNTSDISLMDDNPNEW
GEDEHTDVKRFKQIDEQAVMDADDQTDHRQWTQQHLDAADLRIPSIAPTPPQGEIENDCM
DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGANLHNQTDRTGETA
LHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDAR
MHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVNNVEAAIVLLKNG
ANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANREITDHMDRLPRDIAQERMHHDIVR
LMDEYNLVRSPPMHGGSLSTTLSPPLCSPSGFLGSMKQPQPQSQGQGKKTRKPSHKGIGC
KDGKDMKVKKKNSQDGKSGNLLDSSAVLSPVDSLESPHGYVSDVASPPMMTSPFQQSPSV
SLNHLQGMSDPHMAVNHMVMPNKQELARMQFDPLPPRLTHLPVSGSGGQGPMNGQCDWLS
RMHSNINQAGQFNPMRGAPGGQGGMHQGGQHGMITTTLHNGHPNSSMSQMMTYQGMQNAR
LGPQSHMMQQQAQQMQQMQNLQQLQQQQQSIQLQHQNSNSANTQNFISGDLSSPELQQGT
GNSSMPIRTILPQETQIMSSSISQSMPSTQFLTPPSQHSYTGPIDNTPNHQVQVPDHPFL
TPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSMQSQIGHISEQFK
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgcatatttttttgttagtgaaactaactttcctgttgtcgctgataggaataacgcga
ggtctaagatgctccatgcccacagagtcatgtttgaaccaggggaagtgtgaatcaact
ccggatggcaatggagaatgcaaatgccgagatggatacgttgggagcaggtgccagttt
catgacccatgcaacaacgggccatgcatgaatggaggcacatgtcgtgccgtctccaag
ggaaacacggtggatttcaactgcacctgcagaattggctacaccgaccgtcgctgcatg
acacccatcaatatcgcttgtctcagctcgccgtgtcacaaaggaggtacctgtgagcca
gacggtccgcagaggtacaggtgccgatgcccacctgggtggacaggaaaagactgtgca
acagccgacccatgcgcctccaatccctgtgccaacggcggggattgcactccagttgat
tccaccttcatctgcagatgcaccccattcttctttggacaaacctgcaaacaggatgtc
aacgagtgtgacgccgtcccaccacggtgcaaaaatgacgggatatgcatcaatgaggtc
gggggctacagatgccagtgtcctccagagtatacagggaagcactgcgagaaccgctac
cttccatgcaacccctcgccctgcctgaatggaggtacctgcagcccgaggggagaaacc
gactacgaatgttcctgcgtgccaggattttctggtaaaaactgctacaataatatagat
gactgtccaggtcatgactgccagaatgggggcacgtgcgtggatggagtcaacacctac
aactgccagtgtaaaccagaatttacaggtcagctctgcctggatgatgttgatgagtgc
cagcttatgcccaatgcatgtctgaatggcggcacgtgccacaacatttacggcggctac
cagtgtgtgtgcgtgaacggctggtctggagacgactgcagcgagaatatcgacgactgc
gccagtgctgcctgctacccgggatctacctgccatgaccgcgtggcttcgttcttctgc
gaatgtcctcatggtcgtacaggtctgctgtgccagctagaggacgcctgcatcagtaac
ccgtgtaaaaaggactccaactgtgacaccaaccctgtcaccggaaaacctatttgtacc
tgcccttcaggatacgtcggtctttcctgcgataaggatgtagatgaatgctcaatgggt
tccaacccatgtgagcacggtgggaagtgcataaacaccaacggctcattccagtgcatg
tgccagcaggggtacatggggacacgctgtgagctggacatcaatgagtgcaaatcaaac
ccgtgtaagaatgaagccacctgcctggaccagataggagacttccaatgcatctgcatg
ccaggctacgagggggagttctgcgagatcgatacaaacgagtgcgccaacagcccctgc
ctgaacaacggcaagtgcatcgacaagatcagcggtttcatctgccagtgccccacaggc
tttactgggaatctttgccagatagacatagatgagtgtgccagcacaccctgcaaaaat
ggcgccaagtgcacagacgggcccaacaaatacacttgcgagtgcactgaaggttacact
gggaggcactgtgaggtcgacgtaaatgaatgctattccaatccttgtcactacggctcc
tgcatcgacgggctggcctcattcagctgcagctgcaaccccgggttcaccggcaggctg
tgtgagaccaacatcaatgagtgtctgagtcagccgtgcaggaacggaggcacctgcctg
gacagagagaatgcctacatctgcagctgccctaagggaaccacaggaatcaactgtgaa
gtcaacattgatgactgcaagggcaatctctgtggctatggaacctgcatcgacaagatc
aacggctatgagtgtgtctgtgaacctggctacactggtacaatgtgtaacatcaacatt
gacgagtgcgccatcaatccgtgccacaacggtggaacctgcatcgatgaaatcaacagt
ttcacctgtgtgtgtccggacggttaccacgatcccacctgcttctcccaagtcaacgag
tgtctcagcaacccctgcatccacggtcactgcgaagacaaaattaacgactataaatgc
ctgtgtgactccggctggagcgggaagaactgcgacatcaacaataacgagtgtgaatcc
aacccttgcatgaatggagggacttgcaaggacatgaccagcggttacgtttgcacctgt
cgtatgggtttcacaggaccaaactgccagacaaacatcaacgaatgcgcctccaacccc
tgcctgaaccagggcacatgcatcgacgatgttgcaggttacaagtgcaactgtgtcctg
ccttacacaggtgaaaactgtgaaatcctgatggccccttgtagctccaaaccctgtaag
catggaggagtgtgtcaggagtcagaagactacctgagcttttcctgtgtctgtcctgag
ggatggcaaggccaaacatgtgaggtggacatcaaagagtgtgtgaagaatccttgtcgc
aatggagcaacctgccagaatacaccaggcagctaccactgcagctgcagaccaggcttt
agtggacgcaactgtgagaccaacattgatgactgcaaacccaacccctgcagcaatgga
ggcatttgtaaggatgaggttaatagcttcctgtgtacctgcctgcctggattccgggga
ccaaagtgtgaagaagatatcaatgagtgtgagagcaatccgtgcaagaatggagccaac
tgcacagactgcgtgaacagctacacctgcacctgcccgcctggcttcagtgggatccac
tgtgaaaacaacactcctgactgcacagagagctcctgcttcaacggtggaacctgcgtg
gatggcataaacaccttcacctgtttatgcccaccgggattcactgggagctactgccag
catgatatcaacgagtgcgactctaaaccctgtcaaaatggcggcacctgtcaggacagt
tacggcacatacaagtgcacctgcccccatggttacacaggattcaattgtcagagcttg
gtacattggtgtgacacatctccctgtaaaaacggaggaacctgctggcagagagggacc
acctacagctgtgagtgtgagaccggctggacgggcctttactgtgacgtcccaagtgtt
tcctgtgaggttgcagccaaacaaagaggagttgcagtttcccaactttgtcaaaactcg
ggtcagtgtctggatgcgggaaacgtccactactgtcactgtcaggctggatacactggc
agctactgcgaggagcaggtggatgaatgcacacccaacccctgccagaacggagccacc
tgcacagactttctgggtggatactcctgtgagtgcatgcagggattcttggggcctaac
tgttctgaggagatcgatgagtgtttctcccagccgtgccagaatggggggacctgcatt
gacctgatcaatacctacaaatgctcttgtccccgaggaacccaaggcgtccactgtgag
atcaacatcgatgactgtaacccgtccactgaccccgtcaccaaagagccgaagtgcttc
aacaacggcaggtgtgtggatggagtgggaggctacacctgcatctgccctgctggttat
gtgggggagcgatgcgagggggatgtcaacgagtgtctgtccaacccctgtgaccctcgg
ggcacgcaaagctgcattcaactcaccaacaactaccgctgcgagtgtcgcaccggatac
acaggccagcgctgcgaccaagtgtttaatggctgtaaaagtaaaccttgccgcaatgga
ggaacatgtgctgtggccagtaacacgccacatggtttcatctgcaactgtccctctggc
ttcactggctccacgtgcgaatatgactccaaaacatgcggcagcctccaatgtcgcaac
ggaggcacctgcatttctggccacaacagcccaaagtgtttgtgtctgccttcgttcacc
gggcctgagtgtcagcaccccactgacagcgcgtgcaaatccagtccctgctacaacggg
ggcacgtgtgaacacgctgccgaggcgcctttctaccgctgcgtttgccccgccaacttc
aacggcctccgttgccacatcctggcggcggaccctgaggtggcgtgcagcatcccgcag
tgcgaggagaacaagcacaacaagcactgtgacacaatctgcaacaaccatgcgtgtggt
tgggacaacggcgactgctcgctcagcttcgacgacccgtggaagaactgctcagccgcg
ctgcagtgctggaagtacttcaacaatgggaagtgcgactcccagtgtgacaatgctgga
tgcctctacgacggctttgactgccaaactttggaaggacagtgcaacccgctgtatgac
cagtactgtaaagatcactatgcggacagccactgtgaccagggttgcaataatgctgag
tgcgagtgggacggcttggactgtgccaacaacatgccggagaagctcgcagtgggccaa
ctggttctagtcgtccacatcacccccgagcatctcctgaacaactccttcggcttcctg
cgcgagctgagccgcgtcctcagaaccaacgtgatattcaggaaggacccgaagggggag
acgatggtctacccatactatgggaacgagcatgagctgaagaagtacaccgttaagcga
tccgtggattcctggtctgagattcctgacaagatgctaactgtgatgaagaggagtctg
tatgacgtggcaggtggcaggatcagagggaggagggagctggatcatttgcaaatcaaa
ggctcaattgtccacttggagatggacaaccgtcagtgcttccagcagtccaacgagtgt
ttccagagcgctgatgatgctgctgcgttcctcggagctctggagtccagcagcaaactg
gatgttcctttcactattgaagctgtctatagcggcgttgaccggcagccttccgacgga
ctctacgcaatctatctggtcctgggcggcgtcgggatactggccttccttggagtggga
atggtggcagcccgaaagcggcgccatgagcacgggcgtctctggcttcccgagggcttc
aagaccacggagaccagcaagaagaaaagacgggagcctgttggagaggattcagttgga
ttgaagccactgaaaaacacctctgatatttctctgatggacgacaacccgaatgaatgg
ggagaggacgaacatacggatgtgaagcgattcaaacagattgatgagcaggctgtgatg
gacgccgacgaccagaccgaccaccgccagtggacccagcagcacctggacgccgccgat
ctccgtatcccctccatcgctcccactccccctcagggtgagattgaaaatgactgcatg
gatgtcaacgtgcgaggaccagatggattcactcccctgatgatcgcatcctgcagcggc
ggaggactagaaactggcaacagtgaggaagaggaggacgcctcggctaatgtcatcaac
gacttcatttatcagggcgctaacctccacaaccagactgatcgtaccggtgagacagcc
cttcatctggctgcccggtacgctcgctctgacgctgccaaacggctgctggaggccagc
gccgatgcaaacattcaggacaacatgggcaggacacctctgcatgctgcagtggccgct
gatgctcagggggtcttccagattctgataaggaaccgtgccacagatttggacgcccgc
atgcatgatggcactacacccctgatcttggctgccaggctggcagtggaaggcatggtg
gaggagcttattaactgtcacgcagatgtgaatgccatcgatgattttggaaaatcagcc
ctccactgggctgcagcagtcaataatgtggaggctgcgattgttctactcaagaatggt
gccaacaaggacatgcagaacaacaaggaggagacgcctctgttcttggctgccagagaa
ggaagctatgagactgctaaggtcttattggatcattttgccaacagggaaataaccgac
catatggaccggctccctagagacattgcacaggagaggatgcatcatgacattgtgagg
ctgatggacgagtacaacctggtacgaagtccccccatgcacggagggtctctgagcacc
acattgtctccccctctttgctcacccagtgggttccttggcagcatgaagcagcctcag
cctcaaagtcaaggccaggggaaaaaaacccgcaagcccagtcacaagggaatcggctgc
aaagatggcaaagacatgaaggtgaagaagaagaactctcaggacgggaagtctgggaac
ctcctggacagctcggccgttctgtcacctgtagactcattggagtctcctcacggatac
gtttctgatgtagcctcaccgcctatgatgacctcccccttccagcagtcgccatctgta
tcccttaaccatctgcaggggatgtctgaccctcatatggctgtaaaccacatggtgatg
ccaaacaagcaggagctagcccgcatgcagtttgacccactgccaccccgtttaacccac
ctaccagtctctggctccggcggtcagggtcccatgaatggccaatgtgactggctatcc
aggatgcacagcaacattaaccaggcaggtcagttcaaccccatgagaggcgcccctggg
ggccaaggaggtatgcaccaaggtgggcagcatgggatgatcacaactaccctgcataat
ggccaccccaactccagcatgtcgcagatgatgacctatcaggggatgcagaacgcccga
ctgggccctcagagccacatgatgcagcagcaggctcaacaaatgcagcaaatgcaaaac
cttcaacaacttcaacagcagcagcagagtatccagctgcagcaccagaactctaactca
gccaacacccagaacttcatcagcggggacctcagttccccagagctccagcagggaaca
ggtaattccagcatgcccatacgtaccatcctcccacaggaaacccagatcatgtcctcc
tccatcagtcagtccatgcccagcacccagttcctcaccccaccctcccagcacagctat
acgggccctatagacaacaccccaaaccatcaggtccaggtgcccgaccatccctttctg
accccgtcccctggctcccctgaccagtggtccagttcatctccccattccaacatgtcc
gactggtcagagggcatttcaagtccaccaacaagcatgcagtcccagattgggcatata
tcagaacagttcaaataa
DBGET
integrated database retrieval system
